BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024327
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Me...   159   3e-37
ref|XP_003605160.1| Pentatricopeptide repeat-containing protein ...   159   3e-37
ref|XP_002532710.1| n6-DNA-methyltransferase, putative [Ricinus ...   157   6e-37
gb|ACU24432.1| unknown [Glycine max]                                  155   3e-36
ref|XP_002297908.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34

>gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
            small; Tetratricopeptide-like helical [Medicago
            truncatula]
          Length = 971

 Score =  159 bits (401), Expect = 3e-37
 Identities = 80/132 (60%), Positives = 96/132 (72%), Gaps = 7/132 (5%)
 Frame = -3

Query: 376  EHNIDIDDFANQLSFPSS-------RTQNHDSEKVLSRMPSRIAQIKLVSGHPEVYEPCD 218
            E  +DID   + L    S       +  N ++ K   +  S+ AQI+LVS H EVYEPCD
Sbjct: 682  ERRLDIDQSDSALELIKSSYLHITIKLNNSENGKASFKDLSKTAQIRLVSSHNEVYEPCD 741

Query: 217  DSFALVDALLADRINLLEHRPTVCMEVGCGSGYVITSLAIMLGQEGDGHHYFATDINPHA 38
            DSFALVDALLADR NLLEH P +CME+GCGSGYVITSLA++LGQEG G +Y ATDINPHA
Sbjct: 742  DSFALVDALLADRTNLLEHHPALCMEIGCGSGYVITSLALILGQEGSGVNYIATDINPHA 801

Query: 37   VRVTHETLKAHG 2
            V+VT ET++AHG
Sbjct: 802  VKVTRETIEAHG 813


>ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355506215|gb|AES87357.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1026

 Score =  159 bits (401), Expect = 3e-37
 Identities = 80/132 (60%), Positives = 96/132 (72%), Gaps = 7/132 (5%)
 Frame = -3

Query: 376  EHNIDIDDFANQLSFPSS-------RTQNHDSEKVLSRMPSRIAQIKLVSGHPEVYEPCD 218
            E  +DID   + L    S       +  N ++ K   +  S+ AQI+LVS H EVYEPCD
Sbjct: 737  ERRLDIDQSDSALELIKSSYLHITIKLNNSENGKASFKDLSKTAQIRLVSSHNEVYEPCD 796

Query: 217  DSFALVDALLADRINLLEHRPTVCMEVGCGSGYVITSLAIMLGQEGDGHHYFATDINPHA 38
            DSFALVDALLADR NLLEH P +CME+GCGSGYVITSLA++LGQEG G +Y ATDINPHA
Sbjct: 797  DSFALVDALLADRTNLLEHHPALCMEIGCGSGYVITSLALILGQEGSGVNYIATDINPHA 856

Query: 37   VRVTHETLKAHG 2
            V+VT ET++AHG
Sbjct: 857  VKVTRETIEAHG 868


>ref|XP_002532710.1| n6-DNA-methyltransferase, putative [Ricinus communis]
           gi|223527556|gb|EEF29677.1| n6-DNA-methyltransferase,
           putative [Ricinus communis]
          Length = 256

 Score =  157 bits (398), Expect = 6e-37
 Identities = 76/94 (80%), Positives = 83/94 (88%)
 Frame = -3

Query: 283 MPSRIAQIKLVSGHPEVYEPCDDSFALVDALLADRINLLEHRPTVCMEVGCGSGYVITSL 104
           M SRIAQI+LVS HPEVYEPCDDSFALVDALLADRINLL+H P VC EVGCGSGYVITSL
Sbjct: 1   MSSRIAQIRLVSSHPEVYEPCDDSFALVDALLADRINLLDHNPKVCFEVGCGSGYVITSL 60

Query: 103 AIMLGQEGDGHHYFATDINPHAVRVTHETLKAHG 2
           A+ML Q+  G +Y ATD+NPHAVRVT ETL+AHG
Sbjct: 61  ALMLRQQIPGVYYIATDLNPHAVRVTRETLEAHG 94


>gb|ACU24432.1| unknown [Glycine max]
          Length = 234

 Score =  155 bits (392), Expect = 3e-36
 Identities = 75/91 (82%), Positives = 81/91 (89%)
 Frame = -3

Query: 274 RIAQIKLVSGHPEVYEPCDDSFALVDALLADRINLLEHRPTVCMEVGCGSGYVITSLAIM 95
           R AQI LVS H EVYEPCDDSFALVDALLADR NLLEH PT+CME+GCGSGYVITSLA++
Sbjct: 9   RTAQIHLVSSHQEVYEPCDDSFALVDALLADRNNLLEHHPTLCMEIGCGSGYVITSLALI 68

Query: 94  LGQEGDGHHYFATDINPHAVRVTHETLKAHG 2
           LGQE  G +Y ATDINPHAVRVTHETL+AHG
Sbjct: 69  LGQEVCGINYIATDINPHAVRVTHETLEAHG 99


>ref|XP_002297908.1| predicted protein [Populus trichocarpa] gi|222845166|gb|EEE82713.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  150 bits (378), Expect = 1e-34
 Identities = 71/98 (72%), Positives = 83/98 (84%)
 Frame = -3

Query: 298 KVLSRMPSRIAQIKLVSGHPEVYEPCDDSFALVDALLADRINLLEHRPTVCMEVGCGSGY 119
           +V  +M  + AQI+L+S HPEVYEPCDDSFALVDALLADR N+L+H P +C+EVGCGSGY
Sbjct: 1   QVAYKMSPKTAQIRLMSSHPEVYEPCDDSFALVDALLADRTNILDHCPRLCLEVGCGSGY 60

Query: 118 VITSLAIMLGQEGDGHHYFATDINPHAVRVTHETLKAH 5
           VI SLA+MLGQE  G +YFATDINPHA+RVT ETL AH
Sbjct: 61  VIASLALMLGQELPGVYYFATDINPHALRVTRETLDAH 98