BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024322
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026...    76   3e-12
sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related m...    76   3e-12
ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis ...    75   4e-12
ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula...    73   2e-11
gb|EEE67677.1| hypothetical protein OsJ_25316 [Oryza sativa Japo...    71   8e-11

>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
           helicase-like transcription factor-like protein
           [Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
           At5g05130 [Arabidopsis thaliana]
           gi|332003449|gb|AED90832.1| DNA/RNA helicase
           [Arabidopsis thaliana]
          Length = 862

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/51 (72%), Positives = 45/51 (88%)
 Frame = +1

Query: 61  KVNALLKLLLEDRQRDASTKSIVFSQFRKMLILLEEPLKASGFTILRLDGS 213
           KV+ALL LL+  RQ + +TKS+VFSQFRKML+LLE PLKA+GFTILRLDG+
Sbjct: 689 KVSALLSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGA 739


>sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 1; Short=SMARCA3-like protein 1
           gi|10178052|dbj|BAB11535.1| helicase-like transcription
           factor-like protein [Arabidopsis thaliana]
          Length = 881

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/51 (72%), Positives = 45/51 (88%)
 Frame = +1

Query: 61  KVNALLKLLLEDRQRDASTKSIVFSQFRKMLILLEEPLKASGFTILRLDGS 213
           KV+ALL LL+  RQ + +TKS+VFSQFRKML+LLE PLKA+GFTILRLDG+
Sbjct: 708 KVSALLSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGA 758


>ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316976|gb|EFH47398.1| SNF2 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 861

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/51 (72%), Positives = 44/51 (86%)
 Frame = +1

Query: 61  KVNALLKLLLEDRQRDASTKSIVFSQFRKMLILLEEPLKASGFTILRLDGS 213
           KV+ALL LL+  RQ   +TKS+VFSQFRKML+LLE PLKA+GFTILRLDG+
Sbjct: 688 KVSALLSLLIASRQESPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGA 738


>ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula]
           gi|124360542|gb|ABN08552.1| SNF2-related; Zinc finger,
           RING-type; ATP-requiring DNA helicase RecQ [Medicago
           truncatula] gi|355499950|gb|AES81153.1| DNA repair
           protein RAD5 [Medicago truncatula]
          Length = 844

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/51 (68%), Positives = 44/51 (86%)
 Frame = +1

Query: 61  KVNALLKLLLEDRQRDASTKSIVFSQFRKMLILLEEPLKASGFTILRLDGS 213
           KV+ L+KLL E R ++ +TKS+VFSQFRKML+LLEEPLKA+GF  LRLDG+
Sbjct: 671 KVSTLIKLLTESRDQNPATKSVVFSQFRKMLLLLEEPLKAAGFKTLRLDGT 721


>gb|EEE67677.1| hypothetical protein OsJ_25316 [Oryza sativa Japonica Group]
          Length = 641

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/51 (70%), Positives = 41/51 (80%)
 Frame = +1

Query: 61  KVNALLKLLLEDRQRDASTKSIVFSQFRKMLILLEEPLKASGFTILRLDGS 213
           KV ALLKLL   +  D  +KS++FSQFRKMLILLE PLKA+GF ILRLDGS
Sbjct: 466 KVQALLKLLRRSQSEDPLSKSVIFSQFRKMLILLEGPLKAAGFNILRLDGS 516