BLASTX nr result

ID: Coptis23_contig00024313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024313
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308884.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002871077.1| ferredoxin-dependent glutamate synthase 1 [A...    65   7e-09
emb|CBI30117.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_002267056.1| PREDICTED: ferredoxin-dependent glutamate sy...    64   1e-08
ref|XP_002322623.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|XP_002308884.1| predicted protein [Populus trichocarpa] gi|222854860|gb|EEE92407.1|
            predicted protein [Populus trichocarpa]
          Length = 1628

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/32 (93%), Positives = 31/32 (96%)
 Frame = +2

Query: 107  KGMAGGELVVTPVETTGFVPEEATIVGNTCLY 202
            KGMAGGELVVTPVE TGFVPE+ATIVGNTCLY
Sbjct: 1440 KGMAGGELVVTPVENTGFVPEDATIVGNTCLY 1471


>ref|XP_002871077.1| ferredoxin-dependent glutamate synthase 1 [Arabidopsis lyrata subsp.
            lyrata] gi|297316914|gb|EFH47336.1| ferredoxin-dependent
            glutamate synthase 1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1606

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +2

Query: 107  KGMAGGELVVTPVETTGFVPEEATIVGNTCLY 202
            KGMAGGE+VVTPV+T GFVPEEATIVGNTCLY
Sbjct: 1419 KGMAGGEIVVTPVDTIGFVPEEATIVGNTCLY 1450


>emb|CBI30117.3| unnamed protein product [Vitis vinifera]
          Length = 1656

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +2

Query: 107  KGMAGGELVVTPVETTGFVPEEATIVGNTCLY 202
            KGMAGGELVVTPVE TGF+PE+ATIVGNTCLY
Sbjct: 1469 KGMAGGELVVTPVEDTGFLPEDATIVGNTCLY 1500


>ref|XP_002267056.1| PREDICTED: ferredoxin-dependent glutamate synthase 1, chloroplastic
            [Vitis vinifera]
          Length = 1629

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +2

Query: 107  KGMAGGELVVTPVETTGFVPEEATIVGNTCLY 202
            KGMAGGELVVTPVE TGF+PE+ATIVGNTCLY
Sbjct: 1442 KGMAGGELVVTPVEDTGFLPEDATIVGNTCLY 1473


>ref|XP_002322623.1| predicted protein [Populus trichocarpa] gi|222867253|gb|EEF04384.1|
            predicted protein [Populus trichocarpa]
          Length = 1491

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = +2

Query: 107  KGMAGGELVVTPVETTGFVPEEATIVGNTCLY 202
            KGMAGGELVVTPVE TGFVPE+A IVGNTCLY
Sbjct: 1303 KGMAGGELVVTPVENTGFVPEDAAIVGNTCLY 1334


Top