BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024307
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi...   463   e-128
emb|CBI23556.3| unnamed protein product [Vitis vinifera]              463   e-128
ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containi...   462   e-128
ref|XP_002321443.1| predicted protein [Populus trichocarpa] gi|2...   429   e-118
ref|XP_002522011.1| pentatricopeptide repeat-containing protein,...   413   e-113

>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
            chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  463 bits (1191), Expect = e-128
 Identities = 221/313 (70%), Positives = 259/313 (82%)
 Frame = -3

Query: 941  SKCGDWETANLIFEEMGKDRDLVSWSAMISCFANNHRKFEAVTLFYDMLELGHYPNEFCF 762
            SKCGD ETA LIFE MG  RDLVSWSAM+SCFANN  +++A+  F DMLELG YPNE+CF
Sbjct: 72   SKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCF 131

Query: 761  TAVIRACRDCDNAWIGRVVFGSVLKSGYFESNLCVGCELIELFTKGMGDLDSARKVFDRM 582
             AVIRAC + + AW+G +++G V+K+GY E+++CVGCELI++F KG GDL SA KVFD+M
Sbjct: 132  AAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKM 191

Query: 581  PERNAVTWTLMITRYAQCGLGKDAVDLFLEMELSEFVPDSFTLSSVISACAELESFQLGQ 402
            PERN VTWTLMITR+AQ G  +DA+DLFL+MELS +VPD FT SSV+SAC EL    LG+
Sbjct: 192  PERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGK 251

Query: 401  QLHSRVIRSGLALDVCVGCSIVDMYAKCATGGSFDESRKVFDRMPNHNVMSWTAIITGYV 222
            QLHSRVIR GLALDVCVGCS+VDMYAKCA  GS D+SRKVF++MP HNVMSWTAIIT YV
Sbjct: 252  QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYV 311

Query: 221  QCGGHDYEAIYLFCEMIHGPVRPNHFTFSSVLKACANLSDSKRGEQVYAHVVKSGFASVN 42
            Q G  D EAI LFC+MI G +RPNHF+FSSVLKAC NLSD   GEQVY++ VK G ASVN
Sbjct: 312  QSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVN 371

Query: 41   CVGNSLISMFAQS 3
            CVGNSLISM+A+S
Sbjct: 372  CVGNSLISMYARS 384



 Score =  199 bits (506), Expect = 8e-49
 Identities = 109/312 (34%), Positives = 188/312 (60%), Gaps = 3/312 (0%)
 Frame = -3

Query: 932  GDWETANLIFEEMGKDRDLVSWSAMISCFANNHRKFEAVTLFYDMLELGHYPNEFCFTAV 753
            GD  +A  +F++M  +R+LV+W+ MI+ FA      +A+ LF DM   G+ P+ F +++V
Sbjct: 179  GDLGSAYKVFDKM-PERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSV 237

Query: 752  IRACRDCDNAWIGRVVFGSVLKSGYFESNLCVGCELIELFTK--GMGDLDSARKVFDRMP 579
            + AC +     +G+ +   V++ G    ++CVGC L++++ K    G +D +RKVF++MP
Sbjct: 238  LSACTELGLLALGKQLHSRVIRLG-LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 296

Query: 578  ERNAVTWTLMITRYAQCG-LGKDAVDLFLEMELSEFVPDSFTLSSVISACAELESFQLGQ 402
            E N ++WT +IT Y Q G   K+A++LF +M      P+ F+ SSV+ AC  L     G+
Sbjct: 297  EHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGE 356

Query: 401  QLHSRVIRSGLALDVCVGCSIVDMYAKCATGGSFDESRKVFDRMPNHNVMSWTAIITGYV 222
            Q++S  ++ G+A   CVG S++ MYA+    G  +++RK FD +   N++S+ AI+ GY 
Sbjct: 357  QVYSYAVKLGIASVNCVGNSLISMYAR---SGRMEDARKAFDILFEKNLVSYNAIVDGYA 413

Query: 221  QCGGHDYEAIYLFCEMIHGPVRPNHFTFSSVLKACANLSDSKRGEQVYAHVVKSGFASVN 42
            +      EA  LF E+    +  + FTF+S+L   A++    +GEQ++  ++K G+ S  
Sbjct: 414  K-NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 472

Query: 41   CVGNSLISMFAQ 6
            C+ N+LISM+++
Sbjct: 473  CICNALISMYSR 484



 Score =  150 bits (378), Expect = 5e-34
 Identities = 86/297 (28%), Positives = 170/297 (57%), Gaps = 4/297 (1%)
 Frame = -3

Query: 941  SKC---GDWETANLIFEEMGKDRDLVSWSAMISCFANNHR-KFEAVTLFYDMLELGHYPN 774
            +KC   G  + +  +FE+M  + +++SW+A+I+ +  +     EA+ LF  M+     PN
Sbjct: 277  AKCAADGSVDDSRKVFEQM-PEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPN 335

Query: 773  EFCFTAVIRACRDCDNAWIGRVVFGSVLKSGYFESNLCVGCELIELFTKGMGDLDSARKV 594
             F F++V++AC +  + + G  V+   +K G    N CVG  LI ++ +  G ++ ARK 
Sbjct: 336  HFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVN-CVGNSLISMYARS-GRMEDARKA 393

Query: 593  FDRMPERNAVTWTLMITRYAQCGLGKDAVDLFLEMELSEFVPDSFTLSSVISACAELESF 414
            FD + E+N V++  ++  YA+    ++A  LF E+  +     +FT +S++S  A + + 
Sbjct: 394  FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 453

Query: 413  QLGQQLHSRVIRSGLALDVCVGCSIVDMYAKCATGGSFDESRKVFDRMPNHNVMSWTAII 234
              G+Q+H R+++ G   + C+  +++ MY++C   G+ + + +VF+ M + NV+SWT++I
Sbjct: 454  GKGEQIHGRLLKGGYKSNQCICNALISMYSRC---GNIEAAFQVFNEMEDRNVISWTSMI 510

Query: 233  TGYVQCGGHDYEAIYLFCEMIHGPVRPNHFTFSSVLKACANLSDSKRGEQVYAHVVK 63
            TG+ +  G    A+ +F +M+    +PN  T+ +VL AC+++     G++ +  + K
Sbjct: 511  TGFAK-HGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYK 566



 Score =  100 bits (250), Expect = 4e-19
 Identities = 52/157 (33%), Positives = 98/157 (62%), Gaps = 2/157 (1%)
 Frame = -3

Query: 470 PDSFTLSSVISACAELESFQLGQQLHSRVIRSGLALDVCVGCSIVDMYAKCATGGSFDES 291
           PD  T S ++ +C    +FQLG+ +H ++++SGL LD  V  +++ +Y+KC   G  + +
Sbjct: 24  PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKC---GDTETA 80

Query: 290 RKVFDRMPN-HNVMSWTAIITGYVQCGGHDYEAIYLFCEMIHGPVRPNHFTFSSVLKACA 114
           R +F+ M N  +++SW+A+++ +      +++AI+ F +M+     PN + F++V++AC+
Sbjct: 81  RLIFEGMGNKRDLVSWSAMVSCFAN-NSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACS 139

Query: 113 NLSDSKRGEQVYAHVVKSGFASVN-CVGNSLISMFAQ 6
           N + +  GE +Y  VVK+G+   + CVG  LI MF +
Sbjct: 140 NANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVK 176


>emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  463 bits (1191), Expect = e-128
 Identities = 221/313 (70%), Positives = 259/313 (82%)
 Frame = -3

Query: 941  SKCGDWETANLIFEEMGKDRDLVSWSAMISCFANNHRKFEAVTLFYDMLELGHYPNEFCF 762
            SKCGD ETA LIFE MG  RDLVSWSAM+SCFANN  +++A+  F DMLELG YPNE+CF
Sbjct: 90   SKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCF 149

Query: 761  TAVIRACRDCDNAWIGRVVFGSVLKSGYFESNLCVGCELIELFTKGMGDLDSARKVFDRM 582
             AVIRAC + + AW+G +++G V+K+GY E+++CVGCELI++F KG GDL SA KVFD+M
Sbjct: 150  AAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKM 209

Query: 581  PERNAVTWTLMITRYAQCGLGKDAVDLFLEMELSEFVPDSFTLSSVISACAELESFQLGQ 402
            PERN VTWTLMITR+AQ G  +DA+DLFL+MELS +VPD FT SSV+SAC EL    LG+
Sbjct: 210  PERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGK 269

Query: 401  QLHSRVIRSGLALDVCVGCSIVDMYAKCATGGSFDESRKVFDRMPNHNVMSWTAIITGYV 222
            QLHSRVIR GLALDVCVGCS+VDMYAKCA  GS D+SRKVF++MP HNVMSWTAIIT YV
Sbjct: 270  QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYV 329

Query: 221  QCGGHDYEAIYLFCEMIHGPVRPNHFTFSSVLKACANLSDSKRGEQVYAHVVKSGFASVN 42
            Q G  D EAI LFC+MI G +RPNHF+FSSVLKAC NLSD   GEQVY++ VK G ASVN
Sbjct: 330  QSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVN 389

Query: 41   CVGNSLISMFAQS 3
            CVGNSLISM+A+S
Sbjct: 390  CVGNSLISMYARS 402



 Score =  199 bits (506), Expect = 8e-49
 Identities = 109/312 (34%), Positives = 188/312 (60%), Gaps = 3/312 (0%)
 Frame = -3

Query: 932  GDWETANLIFEEMGKDRDLVSWSAMISCFANNHRKFEAVTLFYDMLELGHYPNEFCFTAV 753
            GD  +A  +F++M  +R+LV+W+ MI+ FA      +A+ LF DM   G+ P+ F +++V
Sbjct: 197  GDLGSAYKVFDKM-PERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSV 255

Query: 752  IRACRDCDNAWIGRVVFGSVLKSGYFESNLCVGCELIELFTK--GMGDLDSARKVFDRMP 579
            + AC +     +G+ +   V++ G    ++CVGC L++++ K    G +D +RKVF++MP
Sbjct: 256  LSACTELGLLALGKQLHSRVIRLG-LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 314

Query: 578  ERNAVTWTLMITRYAQCG-LGKDAVDLFLEMELSEFVPDSFTLSSVISACAELESFQLGQ 402
            E N ++WT +IT Y Q G   K+A++LF +M      P+ F+ SSV+ AC  L     G+
Sbjct: 315  EHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGE 374

Query: 401  QLHSRVIRSGLALDVCVGCSIVDMYAKCATGGSFDESRKVFDRMPNHNVMSWTAIITGYV 222
            Q++S  ++ G+A   CVG S++ MYA+    G  +++RK FD +   N++S+ AI+ GY 
Sbjct: 375  QVYSYAVKLGIASVNCVGNSLISMYAR---SGRMEDARKAFDILFEKNLVSYNAIVDGYA 431

Query: 221  QCGGHDYEAIYLFCEMIHGPVRPNHFTFSSVLKACANLSDSKRGEQVYAHVVKSGFASVN 42
            +      EA  LF E+    +  + FTF+S+L   A++    +GEQ++  ++K G+ S  
Sbjct: 432  K-NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 490

Query: 41   CVGNSLISMFAQ 6
            C+ N+LISM+++
Sbjct: 491  CICNALISMYSR 502



 Score =  150 bits (378), Expect = 5e-34
 Identities = 86/297 (28%), Positives = 170/297 (57%), Gaps = 4/297 (1%)
 Frame = -3

Query: 941  SKC---GDWETANLIFEEMGKDRDLVSWSAMISCFANNHR-KFEAVTLFYDMLELGHYPN 774
            +KC   G  + +  +FE+M  + +++SW+A+I+ +  +     EA+ LF  M+     PN
Sbjct: 295  AKCAADGSVDDSRKVFEQM-PEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPN 353

Query: 773  EFCFTAVIRACRDCDNAWIGRVVFGSVLKSGYFESNLCVGCELIELFTKGMGDLDSARKV 594
             F F++V++AC +  + + G  V+   +K G    N CVG  LI ++ +  G ++ ARK 
Sbjct: 354  HFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVN-CVGNSLISMYARS-GRMEDARKA 411

Query: 593  FDRMPERNAVTWTLMITRYAQCGLGKDAVDLFLEMELSEFVPDSFTLSSVISACAELESF 414
            FD + E+N V++  ++  YA+    ++A  LF E+  +     +FT +S++S  A + + 
Sbjct: 412  FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 471

Query: 413  QLGQQLHSRVIRSGLALDVCVGCSIVDMYAKCATGGSFDESRKVFDRMPNHNVMSWTAII 234
              G+Q+H R+++ G   + C+  +++ MY++C   G+ + + +VF+ M + NV+SWT++I
Sbjct: 472  GKGEQIHGRLLKGGYKSNQCICNALISMYSRC---GNIEAAFQVFNEMEDRNVISWTSMI 528

Query: 233  TGYVQCGGHDYEAIYLFCEMIHGPVRPNHFTFSSVLKACANLSDSKRGEQVYAHVVK 63
            TG+ +  G    A+ +F +M+    +PN  T+ +VL AC+++     G++ +  + K
Sbjct: 529  TGFAK-HGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYK 584



 Score =  100 bits (250), Expect = 4e-19
 Identities = 52/157 (33%), Positives = 98/157 (62%), Gaps = 2/157 (1%)
 Frame = -3

Query: 470 PDSFTLSSVISACAELESFQLGQQLHSRVIRSGLALDVCVGCSIVDMYAKCATGGSFDES 291
           PD  T S ++ +C    +FQLG+ +H ++++SGL LD  V  +++ +Y+KC   G  + +
Sbjct: 42  PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKC---GDTETA 98

Query: 290 RKVFDRMPN-HNVMSWTAIITGYVQCGGHDYEAIYLFCEMIHGPVRPNHFTFSSVLKACA 114
           R +F+ M N  +++SW+A+++ +      +++AI+ F +M+     PN + F++V++AC+
Sbjct: 99  RLIFEGMGNKRDLVSWSAMVSCFAN-NSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACS 157

Query: 113 NLSDSKRGEQVYAHVVKSGFASVN-CVGNSLISMFAQ 6
           N + +  GE +Y  VVK+G+   + CVG  LI MF +
Sbjct: 158 NANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVK 194


>ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
            chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  462 bits (1189), Expect = e-128
 Identities = 221/313 (70%), Positives = 258/313 (82%)
 Frame = -3

Query: 941  SKCGDWETANLIFEEMGKDRDLVSWSAMISCFANNHRKFEAVTLFYDMLELGHYPNEFCF 762
            SKCGD ETA LIFE MG  RDLVSWSAM+SCFANN  + +A+  F DMLELG YPNE+CF
Sbjct: 121  SKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMELQAIWTFLDMLELGFYPNEYCF 180

Query: 761  TAVIRACRDCDNAWIGRVVFGSVLKSGYFESNLCVGCELIELFTKGMGDLDSARKVFDRM 582
             AVIRAC + ++AW+G +++G V+K+GY E+++CVGCELI++F KG GDL SA KVFD+M
Sbjct: 181  AAVIRACSNANHAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKM 240

Query: 581  PERNAVTWTLMITRYAQCGLGKDAVDLFLEMELSEFVPDSFTLSSVISACAELESFQLGQ 402
            PERN VTWTLMITR+AQ G  +DA+DLFL+MELS +VPD FT SSV+SAC EL    LG+
Sbjct: 241  PERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGK 300

Query: 401  QLHSRVIRSGLALDVCVGCSIVDMYAKCATGGSFDESRKVFDRMPNHNVMSWTAIITGYV 222
            QLHSRVIR GLALDVCVGCS+VDMYAKCA  GS D+SRKVF+RMP HNVMSWTAIIT YV
Sbjct: 301  QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFERMPEHNVMSWTAIITAYV 360

Query: 221  QCGGHDYEAIYLFCEMIHGPVRPNHFTFSSVLKACANLSDSKRGEQVYAHVVKSGFASVN 42
            Q G  D EAI LFC+MI G + PNHF+FSSVLKAC NLSD   GEQVY++ VK G ASVN
Sbjct: 361  QSGECDKEAIELFCKMISGHIWPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVN 420

Query: 41   CVGNSLISMFAQS 3
            CVGNSLISM+A+S
Sbjct: 421  CVGNSLISMYARS 433



 Score =  172 bits (435), Expect = 1e-40
 Identities = 98/276 (35%), Positives = 163/276 (59%), Gaps = 3/276 (1%)
 Frame = -3

Query: 932  GDWETANLIFEEMGKDRDLVSWSAMISCFANNHRKFEAVTLFYDMLELGHYPNEFCFTAV 753
            GD  +A  +F++M  +R+LV+W+ MI+ FA      +A+ LF DM   G+ P+ F +++V
Sbjct: 228  GDLGSAYKVFDKM-PERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSV 286

Query: 752  IRACRDCDNAWIGRVVFGSVLKSGYFESNLCVGCELIELFTK--GMGDLDSARKVFDRMP 579
            + AC +     +G+ +   V++ G    ++CVGC L++++ K    G +D +RKVF+RMP
Sbjct: 287  LSACTELGLLALGKQLHSRVIRLG-LALDVCVGCSLVDMYAKCAADGSVDDSRKVFERMP 345

Query: 578  ERNAVTWTLMITRYAQCG-LGKDAVDLFLEMELSEFVPDSFTLSSVISACAELESFQLGQ 402
            E N ++WT +IT Y Q G   K+A++LF +M      P+ F+ SSV+ AC  L     G+
Sbjct: 346  EHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIWPNHFSFSSVLKACGNLSDPYTGE 405

Query: 401  QLHSRVIRSGLALDVCVGCSIVDMYAKCATGGSFDESRKVFDRMPNHNVMSWTAIITGYV 222
            Q++S  ++ G+A   CVG S++ MYA+    G  +++RK FD +   N++S+ AI+ GY 
Sbjct: 406  QVYSYAVKLGIASVNCVGNSLISMYAR---SGRMEDARKAFDILFEKNLVSYNAIVDGYA 462

Query: 221  QCGGHDYEAIYLFCEMIHGPVRPNHFTFSSVLKACA 114
            +      EA  LF E+    +  + FTF+S+L   A
Sbjct: 463  K-NLKSEEAFLLFNEIADTGIGISAFTFASLLSGAA 497



 Score =  100 bits (249), Expect = 5e-19
 Identities = 52/157 (33%), Positives = 97/157 (61%), Gaps = 2/157 (1%)
 Frame = -3

Query: 470 PDSFTLSSVISACAELESFQLGQQLHSRVIRSGLALDVCVGCSIVDMYAKCATGGSFDES 291
           PD  T S ++ +C    +FQLG+ +H ++++SGL LD  V  +++ +Y+KC   G  + +
Sbjct: 73  PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKC---GDTETA 129

Query: 290 RKVFDRMPN-HNVMSWTAIITGYVQCGGHDYEAIYLFCEMIHGPVRPNHFTFSSVLKACA 114
           R +F+ M N  +++SW+A+++ +      + +AI+ F +M+     PN + F++V++AC+
Sbjct: 130 RLIFEGMGNKRDLVSWSAMVSCFAN-NSMELQAIWTFLDMLELGFYPNEYCFAAVIRACS 188

Query: 113 NLSDSKRGEQVYAHVVKSGFASVN-CVGNSLISMFAQ 6
           N + +  GE +Y  VVK+G+   + CVG  LI MF +
Sbjct: 189 NANHAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVK 225



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 52/175 (29%), Positives = 97/175 (55%), Gaps = 4/175 (2%)
 Frame = -3

Query: 941 SKC---GDWETANLIFEEMGKDRDLVSWSAMISCFANNHR-KFEAVTLFYDMLELGHYPN 774
           +KC   G  + +  +FE M  + +++SW+A+I+ +  +     EA+ LF  M+    +PN
Sbjct: 326 AKCAADGSVDDSRKVFERM-PEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIWPN 384

Query: 773 EFCFTAVIRACRDCDNAWIGRVVFGSVLKSGYFESNLCVGCELIELFTKGMGDLDSARKV 594
            F F++V++AC +  + + G  V+   +K G    N CVG  LI ++ +  G ++ ARK 
Sbjct: 385 HFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVN-CVGNSLISMYARS-GRMEDARKA 442

Query: 593 FDRMPERNAVTWTLMITRYAQCGLGKDAVDLFLEMELSEFVPDSFTLSSVISACA 429
           FD + E+N V++  ++  YA+    ++A  LF E+  +     +FT +S++S  A
Sbjct: 443 FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAA 497


>ref|XP_002321443.1| predicted protein [Populus trichocarpa] gi|222868439|gb|EEF05570.1|
           predicted protein [Populus trichocarpa]
          Length = 723

 Score =  429 bits (1103), Expect = e-118
 Identities = 204/297 (68%), Positives = 243/297 (81%)
 Frame = -3

Query: 896 MGKDRDLVSWSAMISCFANNHRKFEAVTLFYDMLELGHYPNEFCFTAVIRACRDCDNAWI 717
           MG  RDLVSWSA+ISC+ANN + FEA++ F+DMLE G YPNE+CFT V RAC + +N  +
Sbjct: 1   MGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISL 60

Query: 716 GRVVFGSVLKSGYFESNLCVGCELIELFTKGMGDLDSARKVFDRMPERNAVTWTLMITRY 537
           G+++FG +LK+GYFES++CVGC LI++F KG GDL+SA KVFDRMP+RN VTWTLMITR+
Sbjct: 61  GKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRF 120

Query: 536 AQCGLGKDAVDLFLEMELSEFVPDSFTLSSVISACAELESFQLGQQLHSRVIRSGLALDV 357
            Q G  +DAVDLFL+M LS +VPD FTLS V+SACAE+    LG+Q H  V++SGL LDV
Sbjct: 121 QQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDV 180

Query: 356 CVGCSIVDMYAKCATGGSFDESRKVFDRMPNHNVMSWTAIITGYVQCGGHDYEAIYLFCE 177
           CVGCS+VDMYAKC   GS D++RKVFDRMP HNVMSWTAIITGYVQ GG D EAI LF E
Sbjct: 181 CVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLE 240

Query: 176 MIHGPVRPNHFTFSSVLKACANLSDSKRGEQVYAHVVKSGFASVNCVGNSLISMFAQ 6
           M+ G V+PNHFTFSSVLKACANLSD   GEQVYA VVK   AS+NCVGNSLISM+++
Sbjct: 241 MVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSR 297



 Score =  211 bits (537), Expect = 2e-52
 Identities = 118/312 (37%), Positives = 191/312 (61%), Gaps = 3/312 (0%)
 Frame = -3

Query: 932  GDWETANLIFEEMGKDRDLVSWSAMISCFANNHRKFEAVTLFYDMLELGHYPNEFCFTAV 753
            GD E+A  +F+ M  DR++V+W+ MI+ F       +AV LF DM+  G+ P+ F  + V
Sbjct: 93   GDLESAYKVFDRM-PDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGV 151

Query: 752  IRACRDCDNAWIGRVVFGSVLKSGYFESNLCVGCELIELFTKGMGD--LDSARKVFDRMP 579
            + AC +     +GR     V+KSG  + ++CVGC L++++ K + D  +D ARKVFDRMP
Sbjct: 152  VSACAEMGLLSLGRQFHCLVMKSG-LDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMP 210

Query: 578  ERNAVTWTLMITRYAQCG-LGKDAVDLFLEMELSEFVPDSFTLSSVISACAELESFQLGQ 402
              N ++WT +IT Y Q G   ++A++LFLEM   +  P+ FT SSV+ ACA L    LG+
Sbjct: 211  VHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGE 270

Query: 401  QLHSRVIRSGLALDVCVGCSIVDMYAKCATGGSFDESRKVFDRMPNHNVMSWTAIITGYV 222
            Q+++ V++  LA   CVG S++ MY++C   G+ + +RK FD +   N++S+  I+  Y 
Sbjct: 271  QVYALVVKMRLASINCVGNSLISMYSRC---GNMENARKAFDVLFEKNLVSYNTIVNAYA 327

Query: 221  QCGGHDYEAIYLFCEMIHGPVRPNHFTFSSVLKACANLSDSKRGEQVYAHVVKSGFASVN 42
            +    + EA  LF E+       N FTF+S+L   +++    +GEQ+++ ++KSGF S  
Sbjct: 328  KSLNSE-EAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNL 386

Query: 41   CVGNSLISMFAQ 6
             + N+LISM+++
Sbjct: 387  HICNALISMYSR 398



 Score =  154 bits (389), Expect = 3e-35
 Identities = 87/282 (30%), Positives = 172/282 (60%), Gaps = 4/282 (1%)
 Frame = -3

Query: 941  SKC---GDWETANLIFEEMGKDRDLVSWSAMISCFANNHR-KFEAVTLFYDMLELGHYPN 774
            +KC   G  + A  +F+ M    +++SW+A+I+ +  +     EA+ LF +M++    PN
Sbjct: 191  AKCVADGSVDDARKVFDRMPV-HNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPN 249

Query: 773  EFCFTAVIRACRDCDNAWIGRVVFGSVLKSGYFESNLCVGCELIELFTKGMGDLDSARKV 594
             F F++V++AC +  + W+G  V+  V+K      N CVG  LI ++++  G++++ARK 
Sbjct: 250  HFTFSSVLKACANLSDIWLGEQVYALVVKMRLASIN-CVGNSLISMYSR-CGNMENARKA 307

Query: 593  FDRMPERNAVTWTLMITRYAQCGLGKDAVDLFLEMELSEFVPDSFTLSSVISACAELESF 414
            FD + E+N V++  ++  YA+    ++A +LF E+E +    ++FT +S++S  + + + 
Sbjct: 308  FDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAI 367

Query: 413  QLGQQLHSRVIRSGLALDVCVGCSIVDMYAKCATGGSFDESRKVFDRMPNHNVMSWTAII 234
              G+Q+HSR+++SG   ++ +  +++ MY++C   G+ + + +VF+ M + NV+SWT++I
Sbjct: 368  GKGEQIHSRILKSGFKSNLHICNALISMYSRC---GNIEAAFQVFNEMGDGNVISWTSMI 424

Query: 233  TGYVQCGGHDYEAIYLFCEMIHGPVRPNHFTFSSVLKACANL 108
            TG+ +  G    A+  F +M+   V PN  T+ +VL AC+++
Sbjct: 425  TGFAK-HGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHV 465


>ref|XP_002522011.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538815|gb|EEF40415.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 585

 Score =  413 bits (1061), Expect = e-113
 Identities = 197/312 (63%), Positives = 243/312 (77%)
 Frame = -3

Query: 941  SKCGDWETANLIFEEMGKDRDLVSWSAMISCFANNHRKFEAVTLFYDMLELGHYPNEFCF 762
            SKCG+  +AN IF  MG  RDLVSWSA+ISC+A N  +F+A+ ++ DML  G +PNE+C+
Sbjct: 121  SKCGELNSANDIFISMGNKRDLVSWSALISCYATNGLEFDAIRVYIDMLVSGFFPNEYCY 180

Query: 761  TAVIRACRDCDNAWIGRVVFGSVLKSGYFESNLCVGCELIELFTKGMGDLDSARKVFDRM 582
            +AVI++C + +N   G ++FGS++K GY  S++CVGC LI+++ KG GD++ A KVFD M
Sbjct: 181  SAVIKSCSNRENFSYGEIIFGSLIKCGYLNSHVCVGCALIDMYAKGCGDVEGACKVFDNM 240

Query: 581  PERNAVTWTLMITRYAQCGLGKDAVDLFLEMELSEFVPDSFTLSSVISACAELESFQLGQ 402
             ERN VTWTLMI+R+ Q G  +DA+DLF  M  S F+PD++TLS V+SACAEL    LG+
Sbjct: 241  SERNIVTWTLMISRFQQLGYYRDAIDLFNHMIFSGFMPDNYTLSGVVSACAELGLLSLGK 300

Query: 401  QLHSRVIRSGLALDVCVGCSIVDMYAKCATGGSFDESRKVFDRMPNHNVMSWTAIITGYV 222
            +LHS  I+SGL  DVCVGCS+VDMYAKCA  GS D+SRKVFDRM NHNVMSWTAIITGYV
Sbjct: 301  ELHSWAIKSGLVYDVCVGCSLVDMYAKCAVDGSLDDSRKVFDRMTNHNVMSWTAIITGYV 360

Query: 221  QCGGHDYEAIYLFCEMIHGPVRPNHFTFSSVLKACANLSDSKRGEQVYAHVVKSGFASVN 42
            Q G  D EA  LF EMI G V+PNHFTFSS+LKACANLSD   GEQ YAH VK GFASVN
Sbjct: 361  QNGRSDMEATELFLEMIEGHVKPNHFTFSSILKACANLSDLHLGEQFYAHAVKLGFASVN 420

Query: 41   CVGNSLISMFAQ 6
            CVGNSLISM+++
Sbjct: 421  CVGNSLISMYSR 432



 Score =  193 bits (491), Expect = 4e-47
 Identities = 110/313 (35%), Positives = 180/313 (57%), Gaps = 3/313 (0%)
 Frame = -3

Query: 935  CGDWETANLIFEEMGKDRDLVSWSAMISCFANNHRKFEAVTLFYDMLELGHYPNEFCFTA 756
            CGD E A  +F+ M  +R++V+W+ MIS F       +A+ LF  M+  G  P+ +  + 
Sbjct: 227  CGDVEGACKVFDNMS-ERNIVTWTLMISRFQQLGYYRDAIDLFNHMIFSGFMPDNYTLSG 285

Query: 755  VIRACRDCDNAWIGRVVFGSVLKSGYFESNLCVGCELIELFTKGM--GDLDSARKVFDRM 582
            V+ AC +     +G+ +    +KSG    ++CVGC L++++ K    G LD +RKVFDRM
Sbjct: 286  VVSACAELGLLSLGKELHSWAIKSGLVY-DVCVGCSLVDMYAKCAVDGSLDDSRKVFDRM 344

Query: 581  PERNAVTWTLMITRYAQCGLGK-DAVDLFLEMELSEFVPDSFTLSSVISACAELESFQLG 405
               N ++WT +IT Y Q G    +A +LFLEM      P+ FT SS++ ACA L    LG
Sbjct: 345  TNHNVMSWTAIITGYVQNGRSDMEATELFLEMIEGHVKPNHFTFSSILKACANLSDLHLG 404

Query: 404  QQLHSRVIRSGLALDVCVGCSIVDMYAKCATGGSFDESRKVFDRMPNHNVMSWTAIITGY 225
            +Q ++  ++ G A   CVG S++ MY++C    + + +RK FD +   N++S+  I+  Y
Sbjct: 405  EQFYAHAVKLGFASVNCVGNSLISMYSRC---DNMENARKAFDVLFEKNLVSYNTIVEAY 461

Query: 224  VQCGGHDYEAIYLFCEMIHGPVRPNHFTFSSVLKACANLSDSKRGEQVYAHVVKSGFASV 45
             + G +  EA  LF E+       N FTF+S+L   +++    +GEQ++A ++KS F + 
Sbjct: 462  AK-GLNSEEAFELFNEIEDTGFVVNAFTFASLLSGASSIGAIGKGEQIHARILKSDFKTN 520

Query: 44   NCVGNSLISMFAQ 6
              + N+LISM+++
Sbjct: 521  LHISNALISMYSR 533



 Score =  142 bits (357), Expect = 1e-31
 Identities = 75/247 (30%), Positives = 152/247 (61%), Gaps = 4/247 (1%)
 Frame = -3

Query: 941  SKC---GDWETANLIFEEMGKDRDLVSWSAMISCFANNHRK-FEAVTLFYDMLELGHYPN 774
            +KC   G  + +  +F+ M  + +++SW+A+I+ +  N R   EA  LF +M+E    PN
Sbjct: 326  AKCAVDGSLDDSRKVFDRM-TNHNVMSWTAIITGYVQNGRSDMEATELFLEMIEGHVKPN 384

Query: 773  EFCFTAVIRACRDCDNAWIGRVVFGSVLKSGYFESNLCVGCELIELFTKGMGDLDSARKV 594
             F F+++++AC +  +  +G   +   +K G+   N CVG  LI ++++   ++++ARK 
Sbjct: 385  HFTFSSILKACANLSDLHLGEQFYAHAVKLGFASVN-CVGNSLISMYSR-CDNMENARKA 442

Query: 593  FDRMPERNAVTWTLMITRYAQCGLGKDAVDLFLEMELSEFVPDSFTLSSVISACAELESF 414
            FD + E+N V++  ++  YA+    ++A +LF E+E + FV ++FT +S++S  + + + 
Sbjct: 443  FDVLFEKNLVSYNTIVEAYAKGLNSEEAFELFNEIEDTGFVVNAFTFASLLSGASSIGAI 502

Query: 413  QLGQQLHSRVIRSGLALDVCVGCSIVDMYAKCATGGSFDESRKVFDRMPNHNVMSWTAII 234
              G+Q+H+R+++S    ++ +  +++ MY++C   G  + + +VF+ M + NV+SWT++I
Sbjct: 503  GKGEQIHARILKSDFKTNLHISNALISMYSRC---GDIEAAFQVFNGMGDRNVISWTSMI 559

Query: 233  TGYVQCG 213
            TGY + G
Sbjct: 560  TGYAKHG 566



 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 49/157 (31%), Positives = 96/157 (61%), Gaps = 2/157 (1%)
 Frame = -3

Query: 470 PDSFTLSSVISACAELESFQLGQQLHSRVIRSGLALDVCVGCSIVDMYAKCATGGSFDES 291
           PD  T S ++ +C    +FQ G+ +H+ + +SGL LD  +  S++ +Y+KC   G  + +
Sbjct: 73  PDLITYSLLLKSCIRSNNFQKGKLVHNCLTQSGLELDSVILNSLISLYSKC---GELNSA 129

Query: 290 RKVFDRMPN-HNVMSWTAIITGYVQCGGHDYEAIYLFCEMIHGPVRPNHFTFSSVLKACA 114
             +F  M N  +++SW+A+I+ Y    G +++AI ++ +M+     PN + +S+V+K+C+
Sbjct: 130 NDIFISMGNKRDLVSWSALISCYA-TNGLEFDAIRVYIDMLVSGFFPNEYCYSAVIKSCS 188

Query: 113 NLSDSKRGEQVYAHVVKSGFASVN-CVGNSLISMFAQ 6
           N  +   GE ++  ++K G+ + + CVG +LI M+A+
Sbjct: 189 NRENFSYGEIIFGSLIKCGYLNSHVCVGCALIDMYAK 225



 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 45/151 (29%), Positives = 84/151 (55%)
 Frame = -3

Query: 941 SKCGDWETANLIFEEMGKDRDLVSWSAMISCFANNHRKFEAVTLFYDMLELGHYPNEFCF 762
           S+C + E A   F+ +  +++LVS++ ++  +A      EA  LF ++ + G   N F F
Sbjct: 431 SRCDNMENARKAFDVLF-EKNLVSYNTIVEAYAKGLNSEEAFELFNEIEDTGFVVNAFTF 489

Query: 761 TAVIRACRDCDNAWIGRVVFGSVLKSGYFESNLCVGCELIELFTKGMGDLDSARKVFDRM 582
            +++           G  +   +LKS  F++NL +   LI ++++  GD+++A +VF+ M
Sbjct: 490 ASLLSGASSIGAIGKGEQIHARILKSD-FKTNLHISNALISMYSR-CGDIEAAFQVFNGM 547

Query: 581 PERNAVTWTLMITRYAQCGLGKDAVDLFLEM 489
            +RN ++WT MIT YA+ G    A++ F +M
Sbjct: 548 GDRNVISWTSMITGYAKHGFAVRALETFHKM 578