BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024303
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632370.1| PREDICTED: cyclin-dependent kinase inhibitor...    80   1e-13
ref|XP_002464499.1| hypothetical protein SORBIDRAFT_01g019550 [S...    72   5e-11
ref|NP_001168443.1| uncharacterized protein LOC100382215 [Zea ma...    70   1e-10
ref|XP_002301783.1| kip-related cyclin-dependent kinase inhibito...    69   3e-10
ref|NP_199693.1| cyclin-dependent kinase inhibitor 3 [Arabidopsi...    69   4e-10

>ref|XP_003632370.1| PREDICTED: cyclin-dependent kinase inhibitor 3-like [Vitis
           vinifera] gi|297744341|emb|CBI37311.3| unnamed protein
           product [Vitis vinifera]
          Length = 218

 Score = 80.1 bits (196), Expect(2) = 1e-13
 Identities = 47/78 (60%), Positives = 55/78 (70%)
 Frame = +1

Query: 4   MGKYMRKAKITGEIAVMELATTTTTSLVSGVRTRAKTLALQRLQKTTXXXXXXXXXCYLQ 183
           MGKYM+KAKITG++ VME++++       GVRTRAKTLALQRLQKTT          YL+
Sbjct: 1   MGKYMKKAKITGDVTVMEVSSSL------GVRTRAKTLALQRLQKTTHQEGPKPDTSYLE 54

Query: 184 LRSRRLEKKPPSLLSGVN 237
           LRSRRLEK  P LLS  N
Sbjct: 55  LRSRRLEK--PPLLSEPN 70



 Score = 21.2 bits (43), Expect(2) = 1e-13
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 318 TDSNKKPNPNP 350
           ++ NKK NPNP
Sbjct: 67  SEPNKKQNPNP 77


>ref|XP_002464499.1| hypothetical protein SORBIDRAFT_01g019550 [Sorghum bicolor]
           gi|241918353|gb|EER91497.1| hypothetical protein
           SORBIDRAFT_01g019550 [Sorghum bicolor]
          Length = 191

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/72 (52%), Positives = 49/72 (68%)
 Frame = +1

Query: 4   MGKYMRKAKITGEIAVMELATTTTTSLVSGVRTRAKTLALQRLQKTTXXXXXXXXXCYLQ 183
           MGKYMRK K++GE+A+M++++        GVRTRA+ LALQRLQK            YL+
Sbjct: 1   MGKYMRKVKVSGEVAIMDVSSAPL-----GVRTRARALALQRLQKQQAQGEEGAGGEYLE 55

Query: 184 LRSRRLEKKPPS 219
           LRSRRLEK PP+
Sbjct: 56  LRSRRLEKLPPT 67


>ref|NP_001168443.1| uncharacterized protein LOC100382215 [Zea mays]
           gi|223948339|gb|ACN28253.1| unknown [Zea mays]
           gi|413934057|gb|AFW68608.1| hypothetical protein
           ZEAMMB73_775583 [Zea mays]
          Length = 192

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/75 (50%), Positives = 48/75 (64%)
 Frame = +1

Query: 4   MGKYMRKAKITGEIAVMELATTTTTSLVSGVRTRAKTLALQRLQKTTXXXXXXXXXCYLQ 183
           MGKYMRK K++ E+A+M++A         GVRTRA+ LALQRL+K            YL+
Sbjct: 1   MGKYMRKVKVSSEVAIMDVAAAPL-----GVRTRARALALQRLEKQQVQQEEGCGGEYLE 55

Query: 184 LRSRRLEKKPPSLLS 228
           LRSRRLEK PP + S
Sbjct: 56  LRSRRLEKLPPQVAS 70


>ref|XP_002301783.1| kip-related cyclin-dependent kinase inhibitor 3 [Populus
           trichocarpa] gi|222843509|gb|EEE81056.1| kip-related
           cyclin-dependent kinase inhibitor 3 [Populus
           trichocarpa]
          Length = 223

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/72 (56%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = +1

Query: 4   MGKYMRKAKITGEI-AVMELATTTTTSLVSGVRTRAKTLALQRLQKTTXXXXXXXXXCYL 180
           MGKYM+K+KIT ++ AVME+         SGVRTRAKT ALQ LQ            CYL
Sbjct: 1   MGKYMKKSKITSDVVAVMEVT--------SGVRTRAKTHALQLLQSPVSSNPDATSTCYL 52

Query: 181 QLRSRRLEKKPP 216
           QLRSRRLEK PP
Sbjct: 53  QLRSRRLEKPPP 64


>ref|NP_199693.1| cyclin-dependent kinase inhibitor 3 [Arabidopsis thaliana]
           gi|75262601|sp|Q9FKB5.1|KRP3_ARATH RecName:
           Full=Cyclin-dependent kinase inhibitor 3; AltName:
           Full=Inhibitor/interactor of CDK protein 6; AltName:
           Full=KIP-related protein 3 gi|9758881|dbj|BAB09435.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|14422289|emb|CAC41617.1| cyclin-dependent kinase
           inhibitor 3 [Arabidopsis thaliana]
           gi|94442511|gb|ABF19043.1| At5g48820 [Arabidopsis
           thaliana] gi|332008345|gb|AED95728.1| cyclin-dependent
           kinase inhibitor 3 [Arabidopsis thaliana]
          Length = 222

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
 Frame = +1

Query: 4   MGKYMRKAKITGEIAVMELATTTTTSLVSGVRTR-AKTLALQRLQKT-TXXXXXXXXXCY 177
           MGKYM+K+KITG+I+VME++  T  S   GVRTR AKTLAL+RL  +           CY
Sbjct: 1   MGKYMKKSKITGDISVMEVSKATAPS--PGVRTRAAKTLALKRLNSSAADSALPNDSSCY 58

Query: 178 LQLRSRRLEKKPPSLL 225
           LQLRSRRLE KP SL+
Sbjct: 59  LQLRSRRLE-KPSSLI 73