BLASTX nr result

ID: Coptis23_contig00024299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024299
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, ...   324   1e-86
ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li...   323   2e-86
ref|XP_004145601.1| PREDICTED: regulator of telomere elongation ...   318   5e-85
ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|2...   312   4e-83
ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein ho...   312   5e-83

>ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
           communis] gi|223551394|gb|EEF52880.1| brca1 interacting
           protein helicase 1 brip1, putative [Ricinus communis]
          Length = 1248

 Score =  324 bits (830), Expect = 1e-86
 Identities = 150/220 (68%), Positives = 190/220 (86%)
 Frame = -1

Query: 666 QNQKKKAAPTIFYASRTHSQLTQAIREYRKTSYRVPMAVLGSRKLYCTNKYVCGRENIDE 487
           + QKKKAAPTIFY+SRTH Q+TQ IREYRKT+YRVPMAVL SR+ YCTN +V G+ENIDE
Sbjct: 137 KTQKKKAAPTIFYSSRTHGQITQVIREYRKTAYRVPMAVLASRRHYCTNAHVNGKENIDE 196

Query: 486 ECKSLMKSKDGDQGCPEFRNVHKVKGHPSLQKGGCYEAHDIEDLVKLGRAVKGCSYFAAR 307
           ECK L+K  D D GC +F+N HKVKGHPSLQ+GGC+E HDIEDLVK+G+ V+GCSY+AAR
Sbjct: 197 ECKLLLK--DPDAGCLQFKNAHKVKGHPSLQRGGCHEVHDIEDLVKVGKVVRGCSYYAAR 254

Query: 306 SMAQEAQLVFCPYSYILSPSIRRAMEVDLKGSIVILDEAHNIEDIARDAASVDIEDDVLD 127
           SMA +AQLVFCPY+Y+++P IR AME+D++G+I+ILDEAHNIEDIARDA SVD+E+D+L 
Sbjct: 255 SMADDAQLVFCPYNYVINPVIRGAMEIDIRGAILILDEAHNIEDIARDAGSVDVEEDILY 314

Query: 126 TLKRELEQLCLVDSSVYQPLHDMLEGIISWIGRRVDTLVK 7
            L+ ELEQLC+ ++S+YQPL++M + ++SWI +R  TL K
Sbjct: 315 KLQTELEQLCVHNTSIYQPLYEMTQDLLSWIDQRKSTLQK 354


>ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
          Length = 1255

 Score =  323 bits (828), Expect = 2e-86
 Identities = 153/222 (68%), Positives = 189/222 (85%)
 Frame = -1

Query: 666 QNQKKKAAPTIFYASRTHSQLTQAIREYRKTSYRVPMAVLGSRKLYCTNKYVCGRENIDE 487
           +N+KKK  PTIFYASRTH+Q++Q IREYRKT+YRVPMAVL SRK YCTN+ +  + NIDE
Sbjct: 131 KNKKKKRKPTIFYASRTHTQISQVIREYRKTAYRVPMAVLASRKHYCTNRKINAKANIDE 190

Query: 486 ECKSLMKSKDGDQGCPEFRNVHKVKGHPSLQKGGCYEAHDIEDLVKLGRAVKGCSYFAAR 307
           ECK L++  D D GCPEF+N+HKVKGHPSLQKGGC+EAHDIEDLVK+G+ VKGC+Y+AAR
Sbjct: 191 ECKLLVR--DQDFGCPEFKNMHKVKGHPSLQKGGCHEAHDIEDLVKVGQVVKGCAYYAAR 248

Query: 306 SMAQEAQLVFCPYSYILSPSIRRAMEVDLKGSIVILDEAHNIEDIARDAASVDIEDDVLD 127
            MA  AQLVFCPYSYI++P IR AME+D++G+I+ILDEAHNIED+ARDA SVD+E+DVL 
Sbjct: 249 DMADNAQLVFCPYSYIINPVIRGAMELDIEGAILILDEAHNIEDMARDAGSVDVEEDVLH 308

Query: 126 TLKRELEQLCLVDSSVYQPLHDMLEGIISWIGRRVDTLVKRE 1
            L+ EL QLC  D+ +YQPL++M + IISWI R+ +TL KRE
Sbjct: 309 KLQTELGQLCPADAMIYQPLYEMTQDIISWIDRKKNTLEKRE 350


>ref|XP_004145601.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
           [Cucumis sativus]
          Length = 1027

 Score =  318 bits (816), Expect = 5e-85
 Identities = 155/226 (68%), Positives = 186/226 (82%)
 Frame = -1

Query: 678 GPPVQNQKKKAAPTIFYASRTHSQLTQAIREYRKTSYRVPMAVLGSRKLYCTNKYVCGRE 499
           GP  ++QKKK APTI+YASRTHSQ++Q IREYRKT+YRVPMAVL SRK  CTN YV G++
Sbjct: 133 GPNNKSQKKKTAPTIYYASRTHSQISQVIREYRKTAYRVPMAVLASRKHLCTNPYVRGKD 192

Query: 498 NIDEECKSLMKSKDGDQGCPEFRNVHKVKGHPSLQKGGCYEAHDIEDLVKLGRAVKGCSY 319
           N+DEECK L+K  D   GC EF+N +KVK HP+LQKGGC+E HDIEDLVK+G AVKGCSY
Sbjct: 193 NLDEECKLLLK--DQIAGCSEFKNANKVKCHPTLQKGGCHEVHDIEDLVKVGEAVKGCSY 250

Query: 318 FAARSMAQEAQLVFCPYSYILSPSIRRAMEVDLKGSIVILDEAHNIEDIARDAASVDIED 139
           +AARSMA +AQLVFCPYSYI++P IR AM+VD+KG+IVI DEAHNIEDIAR   SVDIE+
Sbjct: 251 YAARSMADDAQLVFCPYSYIINPVIRGAMDVDIKGAIVIFDEAHNIEDIARHGGSVDIEE 310

Query: 138 DVLDTLKRELEQLCLVDSSVYQPLHDMLEGIISWIGRRVDTLVKRE 1
           D L+ L+ ELE LC +DS VYQPL++M + + SWI +R  TL KRE
Sbjct: 311 DTLNKLQMELEDLCPIDSLVYQPLYEMTQDLTSWIDQRKTTLQKRE 356


>ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|222842363|gb|EEE79910.1|
           predicted protein [Populus trichocarpa]
          Length = 1183

 Score =  312 bits (800), Expect = 4e-83
 Identities = 147/221 (66%), Positives = 186/221 (84%)
 Frame = -1

Query: 663 NQKKKAAPTIFYASRTHSQLTQAIREYRKTSYRVPMAVLGSRKLYCTNKYVCGRENIDEE 484
           N+KKKA P I+YASRTHSQ++Q + E+RKT+YRVPMAVL SRK YCTN +V  +ENIDEE
Sbjct: 135 NKKKKAVPKIYYASRTHSQISQVVSEFRKTTYRVPMAVLASRKHYCTNVHVNRKENIDEE 194

Query: 483 CKSLMKSKDGDQGCPEFRNVHKVKGHPSLQKGGCYEAHDIEDLVKLGRAVKGCSYFAARS 304
           CK L+K K+   GC +F+N +KV+GHPSLQKGGC+E HDIEDLVK+G+ VKGCSY+AARS
Sbjct: 195 CKLLLKDKEA--GCLQFKNANKVRGHPSLQKGGCHEVHDIEDLVKVGQVVKGCSYYAARS 252

Query: 303 MAQEAQLVFCPYSYILSPSIRRAMEVDLKGSIVILDEAHNIEDIARDAASVDIEDDVLDT 124
           MA +AQLVFCPY+YI++P IR AMEVD+ G+I++LDEAHNIEDIARDA SVD+E+DVL  
Sbjct: 253 MADDAQLVFCPYNYIINPVIRGAMEVDIIGAILVLDEAHNIEDIARDAGSVDVEEDVLQK 312

Query: 123 LKRELEQLCLVDSSVYQPLHDMLEGIISWIGRRVDTLVKRE 1
           L+ EL++LC VD  +YQPL++M + ++SWI RR + L KRE
Sbjct: 313 LQTELQELCPVDPMIYQPLYEMAQDLLSWIERRKNKLEKRE 353


>ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein homolog [Cucumis sativus]
          Length = 1239

 Score =  312 bits (799), Expect = 5e-83
 Identities = 152/220 (69%), Positives = 181/220 (82%)
 Frame = -1

Query: 660 QKKKAAPTIFYASRTHSQLTQAIREYRKTSYRVPMAVLGSRKLYCTNKYVCGRENIDEEC 481
           Q KK APTI+YASRTHSQ++Q IREYRKT+YRVPMAVL SRK  CTN YV G++N+DEEC
Sbjct: 144 QLKKTAPTIYYASRTHSQISQVIREYRKTAYRVPMAVLASRKHLCTNPYVRGKDNLDEEC 203

Query: 480 KSLMKSKDGDQGCPEFRNVHKVKGHPSLQKGGCYEAHDIEDLVKLGRAVKGCSYFAARSM 301
           K L+K  D   GC EF+N +KVK HP+LQKGGC+E HDIEDLVK+G AVKGCSY+AARSM
Sbjct: 204 KLLLK--DQIAGCSEFKNANKVKCHPTLQKGGCHEVHDIEDLVKVGEAVKGCSYYAARSM 261

Query: 300 AQEAQLVFCPYSYILSPSIRRAMEVDLKGSIVILDEAHNIEDIARDAASVDIEDDVLDTL 121
           A +AQLVFCPYSYI++P IR AM+VD+KG+IVI DEAHNIEDIAR   SVDIE+D L+ L
Sbjct: 262 ADDAQLVFCPYSYIINPVIRGAMDVDIKGAIVIFDEAHNIEDIARHGGSVDIEEDTLNKL 321

Query: 120 KRELEQLCLVDSSVYQPLHDMLEGIISWIGRRVDTLVKRE 1
           + ELE LC +DS VYQPL++M + + SWI +R  TL KRE
Sbjct: 322 QMELEDLCPIDSLVYQPLYEMTQDLTSWIDQRKTTLQKRE 361


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