BLASTX nr result

ID: Coptis23_contig00024283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024283
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27124.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002315977.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_004135128.1| PREDICTED: uncharacterized protein LOC101207...    58   9e-07
ref|XP_002514530.1| conserved hypothetical protein [Ricinus comm...    55   5e-06
ref|XP_002312350.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>emb|CBI27124.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/67 (58%), Positives = 44/67 (65%)
 Frame = -2

Query: 203 KSENRSESTVLLKRSSSTSTSVDAKRGGFWKFGRLFRKKRGVIENNVDGVDEKSEMWDLE 24
           KSE +SE  VLLKRSSS+S  V+ KR  FW  GRLFRKKR        G D+KSE W  +
Sbjct: 104 KSEEKSEQVVLLKRSSSSS--VEIKRSRFWGIGRLFRKKRD------KGFDDKSEGWMFD 155

Query: 23  SMGVSRS 3
            MGVSRS
Sbjct: 156 YMGVSRS 162


>ref|XP_002315977.1| predicted protein [Populus trichocarpa] gi|222865017|gb|EEF02148.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
 Frame = -2

Query: 206 SKSENRSESTVLLKRSSSTSTSVDAKRGGFWKFGRLFRKKR--GVIENNVDGVDEKSEMW 33
           SK +   E   +LKRSSS+   +  K  GFW+ GRLF KKR  G   ++V G +EKS++W
Sbjct: 114 SKDQKGDELNFMLKRSSSSCVEIKRK-SGFWRIGRLFSKKRGKGCDRSSVGGFEEKSDVW 172

Query: 32  DLESMGVSR 6
            ++ MGVSR
Sbjct: 173 VVDYMGVSR 181


>ref|XP_004135128.1| PREDICTED: uncharacterized protein LOC101207638 [Cucumis sativus]
           gi|449493476|ref|XP_004159307.1| PREDICTED:
           uncharacterized protein LOC101225146 [Cucumis sativus]
          Length = 389

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
 Frame = -2

Query: 191 RSESTVLLKRSSSTSTSVDAKRGGFWKFGRLFRKKR--GVIENNVDGVDEKSEMWDLESM 18
           + E  VLL+RSSS+   V+ K+ GFW+ G+ FRKKR  G   ++V G DEKS++  ++ M
Sbjct: 107 KREEVVLLERSSSSC--VEIKKSGFWRIGKFFRKKREKGCERSSVCGFDEKSDICMVDYM 164

Query: 17  GVSRS 3
           GVSRS
Sbjct: 165 GVSRS 169


>ref|XP_002514530.1| conserved hypothetical protein [Ricinus communis]
           gi|223546134|gb|EEF47636.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 408

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 12/77 (15%)
 Frame = -2

Query: 197 ENRSESTVLLKRSSSTSTSVDAKRGGFWKFGRLFRKKR--GVIENN----------VDGV 54
           E  ++   LLKRSSS+   +  K  GFW+ G+LF KKR  G  +NN          V G 
Sbjct: 120 EKTTDDVFLLKRSSSSCVEIKRK-SGFWRIGKLFSKKREKGNNDNNNNNNNCERSSVGGF 178

Query: 53  DEKSEMWDLESMGVSRS 3
           +EKS++W ++ MGVSRS
Sbjct: 179 EEKSDLWVVDYMGVSRS 195


>ref|XP_002312350.1| predicted protein [Populus trichocarpa] gi|222852170|gb|EEE89717.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
 Frame = -2

Query: 206 SKSENRSESTVLLKRSSSTSTSVDAKRGGFWKFGRLFRKKR--GVIENNVDGVDEKSEMW 33
           S  +   E   L+KR+SS+   +  K G FW  GRLF KKR  G   ++V G++EKS++W
Sbjct: 114 SGDQKGDELNFLVKRNSSSCVEIKRKNG-FWGIGRLFSKKRGKGCDRSSVGGLEEKSDLW 172

Query: 32  DLESMGVSR 6
            ++ MGVSR
Sbjct: 173 VVDYMGVSR 181


Top