BLASTX nr result

ID: Coptis23_contig00024275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024275
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635163.1| PREDICTED: ankyrin repeat domain-containing ...    57   2e-06
ref|XP_002270437.2| PREDICTED: ankyrin repeat domain-containing ...    57   2e-06
emb|CBI24454.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_003635163.1| PREDICTED: ankyrin repeat domain-containing protein, chloroplastic
           isoform 2 [Vitis vinifera]
          Length = 406

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = +2

Query: 50  IFEDPYLQKDYNFEKPSNK-KKQTVSLPPEEDLVPEKWKEAVVEYNITKKERKK 208
           +FEDPYLQ +++F   + K  K  + + PE +LVPEKWKE   + NITKKER+K
Sbjct: 83  VFEDPYLQDNFDFNAQNPKHNKPNLEIEPE-NLVPEKWKEVQEQINITKKERRK 135


>ref|XP_002270437.2| PREDICTED: ankyrin repeat domain-containing protein, chloroplastic
           isoform 1 [Vitis vinifera]
          Length = 439

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = +2

Query: 50  IFEDPYLQKDYNFEKPSNK-KKQTVSLPPEEDLVPEKWKEAVVEYNITKKERKK 208
           +FEDPYLQ +++F   + K  K  + + PE +LVPEKWKE   + NITKKER+K
Sbjct: 83  VFEDPYLQDNFDFNAQNPKHNKPNLEIEPE-NLVPEKWKEVQEQINITKKERRK 135


>emb|CBI24454.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = +2

Query: 50  IFEDPYLQKDYNFEKPSNK-KKQTVSLPPEEDLVPEKWKEAVVEYNITKKERKK 208
           +FEDPYLQ +++F   + K  K  + + PE +LVPEKWKE   + NITKKER+K
Sbjct: 175 VFEDPYLQDNFDFNAQNPKHNKPNLEIEPE-NLVPEKWKEVQEQINITKKERRK 227


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