BLASTX nr result

ID: Coptis23_contig00024261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024261
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514900.1| nuclear transport factor, putative [Ricinus ...   141   6e-32
ref|XP_004156943.1| PREDICTED: nuclear transport factor 2-like [...   140   1e-31
ref|XP_004152114.1| PREDICTED: nuclear transport factor 2-like [...   140   1e-31
ref|XP_002276841.1| PREDICTED: nuclear transport factor 2 isofor...   140   1e-31
ref|XP_002893460.1| hypothetical protein ARALYDRAFT_890252 [Arab...   137   7e-31

>ref|XP_002514900.1| nuclear transport factor, putative [Ricinus communis]
           gi|223545951|gb|EEF47454.1| nuclear transport factor,
           putative [Ricinus communis]
          Length = 123

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/75 (86%), Positives = 70/75 (93%)
 Frame = +2

Query: 32  MDPDGVAKQFVDHYYTTFDANRTGLGNLYQESSMLTFEGQKIQGSTNIVAKLTSLPFQQC 211
           MDPD VAK FV+HYYTTFDANR GL NLYQE+SMLTFEGQKIQG+ N+VAKLTSLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYTTFDANRAGLANLYQEASMLTFEGQKIQGAQNVVAKLTSLPFQQC 60

Query: 212 KHSITTVDCQPSGPA 256
           +HSITTVDCQPSGPA
Sbjct: 61  QHSITTVDCQPSGPA 75


>ref|XP_004156943.1| PREDICTED: nuclear transport factor 2-like [Cucumis sativus]
          Length = 173

 Score =  140 bits (352), Expect = 1e-31
 Identities = 65/80 (81%), Positives = 71/80 (88%)
 Frame = +2

Query: 14  NCYLVSMDPDGVAKQFVDHYYTTFDANRTGLGNLYQESSMLTFEGQKIQGSTNIVAKLTS 193
           N  L  MDPD VAK FVDHYY+TFDANR  LGNLYQ++SMLTFEGQKIQGS NIVAKL+S
Sbjct: 45  NFNLTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSS 104

Query: 194 LPFQQCKHSITTVDCQPSGP 253
           LPFQQCKHS++TVDCQPSGP
Sbjct: 105 LPFQQCKHSVSTVDCQPSGP 124


>ref|XP_004152114.1| PREDICTED: nuclear transport factor 2-like [Cucumis sativus]
          Length = 173

 Score =  140 bits (352), Expect = 1e-31
 Identities = 65/80 (81%), Positives = 71/80 (88%)
 Frame = +2

Query: 14  NCYLVSMDPDGVAKQFVDHYYTTFDANRTGLGNLYQESSMLTFEGQKIQGSTNIVAKLTS 193
           N  L  MDPD VAK FVDHYY+TFDANR  LGNLYQ++SMLTFEGQKIQGS NIVAKL+S
Sbjct: 45  NFNLTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSS 104

Query: 194 LPFQQCKHSITTVDCQPSGP 253
           LPFQQCKHS++TVDCQPSGP
Sbjct: 105 LPFQQCKHSVSTVDCQPSGP 124


>ref|XP_002276841.1| PREDICTED: nuclear transport factor 2 isoform 1 [Vitis vinifera]
           gi|147821626|emb|CAN70316.1| hypothetical protein
           VITISV_001831 [Vitis vinifera]
          Length = 123

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/75 (88%), Positives = 69/75 (92%)
 Frame = +2

Query: 32  MDPDGVAKQFVDHYYTTFDANRTGLGNLYQESSMLTFEGQKIQGSTNIVAKLTSLPFQQC 211
           MDPD VAK FV+HYY+TFDANR  L NLYQESSMLTFEGQKIQGS NIVAKLTSLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRANLANLYQESSMLTFEGQKIQGSPNIVAKLTSLPFQQC 60

Query: 212 KHSITTVDCQPSGPA 256
           +HSITTVDCQPSGPA
Sbjct: 61  QHSITTVDCQPSGPA 75


>ref|XP_002893460.1| hypothetical protein ARALYDRAFT_890252 [Arabidopsis lyrata subsp.
           lyrata] gi|297339302|gb|EFH69719.1| hypothetical protein
           ARALYDRAFT_890252 [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/75 (86%), Positives = 69/75 (92%)
 Frame = +2

Query: 32  MDPDGVAKQFVDHYYTTFDANRTGLGNLYQESSMLTFEGQKIQGSTNIVAKLTSLPFQQC 211
           MDPD VAK FV+HYY+TFDANR GL +LYQE SMLTFEGQKIQGS NIVAKLTSLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRPGLVSLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60

Query: 212 KHSITTVDCQPSGPA 256
           KH+ITTVDCQPSGPA
Sbjct: 61  KHNITTVDCQPSGPA 75


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