BLASTX nr result

ID: Coptis23_contig00024259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024259
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281225.1| PREDICTED: probable flavin-containing monoox...    52   3e-08
ref|XP_003631536.1| PREDICTED: LOW QUALITY PROTEIN: probable fla...    52   2e-07
emb|CBI37798.3| unnamed protein product [Vitis vinifera]               49   8e-07
ref|XP_002278690.1| PREDICTED: probable flavin-containing monoox...    49   8e-07
ref|XP_002278596.1| PREDICTED: probable flavin-containing monoox...    51   1e-06

>ref|XP_002281225.1| PREDICTED: probable flavin-containing monooxygenase 1 isoform 1
           [Vitis vinifera] gi|297744541|emb|CBI37803.3| unnamed
           protein product [Vitis vinifera]
          Length = 517

 Score = 51.6 bits (122), Expect(2) = 3e-08
 Identities = 22/48 (45%), Positives = 32/48 (66%)
 Frame = -2

Query: 257 RAMHFDYEGASDKEKVIWDL*TGTGDPFSPKGKWNITADNSYMQSPEV 114
           + +  +YEGASD+E   W+L  G G+ FS KGKWN+T  ++ + S EV
Sbjct: 100 KVVSIEYEGASDEEMQAWELWGGNGEAFSSKGKWNLTVTDTQILSTEV 147



 Score = 30.8 bits (68), Expect(2) = 3e-08
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -1

Query: 318 DHNQIMAGHFDLKRYIKFNSK 256
           D+ Q  A HFDL R+IKFNSK
Sbjct: 80  DYLQSYARHFDLLRHIKFNSK 100


>ref|XP_003631536.1| PREDICTED: LOW QUALITY PROTEIN: probable flavin-containing
           monooxygenase 1-like [Vitis vinifera]
          Length = 392

 Score = 52.0 bits (123), Expect(2) = 2e-07
 Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
 Frame = -2

Query: 257 RAMHFDYEGASDKEKVIWDL*TGTGDPFSPKGKWNITADNSYMQSPEVTLLSTGYNDL-D 81
           R +  ++EG +++E   W+L  G  +PFS KGKW IT +N+   S EV L  T +  L D
Sbjct: 99  RVVSIEFEGXAEEELQAWELWGGNAEPFSSKGKWRITVENTQRLSTEVMLYKTKHWSLPD 158

Query: 80  VQNLQI*KVDFYF 42
            Q   I  V  YF
Sbjct: 159 YQPWGIPLVYLYF 171



 Score = 28.1 bits (61), Expect(2) = 2e-07
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 6/28 (21%)
 Frame = -1

Query: 321 PDHNQIM------AGHFDLKRYIKFNSK 256
           PDH Q++      A HF+L R+I+FNS+
Sbjct: 72  PDHAQVVDYIQSYAHHFNLTRHIEFNSR 99


>emb|CBI37798.3| unnamed protein product [Vitis vinifera]
          Length = 690

 Score = 48.9 bits (115), Expect(2) = 8e-07
 Identities = 20/48 (41%), Positives = 30/48 (62%)
 Frame = -2

Query: 257 RAMHFDYEGASDKEKVIWDL*TGTGDPFSPKGKWNITADNSYMQSPEV 114
           + +   YEG  ++E   W+L  G GDPF  KGKWN+T ++++  S EV
Sbjct: 100 KVLSIAYEGPPEEEMQAWELWGGAGDPFGSKGKWNLTVNDTHNLSTEV 147



 Score = 28.9 bits (63), Expect(2) = 8e-07
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 6/28 (21%)
 Frame = -1

Query: 321 PDHNQIM------AGHFDLKRYIKFNSK 256
           P H+Q++      A HF L R+IKFNSK
Sbjct: 73  PSHSQVLDYLQSYAHHFGLLRHIKFNSK 100


>ref|XP_002278690.1| PREDICTED: probable flavin-containing monooxygenase 1-like [Vitis
           vinifera]
          Length = 517

 Score = 48.9 bits (115), Expect(2) = 8e-07
 Identities = 20/48 (41%), Positives = 30/48 (62%)
 Frame = -2

Query: 257 RAMHFDYEGASDKEKVIWDL*TGTGDPFSPKGKWNITADNSYMQSPEV 114
           + +   YEG  ++E   W+L  G GDPF  KGKWN+T ++++  S EV
Sbjct: 100 KVLSIAYEGPPEEEMQAWELWGGAGDPFGSKGKWNLTVNDTHNLSTEV 147



 Score = 28.9 bits (63), Expect(2) = 8e-07
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 6/28 (21%)
 Frame = -1

Query: 321 PDHNQIM------AGHFDLKRYIKFNSK 256
           P H+Q++      A HF L R+IKFNSK
Sbjct: 73  PSHSQVLDYLQSYAHHFGLLRHIKFNSK 100


>ref|XP_002278596.1| PREDICTED: probable flavin-containing monooxygenase 1 [Vitis
           vinifera] gi|297744540|emb|CBI37802.3| unnamed protein
           product [Vitis vinifera]
          Length = 517

 Score = 51.2 bits (121), Expect(2) = 1e-06
 Identities = 22/43 (51%), Positives = 31/43 (72%)
 Frame = -2

Query: 242 DYEGASDKEKVIWDL*TGTGDPFSPKGKWNITADNSYMQSPEV 114
           +YEG SD+E   W+L +GTG+PF+ KGKW+IT  ++   S EV
Sbjct: 104 EYEGPSDEEVQAWELWSGTGEPFNSKGKWSITVKDTNSLSTEV 146



 Score = 25.8 bits (55), Expect(2) = 1e-06
 Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 6/28 (21%)
 Frame = -1

Query: 321 PDHNQIM------AGHFDLKRYIKFNSK 256
           P+H+Q++      A HF+L  +IKFNS+
Sbjct: 72  PNHSQVLDYIVSYATHFNLLPHIKFNSE 99


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