BLASTX nr result

ID: Coptis23_contig00024255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024255
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23729.3| unnamed protein product [Vitis vinifera]              550   e-154
ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266...   550   e-154
ref|XP_002528340.1| ATP binding protein, putative [Ricinus commu...   526   e-147
ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|2...   525   e-147
dbj|BAB02932.1| unnamed protein product [Arabidopsis thaliana]        486   e-135

>emb|CBI23729.3| unnamed protein product [Vitis vinifera]
          Length = 1114

 Score =  550 bits (1418), Expect = e-154
 Identities = 269/363 (74%), Positives = 304/363 (83%)
 Frame = -2

Query: 1089 LNPPTFEIAVEIQETCKLMSNVMCSIPEFTCVSAAXXXXXXXXXXVNHIEFCRIKNVVDE 910
            LNPP +EIA  IQ TC+LM+NV CSIPEFTCVS A           NHIEFCRIK+V+DE
Sbjct: 409  LNPPAYEIASIIQATCRLMNNVTCSIPEFTCVSPAKLVKLLELREANHIEFCRIKSVLDE 468

Query: 909  ILQMHRNSELHRILQLLFKPTWFATGLNIEFESLVNECEWVSDKIGEMISLDGENDQKMS 730
            ILQMHRNS+L++IL+LL  PTW ATGL I+F++LVNECEW+S +IG+MI LDGENDQK+S
Sbjct: 469  ILQMHRNSDLNKILKLLMDPTWVATGLKIDFDTLVNECEWISARIGKMIFLDGENDQKIS 528

Query: 729  SSHVIPSDFFEAIESPWRGRVKRIHAEEAFTGVEAAAEDLSTAVKEDFLPIVTRVKATTA 550
               +IP+DFFE +ESPW+GRVKRIH EEAF  VE AAE LS A+ EDFLPI++R+KATTA
Sbjct: 529  YHPIIPNDFFEDMESPWKGRVKRIHVEEAFAEVERAAEALSLAISEDFLPIISRIKATTA 588

Query: 549  PLGGPKGEVLFAREHEAVWFKGKRFVPAVWAGTPGEEQIRQLRPATDSKGRKVGDEWFTT 370
            PLGGPKGEV++AREHEAVWFKGKRF P  WAGTPGEEQI+QLRPA DSKGRKVG EWFTT
Sbjct: 589  PLGGPKGEVVYAREHEAVWFKGKRFAPVAWAGTPGEEQIKQLRPAIDSKGRKVGLEWFTT 648

Query: 369  TKVEDALMRYHVACAKAKARVLELLRGLSAELQTKINILVYASMLLVIAKALFCHVSEGR 190
             KVEDAL RYH A  KAKARVLELLRGLSAELQTKINIL++ASMLLVIAKALF HVSEGR
Sbjct: 649  VKVEDALTRYHEAGDKAKARVLELLRGLSAELQTKINILIFASMLLVIAKALFAHVSEGR 708

Query: 189  RRKWAFPALVEILNPQDNNSEDKSKIMKITGLSPYWFDVAQGDAIHNTVEMHSLFLLTGP 10
            RRKW FP+LVE+   +D    D +  MKITGLSPYW DVAQG A+HNTV+M SLFLLTGP
Sbjct: 709  RRKWVFPSLVELHRSKDMEPLDGANWMKITGLSPYWLDVAQGSAVHNTVDMKSLFLLTGP 768

Query: 9    NGG 1
            NGG
Sbjct: 769  NGG 771


>ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266612 [Vitis vinifera]
          Length = 1144

 Score =  550 bits (1418), Expect = e-154
 Identities = 269/363 (74%), Positives = 304/363 (83%)
 Frame = -2

Query: 1089 LNPPTFEIAVEIQETCKLMSNVMCSIPEFTCVSAAXXXXXXXXXXVNHIEFCRIKNVVDE 910
            LNPP +EIA  IQ TC+LM+NV CSIPEFTCVS A           NHIEFCRIK+V+DE
Sbjct: 409  LNPPAYEIASIIQATCRLMNNVTCSIPEFTCVSPAKLVKLLELREANHIEFCRIKSVLDE 468

Query: 909  ILQMHRNSELHRILQLLFKPTWFATGLNIEFESLVNECEWVSDKIGEMISLDGENDQKMS 730
            ILQMHRNS+L++IL+LL  PTW ATGL I+F++LVNECEW+S +IG+MI LDGENDQK+S
Sbjct: 469  ILQMHRNSDLNKILKLLMDPTWVATGLKIDFDTLVNECEWISARIGKMIFLDGENDQKIS 528

Query: 729  SSHVIPSDFFEAIESPWRGRVKRIHAEEAFTGVEAAAEDLSTAVKEDFLPIVTRVKATTA 550
               +IP+DFFE +ESPW+GRVKRIH EEAF  VE AAE LS A+ EDFLPI++R+KATTA
Sbjct: 529  YHPIIPNDFFEDMESPWKGRVKRIHVEEAFAEVERAAEALSLAISEDFLPIISRIKATTA 588

Query: 549  PLGGPKGEVLFAREHEAVWFKGKRFVPAVWAGTPGEEQIRQLRPATDSKGRKVGDEWFTT 370
            PLGGPKGEV++AREHEAVWFKGKRF P  WAGTPGEEQI+QLRPA DSKGRKVG EWFTT
Sbjct: 589  PLGGPKGEVVYAREHEAVWFKGKRFAPVAWAGTPGEEQIKQLRPAIDSKGRKVGLEWFTT 648

Query: 369  TKVEDALMRYHVACAKAKARVLELLRGLSAELQTKINILVYASMLLVIAKALFCHVSEGR 190
             KVEDAL RYH A  KAKARVLELLRGLSAELQTKINIL++ASMLLVIAKALF HVSEGR
Sbjct: 649  VKVEDALTRYHEAGDKAKARVLELLRGLSAELQTKINILIFASMLLVIAKALFAHVSEGR 708

Query: 189  RRKWAFPALVEILNPQDNNSEDKSKIMKITGLSPYWFDVAQGDAIHNTVEMHSLFLLTGP 10
            RRKW FP+LVE+   +D    D +  MKITGLSPYW DVAQG A+HNTV+M SLFLLTGP
Sbjct: 709  RRKWVFPSLVELHRSKDMEPLDGANWMKITGLSPYWLDVAQGSAVHNTVDMKSLFLLTGP 768

Query: 9    NGG 1
            NGG
Sbjct: 769  NGG 771


>ref|XP_002528340.1| ATP binding protein, putative [Ricinus communis]
            gi|223532208|gb|EEF34012.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 937

 Score =  526 bits (1356), Expect = e-147
 Identities = 256/363 (70%), Positives = 297/363 (81%)
 Frame = -2

Query: 1089 LNPPTFEIAVEIQETCKLMSNVMCSIPEFTCVSAAXXXXXXXXXXVNHIEFCRIKNVVDE 910
            LNPP +EIA  IQ TCKLMS++ CSIPEFTC+S+A           NH+EFCRIKNV+DE
Sbjct: 412  LNPPAYEIASTIQATCKLMSSITCSIPEFTCISSAKLVKLLELREANHLEFCRIKNVLDE 471

Query: 909  ILQMHRNSELHRILQLLFKPTWFATGLNIEFESLVNECEWVSDKIGEMISLDGENDQKMS 730
            IL MHRNSEL+ IL+ L  PTW ATGL I+FE+LVNECEW S +I EMISLDGE+DQK+S
Sbjct: 472  ILHMHRNSELNEILKSLMDPTWVATGLKIDFETLVNECEWASGRICEMISLDGEHDQKLS 531

Query: 729  SSHVIPSDFFEAIESPWRGRVKRIHAEEAFTGVEAAAEDLSTAVKEDFLPIVTRVKATTA 550
            S  VIPSDFFE +ES W+GRVKR+H E     V+ AA  LS+AV EDFLPI++R+KATTA
Sbjct: 532  SYSVIPSDFFEDMESLWKGRVKRVHIEGECAEVDRAAHALSSAVTEDFLPIISRIKATTA 591

Query: 549  PLGGPKGEVLFAREHEAVWFKGKRFVPAVWAGTPGEEQIRQLRPATDSKGRKVGDEWFTT 370
            PLGGPKGE+L+AR+H+AVWFKGKRF P+VWAGTPGEEQI+QL+PA DSKGRKVG+EWFTT
Sbjct: 592  PLGGPKGEILYARDHDAVWFKGKRFAPSVWAGTPGEEQIKQLKPAMDSKGRKVGEEWFTT 651

Query: 369  TKVEDALMRYHVACAKAKARVLELLRGLSAELQTKINILVYASMLLVIAKALFCHVSEGR 190
             KVEDAL RYH A  KAKARVLELL+GLSAELQTKI ILV+ASMLLVIAKALF HVSEGR
Sbjct: 652  IKVEDALRRYHDASEKAKARVLELLKGLSAELQTKIKILVFASMLLVIAKALFAHVSEGR 711

Query: 189  RRKWAFPALVEILNPQDNNSEDKSKIMKITGLSPYWFDVAQGDAIHNTVEMHSLFLLTGP 10
            RRKW FP L+ +   +D  S D++  MK+  LSPYW D A+G+A+HNTVEM SL LLTGP
Sbjct: 712  RRKWVFPTLIALDTSKDIKSLDRANGMKLIALSPYWLDAAEGNAVHNTVEMQSLVLLTGP 771

Query: 9    NGG 1
            NGG
Sbjct: 772  NGG 774


>ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|222863550|gb|EEF00681.1|
            predicted protein [Populus trichocarpa]
          Length = 1130

 Score =  525 bits (1353), Expect = e-147
 Identities = 254/363 (69%), Positives = 295/363 (81%)
 Frame = -2

Query: 1089 LNPPTFEIAVEIQETCKLMSNVMCSIPEFTCVSAAXXXXXXXXXXVNHIEFCRIKNVVDE 910
            LNPP +EIA  IQ TCKLMSN+ CSIPEFTCVS+A           NHIEFCRIKNV+DE
Sbjct: 409  LNPPAYEIASTIQATCKLMSNITCSIPEFTCVSSAKLVKLLEQKEANHIEFCRIKNVLDE 468

Query: 909  ILQMHRNSELHRILQLLFKPTWFATGLNIEFESLVNECEWVSDKIGEMISLDGENDQKMS 730
            IL M+RNSEL+ IL+ L  P W ATGL I+FE+LVNECEW S +I EMISLDGE+DQK+S
Sbjct: 469  ILFMYRNSELNEILKSLMDPAWMATGLKIDFETLVNECEWASGRISEMISLDGESDQKIS 528

Query: 729  SSHVIPSDFFEAIESPWRGRVKRIHAEEAFTGVEAAAEDLSTAVKEDFLPIVTRVKATTA 550
            S  V+PS+FFE +ES W+GRVKR+H EE F+ VE AA+ LS AV EDF+PI++R+KATT+
Sbjct: 529  SCPVVPSEFFEDMESSWKGRVKRVHIEEEFSEVEKAAQALSLAVTEDFIPIISRIKATTS 588

Query: 549  PLGGPKGEVLFAREHEAVWFKGKRFVPAVWAGTPGEEQIRQLRPATDSKGRKVGDEWFTT 370
            P GGPKGE+L+AREHEAVWFKGKRF PAVWAGTPGEEQI+QL+PA DSKGRKVG+EWFTT
Sbjct: 589  PFGGPKGEILYAREHEAVWFKGKRFAPAVWAGTPGEEQIKQLKPAVDSKGRKVGEEWFTT 648

Query: 369  TKVEDALMRYHVACAKAKARVLELLRGLSAELQTKINILVYASMLLVIAKALFCHVSEGR 190
             K+EDAL RYH A  KAKA+VLEL RGLSAELQTK+NILV+ASM+LVIAKALF HVSEGR
Sbjct: 649  IKLEDALTRYHDAGEKAKAKVLELFRGLSAELQTKVNILVFASMVLVIAKALFAHVSEGR 708

Query: 189  RRKWAFPALVEILNPQDNNSEDKSKIMKITGLSPYWFDVAQGDAIHNTVEMHSLFLLTGP 10
            RRKW FP L    + +   S D +  MK  GLSPYWF+ A+G A+ NTV+M SLFLLTGP
Sbjct: 709  RRKWVFPTLTGFNDSKGVKSSDGANRMKFVGLSPYWFNAAEGSAVQNTVDMQSLFLLTGP 768

Query: 9    NGG 1
            NGG
Sbjct: 769  NGG 771


>dbj|BAB02932.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1016

 Score =  486 bits (1251), Expect = e-135
 Identities = 238/364 (65%), Positives = 284/364 (78%), Gaps = 1/364 (0%)
 Frame = -2

Query: 1089 LNPPTFEIAVEIQETCKLMSNVMCSIPEFTCVSAAXXXXXXXXXXVNHIEFCRIKNVVDE 910
            LNPP ++IA++IQETCKLMS V CSIPEFTCVS+A           N+IEFCRIKNV+D+
Sbjct: 307  LNPPAYDIALKIQETCKLMSTVTCSIPEFTCVSSAKLVKLLEQREANYIEFCRIKNVLDD 366

Query: 909  ILQMHRNSELHRILQLLFKPTWFATGLNIEFESLVNECEWVSDKIGEMISLD-GENDQKM 733
            +L MHR++EL  IL+LL  PTW ATGL I+F++ VNEC W SD IGEMISLD  E+ Q +
Sbjct: 367  VLHMHRHAELVEILKLLMDPTWVATGLKIDFDTFVNECHWASDTIGEMISLDENESHQNV 426

Query: 732  SSSHVIPSDFFEAIESPWRGRVKRIHAEEAFTGVEAAAEDLSTAVKEDFLPIVTRVKATT 553
            S    +P++FF  +ES WRGRVK IH EE  T VE +AE LS AV EDF PI++R+KATT
Sbjct: 427  SKCDNVPNEFFYDMESSWRGRVKGIHIEEEITQVEKSAEALSLAVAEDFHPIISRIKATT 486

Query: 552  APLGGPKGEVLFAREHEAVWFKGKRFVPAVWAGTPGEEQIRQLRPATDSKGRKVGDEWFT 373
            A LGGPKGE+ +AREHE+VWFKGKRF P++WAGT GE+QI+QL+PA DSKG+KVG+EWFT
Sbjct: 487  ASLGGPKGEIAYAREHESVWFKGKRFTPSIWAGTAGEDQIKQLKPALDSKGKKVGEEWFT 546

Query: 372  TTKVEDALMRYHVACAKAKARVLELLRGLSAELQTKINILVYASMLLVIAKALFCHVSEG 193
            T KVE AL+RYH A   AKARVLELLR LS +LQTKIN+LV+ASMLLVI+KALF H  EG
Sbjct: 547  TPKVEIALVRYHEASENAKARVLELLRELSVKLQTKINVLVFASMLLVISKALFSHACEG 606

Query: 192  RRRKWAFPALVEILNPQDNNSEDKSKIMKITGLSPYWFDVAQGDAIHNTVEMHSLFLLTG 13
            RRRKW FP LV     +     D +  MK+TGLSPYWFDV+ G A+HNTV+M SLFLLTG
Sbjct: 607  RRRKWVFPTLVGFSLDEGAKPLDGASRMKLTGLSPYWFDVSSGTAVHNTVDMQSLFLLTG 666

Query: 12   PNGG 1
            PNGG
Sbjct: 667  PNGG 670


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