BLASTX nr result

ID: Coptis23_contig00024252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024252
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284549.1| PREDICTED: protein AUXIN RESPONSE 4 [Vitis v...   144   8e-33
ref|XP_004171021.1| PREDICTED: protein AUXIN RESPONSE 4-like [Cu...   143   1e-32
ref|XP_004135783.1| PREDICTED: protein AUXIN RESPONSE 4-like [Cu...   143   1e-32
ref|XP_003521705.1| PREDICTED: protein AUXIN RESPONSE 4-like [Gl...   132   2e-29
ref|XP_003554658.1| PREDICTED: protein AUXIN RESPONSE 4-like [Gl...   130   1e-28

>ref|XP_002284549.1| PREDICTED: protein AUXIN RESPONSE 4 [Vitis vinifera]
          Length = 474

 Score =  144 bits (363), Expect = 8e-33
 Identities = 69/127 (54%), Positives = 84/127 (66%)
 Frame = -3

Query: 381 SPTANAFIFWAYXXXXXXXXXXXXXXXXXXSPQDDKSWFLSLPNDLRHHYSKGRTIKVQT 202
           S + N F FW Y                  SPQD KSWFLSLP +LRHHYSKGR IKVQT
Sbjct: 34  STSPNPFSFWFYFTLSVSLATFLFSSLPSLSPQDPKSWFLSLPTNLRHHYSKGRIIKVQT 93

Query: 201 SPTRPPIQVFAIENGPRNGETVLLVHGLGCSSYSFRHVVKYLGSSGIHVVAIDLPGSGFS 22
               PP +VF ++ G +  E V++VHGLG SSY+FR+V+++LGS G+H V +DLPGSGFS
Sbjct: 94  DAHHPPFEVFTVQEGAKASENVVIVHGLGSSSYAFRNVIQFLGSRGVHAVGVDLPGSGFS 153

Query: 21  DKSSLEE 1
           DKS L E
Sbjct: 154 DKSVLVE 160


>ref|XP_004171021.1| PREDICTED: protein AUXIN RESPONSE 4-like [Cucumis sativus]
          Length = 472

 Score =  143 bits (361), Expect = 1e-32
 Identities = 71/126 (56%), Positives = 82/126 (65%)
 Frame = -3

Query: 381 SPTANAFIFWAYXXXXXXXXXXXXXXXXXXSPQDDKSWFLSLPNDLRHHYSKGRTIKVQT 202
           SPT N F FW Y                  SP D KSWFLSLPN LRHHYSKGR +KVQ 
Sbjct: 44  SPTPNPFTFWFYFTLIVSIITYFFISLPSLSPPDPKSWFLSLPNSLRHHYSKGRLLKVQI 103

Query: 201 SPTRPPIQVFAIENGPRNGETVLLVHGLGCSSYSFRHVVKYLGSSGIHVVAIDLPGSGFS 22
           S    PI+VFA+ENG +  E V++VHGLG SSYSFR V+  LGS G+  +A DLPG+GFS
Sbjct: 104 SGNLSPIEVFAVENGAKGNENVVIVHGLGLSSYSFRKVLDSLGSKGVRALAFDLPGNGFS 163

Query: 21  DKSSLE 4
           DKS+ E
Sbjct: 164 DKSTAE 169


>ref|XP_004135783.1| PREDICTED: protein AUXIN RESPONSE 4-like [Cucumis sativus]
          Length = 499

 Score =  143 bits (361), Expect = 1e-32
 Identities = 71/126 (56%), Positives = 82/126 (65%)
 Frame = -3

Query: 381 SPTANAFIFWAYXXXXXXXXXXXXXXXXXXSPQDDKSWFLSLPNDLRHHYSKGRTIKVQT 202
           SPT N F FW Y                  SP D KSWFLSLPN LRHHYSKGR +KVQ 
Sbjct: 44  SPTPNPFTFWFYFTLIVSIITYFFISLPSLSPPDPKSWFLSLPNSLRHHYSKGRLLKVQI 103

Query: 201 SPTRPPIQVFAIENGPRNGETVLLVHGLGCSSYSFRHVVKYLGSSGIHVVAIDLPGSGFS 22
           S    PI+VFA+ENG +  E V++VHGLG SSYSFR V+  LGS G+  +A DLPG+GFS
Sbjct: 104 SGNLSPIEVFAVENGAKGNENVVIVHGLGLSSYSFRKVLDSLGSKGVRALAFDLPGNGFS 163

Query: 21  DKSSLE 4
           DKS+ E
Sbjct: 164 DKSTAE 169


>ref|XP_003521705.1| PREDICTED: protein AUXIN RESPONSE 4-like [Glycine max]
          Length = 471

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/123 (50%), Positives = 78/123 (63%), Gaps = 1/123 (0%)
 Frame = -3

Query: 378 PTANAFIFWAYXXXXXXXXXXXXXXXXXXS-PQDDKSWFLSLPNDLRHHYSKGRTIKVQT 202
           P  N F FW Y                    PQD K+WFL+LP+ LRHHYS GRTIKVQT
Sbjct: 25  PNNNPFSFWFYFTLSVSLFTLFFVFTSSTLSPQDSKTWFLTLPSPLRHHYSNGRTIKVQT 84

Query: 201 SPTRPPIQVFAIENGPRNGETVLLVHGLGCSSYSFRHVVKYLGSSGIHVVAIDLPGSGFS 22
            P   P+QVF ++ GP + E +L+VHG G SSYS+RH+ K L ++G+HV ++DLPG GFS
Sbjct: 85  HPDETPLQVFTLQEGPTSSENILIVHGQGLSSYSYRHLAKSLAANGLHVTSLDLPGHGFS 144

Query: 21  DKS 13
           D S
Sbjct: 145 DNS 147


>ref|XP_003554658.1| PREDICTED: protein AUXIN RESPONSE 4-like [Glycine max]
          Length = 480

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/119 (50%), Positives = 77/119 (64%)
 Frame = -3

Query: 369 NAFIFWAYXXXXXXXXXXXXXXXXXXSPQDDKSWFLSLPNDLRHHYSKGRTIKVQTSPTR 190
           N F FW Y                  SPQD K+WFL+LP  LRHHYS GRTIKVQT    
Sbjct: 39  NPFSFWFYFTLSVSLLTLFFVLTSSLSPQDPKTWFLTLPPPLRHHYSNGRTIKVQTHSNE 98

Query: 189 PPIQVFAIENGPRNGETVLLVHGLGCSSYSFRHVVKYLGSSGIHVVAIDLPGSGFSDKS 13
            PIQVF ++ GP + E ++++HG G SSYS+RH+ + L ++G+HV ++DLPG GFSDKS
Sbjct: 99  APIQVFTLQEGPTSSENIIILHGQGLSSYSYRHLAQSLAANGLHVTSLDLPGHGFSDKS 157


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