BLASTX nr result

ID: Coptis23_contig00024246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024246
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311502.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
ref|XP_003528540.1| PREDICTED: uncharacterized protein LOC100778...   138   4e-31
ref|XP_002280757.2| PREDICTED: uncharacterized protein LOC100261...   136   2e-30
emb|CBI26899.3| unnamed protein product [Vitis vinifera]              136   2e-30
emb|CAN77007.1| hypothetical protein VITISV_036875 [Vitis vinifera]   136   2e-30

>ref|XP_002311502.1| predicted protein [Populus trichocarpa] gi|222851322|gb|EEE88869.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  139 bits (350), Expect = 2e-31
 Identities = 71/103 (68%), Positives = 78/103 (75%)
 Frame = -2

Query: 310 MDDEVVQRVFEEGGRDYXXXXXXXXXXXXXXXXXXXXXXXLHVSFDHGFYLLVKALQELR 131
           MDDEVVQR+F EGGRDY                       LHVSFDHG+YLLVK+LQELR
Sbjct: 1   MDDEVVQRLFHEGGRDYFQQQPSTSSSSSSSSSSILQSLPLHVSFDHGYYLLVKSLQELR 60

Query: 130 EKKDGLVTVGIGGPSGSGKTSLSEKVASVIGCEVVSMENYRDG 2
           EKK+GLVTVGIGGPSGSGKTSL+EKVASVIGC+V+SMENYR G
Sbjct: 61  EKKEGLVTVGIGGPSGSGKTSLAEKVASVIGCDVISMENYRTG 103


>ref|XP_003528540.1| PREDICTED: uncharacterized protein LOC100778905 [Glycine max]
          Length = 945

 Score =  138 bits (348), Expect = 4e-31
 Identities = 72/103 (69%), Positives = 77/103 (74%)
 Frame = -2

Query: 310 MDDEVVQRVFEEGGRDYXXXXXXXXXXXXXXXXXXXXXXXLHVSFDHGFYLLVKALQELR 131
           MDDEVVQRVF EGGRDY                        HVSFDHG+YLLVK++QELR
Sbjct: 1   MDDEVVQRVFHEGGRDYFQQQPSTSSSSSSILQSLPL----HVSFDHGYYLLVKSIQELR 56

Query: 130 EKKDGLVTVGIGGPSGSGKTSLSEKVASVIGCEVVSMENYRDG 2
           EKKDGLVTVGIGGPSGSGKTSL+EKVASVIGC V+SMENYRDG
Sbjct: 57  EKKDGLVTVGIGGPSGSGKTSLTEKVASVIGCTVISMENYRDG 99



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/55 (63%), Positives = 43/55 (78%)
 Frame = -2

Query: 175 DHGFYLLVKALQELREKKDGLVTVGIGGPSGSGKTSLSEKVASVIGCEVVSMENY 11
           D G  L V+A+Q L E K   V VGIGGPSGSGKTSL+ K+A++IGCEVVS+E+Y
Sbjct: 494 DRGLLLAVQAIQALLENKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESY 548


>ref|XP_002280757.2| PREDICTED: uncharacterized protein LOC100261233 [Vitis vinifera]
          Length = 951

 Score =  136 bits (343), Expect = 2e-30
 Identities = 71/103 (68%), Positives = 77/103 (74%)
 Frame = -2

Query: 310 MDDEVVQRVFEEGGRDYXXXXXXXXXXXXXXXXXXXXXXXLHVSFDHGFYLLVKALQELR 131
           MDDEVVQR F+EGGRDY                        HVSFDHG+YLLVK++QELR
Sbjct: 1   MDDEVVQRAFQEGGRDYYQQQPSTSSSSSSILQSLPL----HVSFDHGYYLLVKSIQELR 56

Query: 130 EKKDGLVTVGIGGPSGSGKTSLSEKVASVIGCEVVSMENYRDG 2
           EKKDGLVTVGIGGPSGSGK+SL+EKVASVIGC VVSMENYRDG
Sbjct: 57  EKKDGLVTVGIGGPSGSGKSSLAEKVASVIGCTVVSMENYRDG 99



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/55 (61%), Positives = 43/55 (78%)
 Frame = -2

Query: 175 DHGFYLLVKALQELREKKDGLVTVGIGGPSGSGKTSLSEKVASVIGCEVVSMENY 11
           D G  L V+A+Q L E K   V VGIGGPSGSGKTSL+ K+A+++GCEVVS+E+Y
Sbjct: 499 DRGLLLSVQAIQALLENKGLPVIVGIGGPSGSGKTSLAHKMANIVGCEVVSLESY 553


>emb|CBI26899.3| unnamed protein product [Vitis vinifera]
          Length = 981

 Score =  136 bits (343), Expect = 2e-30
 Identities = 71/103 (68%), Positives = 77/103 (74%)
 Frame = -2

Query: 310 MDDEVVQRVFEEGGRDYXXXXXXXXXXXXXXXXXXXXXXXLHVSFDHGFYLLVKALQELR 131
           MDDEVVQR F+EGGRDY                        HVSFDHG+YLLVK++QELR
Sbjct: 1   MDDEVVQRAFQEGGRDYYQQQPSTSSSSSSILQSLPL----HVSFDHGYYLLVKSIQELR 56

Query: 130 EKKDGLVTVGIGGPSGSGKTSLSEKVASVIGCEVVSMENYRDG 2
           EKKDGLVTVGIGGPSGSGK+SL+EKVASVIGC VVSMENYRDG
Sbjct: 57  EKKDGLVTVGIGGPSGSGKSSLAEKVASVIGCTVVSMENYRDG 99


>emb|CAN77007.1| hypothetical protein VITISV_036875 [Vitis vinifera]
          Length = 1066

 Score =  136 bits (343), Expect = 2e-30
 Identities = 71/103 (68%), Positives = 77/103 (74%)
 Frame = -2

Query: 310 MDDEVVQRVFEEGGRDYXXXXXXXXXXXXXXXXXXXXXXXLHVSFDHGFYLLVKALQELR 131
           MDDEVVQR F+EGGRDY                        HVSFDHG+YLLVK++QELR
Sbjct: 1   MDDEVVQRAFQEGGRDYYQQQPSTSSSSSSILQSLPL----HVSFDHGYYLLVKSIQELR 56

Query: 130 EKKDGLVTVGIGGPSGSGKTSLSEKVASVIGCEVVSMENYRDG 2
           EKKDGLVTVGIGGPSGSGK+SL+EKVASVIGC VVSMENYRDG
Sbjct: 57  EKKDGLVTVGIGGPSGSGKSSLAEKVASVIGCTVVSMENYRDG 99



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/55 (61%), Positives = 43/55 (78%)
 Frame = -2

Query: 175 DHGFYLLVKALQELREKKDGLVTVGIGGPSGSGKTSLSEKVASVIGCEVVSMENY 11
           D G  L V+A+Q L E K   V VGIGGPSGSGKTSL+ K+A+++GCEVVS+E+Y
Sbjct: 664 DRGLLLSVQAIQALLENKGLPVIVGIGGPSGSGKTSLAHKMANIVGCEVVSLESY 718


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