BLASTX nr result

ID: Coptis23_contig00024245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024245
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like...   252   3e-65
emb|CBI25718.3| unnamed protein product [Vitis vinifera]              252   3e-65
ref|XP_002299457.1| predicted protein [Populus trichocarpa] gi|2...   244   7e-63
ref|XP_003612944.1| Beta-D-xylosidase [Medicago truncatula] gi|3...   235   3e-60
ref|XP_003534261.1| PREDICTED: probable beta-D-xylosidase 6-like...   230   8e-59

>ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like [Vitis vinifera]
          Length = 789

 Score =  252 bits (643), Expect = 3e-65
 Identities = 123/158 (77%), Positives = 139/158 (87%)
 Frame = +2

Query: 2   CDAVATVYEYQHYAKSPEDAVADVLKAGTDINCGTYMLYNTRSAVEQGKVQEVDIDRALF 181
           CDAVATVYEYQHYA SPEDAVADVLKAGTDINCG+YML +T+SA++QGKV+E DIDRALF
Sbjct: 310 CDAVATVYEYQHYANSPEDAVADVLKAGTDINCGSYMLRHTQSAIDQGKVKEEDIDRALF 369

Query: 182 NLFSVQLRLGLFDGNPAKGKFGNLGPKDICTREHRKLAQEAAKQGIVLLKNDKKFLPLQK 361
           NLFSVQ+RLGLFDG+PA G +GNLGPKD+CT+EHR LA EAA+QGIVLLKNDKKFLPL K
Sbjct: 370 NLFSVQMRLGLFDGDPANGLYGNLGPKDVCTKEHRTLALEAARQGIVLLKNDKKFLPLDK 429

Query: 362 KRISSLAIIGPTANNTSNLGGTYTGIPCNPKSFFQGFQ 475
            RISSLAIIGP A+    LGG YTGIPC P+S  +G +
Sbjct: 430 SRISSLAIIGPQADQPF-LGGGYTGIPCKPESLVEGLK 466


>emb|CBI25718.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  252 bits (643), Expect = 3e-65
 Identities = 123/158 (77%), Positives = 139/158 (87%)
 Frame = +2

Query: 2   CDAVATVYEYQHYAKSPEDAVADVLKAGTDINCGTYMLYNTRSAVEQGKVQEVDIDRALF 181
           CDAVATVYEYQHYA SPEDAVADVLKAGTDINCG+YML +T+SA++QGKV+E DIDRALF
Sbjct: 289 CDAVATVYEYQHYANSPEDAVADVLKAGTDINCGSYMLRHTQSAIDQGKVKEEDIDRALF 348

Query: 182 NLFSVQLRLGLFDGNPAKGKFGNLGPKDICTREHRKLAQEAAKQGIVLLKNDKKFLPLQK 361
           NLFSVQ+RLGLFDG+PA G +GNLGPKD+CT+EHR LA EAA+QGIVLLKNDKKFLPL K
Sbjct: 349 NLFSVQMRLGLFDGDPANGLYGNLGPKDVCTKEHRTLALEAARQGIVLLKNDKKFLPLDK 408

Query: 362 KRISSLAIIGPTANNTSNLGGTYTGIPCNPKSFFQGFQ 475
            RISSLAIIGP A+    LGG YTGIPC P+S  +G +
Sbjct: 409 SRISSLAIIGPQADQPF-LGGGYTGIPCKPESLVEGLK 445


>ref|XP_002299457.1| predicted protein [Populus trichocarpa] gi|222846715|gb|EEE84262.1|
           predicted protein [Populus trichocarpa]
          Length = 780

 Score =  244 bits (622), Expect = 7e-63
 Identities = 116/159 (72%), Positives = 138/159 (86%)
 Frame = +2

Query: 2   CDAVATVYEYQHYAKSPEDAVADVLKAGTDINCGTYMLYNTRSAVEQGKVQEVDIDRALF 181
           CDAVAT++EYQ+Y+KSPEDAVA  LKAG DINCGTY+L N +SAVE+GK+QE DIDRAL 
Sbjct: 299 CDAVATIFEYQNYSKSPEDAVAIALKAGMDINCGTYVLRNAQSAVEKGKLQEEDIDRALH 358

Query: 182 NLFSVQLRLGLFDGNPAKGKFGNLGPKDICTREHRKLAQEAAKQGIVLLKNDKKFLPLQK 361
           NLFSVQLRLGLFDG+P KG+FG LGPK++CT+EH+ LA EAA+QGIVLLKNDKK LPL K
Sbjct: 359 NLFSVQLRLGLFDGDPRKGQFGKLGPKNVCTKEHKTLALEAARQGIVLLKNDKKLLPLNK 418

Query: 362 KRISSLAIIGPTANNTSNLGGTYTGIPCNPKSFFQGFQA 478
           K +SSLAIIGP AN  ++LGG YTG PC+P+S F+G +A
Sbjct: 419 KAVSSLAIIGPLANMANSLGGDYTGYPCDPQSLFEGLKA 457


>ref|XP_003612944.1| Beta-D-xylosidase [Medicago truncatula] gi|355514279|gb|AES95902.1|
           Beta-D-xylosidase [Medicago truncatula]
          Length = 783

 Score =  235 bits (599), Expect = 3e-60
 Identities = 116/158 (73%), Positives = 134/158 (84%)
 Frame = +2

Query: 2   CDAVATVYEYQHYAKSPEDAVADVLKAGTDINCGTYMLYNTRSAVEQGKVQEVDIDRALF 181
           CDAVATV+EYQ YAKS EDAVADVLKAG DINCGT+ML +T SA+EQG V+E D+DRALF
Sbjct: 300 CDAVATVFEYQKYAKSAEDAVADVLKAGMDINCGTFMLRHTESAIEQGLVKEEDLDRALF 359

Query: 182 NLFSVQLRLGLFDGNPAKGKFGNLGPKDICTREHRKLAQEAAKQGIVLLKNDKKFLPLQK 361
           NLFSVQ+RLGLF+G+P KGKFG LGP+D+CT EH+KLA EAA+QGIVLLKND KFLPL K
Sbjct: 360 NLFSVQMRLGLFNGDPEKGKFGKLGPQDVCTPEHKKLALEAARQGIVLLKNDNKFLPLDK 419

Query: 362 KRISSLAIIGPTANNTSNLGGTYTGIPCNPKSFFQGFQ 475
           K   SLAIIGP A  TS LGG Y+GIPC+P+S + G +
Sbjct: 420 KDRVSLAIIGPMA-TTSELGGGYSGIPCSPRSLYDGLK 456


>ref|XP_003534261.1| PREDICTED: probable beta-D-xylosidase 6-like [Glycine max]
          Length = 780

 Score =  230 bits (587), Expect = 8e-59
 Identities = 112/156 (71%), Positives = 133/156 (85%)
 Frame = +2

Query: 2   CDAVATVYEYQHYAKSPEDAVADVLKAGTDINCGTYMLYNTRSAVEQGKVQEVDIDRALF 181
           CDAVATVYEYQ YAKS EDAVADVLKAG DINCGT+ML +T SA+EQGKV+E D+DRAL 
Sbjct: 297 CDAVATVYEYQKYAKSQEDAVADVLKAGMDINCGTFMLRHTESAIEQGKVKEEDLDRALL 356

Query: 182 NLFSVQLRLGLFDGNPAKGKFGNLGPKDICTREHRKLAQEAAKQGIVLLKNDKKFLPLQK 361
           NLFSVQLRLGLFDG+P +G+FG LGPKD+CT+EH+ LA +AA+QGIVLLKNDKKFLPL +
Sbjct: 357 NLFSVQLRLGLFDGDPIRGRFGKLGPKDVCTQEHKTLALDAARQGIVLLKNDKKFLPLDR 416

Query: 362 KRISSLAIIGPTANNTSNLGGTYTGIPCNPKSFFQG 469
              +SLA+IGP A  T+ LGG Y+GIPC+  S ++G
Sbjct: 417 DIGASLAVIGPLA-TTTKLGGGYSGIPCSSSSLYEG 451


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