BLASTX nr result

ID: Coptis23_contig00024243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024243
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280023.1| PREDICTED: mitochondrial substrate carrier f...   202   2e-83
ref|XP_002329828.1| predicted protein [Populus trichocarpa] gi|2...   206   7e-83
ref|XP_004146612.1| PREDICTED: mitochondrial substrate carrier f...   207   9e-79
ref|XP_003541528.1| PREDICTED: mitochondrial substrate carrier f...   183   3e-73
ref|XP_003528461.1| PREDICTED: mitochondrial substrate carrier f...   179   3e-73

>ref|XP_002280023.1| PREDICTED: mitochondrial substrate carrier family protein S [Vitis
           vinifera] gi|297740410|emb|CBI30592.3| unnamed protein
           product [Vitis vinifera]
          Length = 303

 Score =  202 bits (514), Expect(2) = 2e-83
 Identities = 96/133 (72%), Positives = 116/133 (87%)
 Frame = -1

Query: 664 SSAYKDYIAGLAAGVSTVIIGHPFDTVKVKLQKHNTEAHGIKYRNALHCTARILKNEGVR 485
           +S YK+Y+AGL AGV+TV IGHPFDTVKVKLQKHNTEAHG+KY+N LHCTARI+K+EGV+
Sbjct: 4   TSGYKEYVAGLLAGVATVGIGHPFDTVKVKLQKHNTEAHGMKYKNGLHCTARIVKSEGVK 63

Query: 484 GLYRGATSSYFGMAFESSILFGLYSQTKQALQGDKNRSGPQLQVIIPSAAFGGAIISFIL 305
           GLYRGATSS+ GMAFESS+LFG+YS+TKQ +Q     + PQ QVIIPSAA+ GAIISF+L
Sbjct: 64  GLYRGATSSFLGMAFESSLLFGIYSRTKQKMQEGLQNTRPQPQVIIPSAAYSGAIISFVL 123

Query: 304 CPSELVKVRCKFK 266
           CPSEL+K R + +
Sbjct: 124 CPSELLKCRMQIQ 136



 Score =  133 bits (334), Expect(2) = 2e-83
 Identities = 67/92 (72%), Positives = 76/92 (82%)
 Frame = -3

Query: 278 MQVQGTDSLVLKHTRYSSPLDCALKTIKDEGVTGLFRGGVTTLLRESIGNAVFFSTYEYI 99
           MQ+QGTDSLV K +RYSSPLDCALKT+K EGVTG+FRGG+TTLLRES GNAVFFS YEY+
Sbjct: 133 MQIQGTDSLVPKSSRYSSPLDCALKTMKTEGVTGIFRGGLTTLLRESFGNAVFFSVYEYV 192

Query: 98  RHYMQLQRNPALSGSNDQPNALIDVGVGIVSG 3
           R+YM LQ   A S  ND    LIDVG+GIV+G
Sbjct: 193 RYYMHLQLKAASSDHND----LIDVGIGIVTG 220


>ref|XP_002329828.1| predicted protein [Populus trichocarpa] gi|222870890|gb|EEF08021.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  206 bits (523), Expect(2) = 7e-83
 Identities = 99/131 (75%), Positives = 115/131 (87%)
 Frame = -1

Query: 658 AYKDYIAGLAAGVSTVIIGHPFDTVKVKLQKHNTEAHGIKYRNALHCTARILKNEGVRGL 479
           AYK+Y+AGL AGV+TVI GHPFDTVKV LQKHNTEAHGIKY+N LHCTARIL+ EGV+GL
Sbjct: 6   AYKEYLAGLLAGVATVITGHPFDTVKVMLQKHNTEAHGIKYKNGLHCTARILQTEGVKGL 65

Query: 478 YRGATSSYFGMAFESSILFGLYSQTKQALQGDKNRSGPQLQVIIPSAAFGGAIISFILCP 299
           YRGATSS+ G+AFESS+LFG+YSQTKQ+LQG      P+ QVIIPSAA+GGAIISF+LCP
Sbjct: 66  YRGATSSFVGVAFESSLLFGIYSQTKQSLQGGGQSDVPRPQVIIPSAAYGGAIISFVLCP 125

Query: 298 SELVKVRCKFK 266
           SELVK R + +
Sbjct: 126 SELVKCRMQIQ 136



 Score =  128 bits (321), Expect(2) = 7e-83
 Identities = 63/92 (68%), Positives = 77/92 (83%)
 Frame = -3

Query: 278 MQVQGTDSLVLKHTRYSSPLDCALKTIKDEGVTGLFRGGVTTLLRESIGNAVFFSTYEYI 99
           MQ+QGTDSLV K +RYSSPLDCAL+T+K+EGVTG+FRGG TTLLRESIG+AVFFS YEY+
Sbjct: 133 MQIQGTDSLVPKFSRYSSPLDCALQTMKNEGVTGIFRGGFTTLLRESIGSAVFFSVYEYV 192

Query: 98  RHYMQLQRNPALSGSNDQPNALIDVGVGIVSG 3
           R+YM LQ  P LS  ++    L D+G+GIV+G
Sbjct: 193 RYYMHLQLKPTLSDHSN----LTDMGIGIVTG 220


>ref|XP_004146612.1| PREDICTED: mitochondrial substrate carrier family protein S-like
           [Cucumis sativus] gi|449511666|ref|XP_004164021.1|
           PREDICTED: mitochondrial substrate carrier family
           protein S-like [Cucumis sativus]
          Length = 305

 Score =  207 bits (527), Expect(2) = 9e-79
 Identities = 103/136 (75%), Positives = 116/136 (85%)
 Frame = -1

Query: 685 MGDESSSSSAYKDYIAGLAAGVSTVIIGHPFDTVKVKLQKHNTEAHGIKYRNALHCTARI 506
           MGD SS    YKDY+AGL AGV+TVIIGHPFDTVKVKLQKHNTE+ GI YR  LHCTARI
Sbjct: 1   MGDTSS----YKDYVAGLIAGVATVIIGHPFDTVKVKLQKHNTESRGITYRGGLHCTARI 56

Query: 505 LKNEGVRGLYRGATSSYFGMAFESSILFGLYSQTKQALQGDKNRSGPQLQVIIPSAAFGG 326
           LK EGVRGLYRGATSS+ G++FESS+LFG+YS+TKQ+LQG      P+ QV+IPSAA+GG
Sbjct: 57  LKTEGVRGLYRGATSSFIGVSFESSLLFGIYSRTKQSLQGGDQNGRPRPQVVIPSAAYGG 116

Query: 325 AIISFILCPSELVKVR 278
           AIISFILCPSELVK R
Sbjct: 117 AIISFILCPSELVKCR 132



 Score =  112 bits (281), Expect(2) = 9e-79
 Identities = 59/92 (64%), Positives = 71/92 (77%)
 Frame = -3

Query: 278 MQVQGTDSLVLKHTRYSSPLDCALKTIKDEGVTGLFRGGVTTLLRESIGNAVFFSTYEYI 99
           MQVQGTDSLV   +RY  P+DCALKTIK EG TG+FRGG TT LRESIGNAVFFS YE +
Sbjct: 133 MQVQGTDSLVPVSSRYRGPVDCALKTIKTEGATGIFRGGFTTFLRESIGNAVFFSVYENV 192

Query: 98  RHYMQLQRNPALSGSNDQPNALIDVGVGIVSG 3
           R+YM  Q + + S SN   N L+D+G+GI++G
Sbjct: 193 RYYMHSQLH-STSNSNVHGN-LMDMGIGILTG 222


>ref|XP_003541528.1| PREDICTED: mitochondrial substrate carrier family protein S-like
           [Glycine max]
          Length = 305

 Score =  183 bits (465), Expect(2) = 3e-73
 Identities = 89/134 (66%), Positives = 106/134 (79%)
 Frame = -1

Query: 667 SSSAYKDYIAGLAAGVSTVIIGHPFDTVKVKLQKHNTEAHGIKYRNALHCTARILKNEGV 488
           SSS YK+Y+AGL+AGV+ V  GHPFDTVKV LQKHN EAH I+YRN LHCTARILK EG+
Sbjct: 5   SSSGYKEYVAGLSAGVAVVATGHPFDTVKVMLQKHNAEAHMIQYRNGLHCTARILKTEGI 64

Query: 487 RGLYRGATSSYFGMAFESSILFGLYSQTKQALQGDKNRSGPQLQVIIPSAAFGGAIISFI 308
           +GLYRGAT S+ GMA E S+ FG+YSQTK  LQG      P+ QVIIPSAAF GAIISF+
Sbjct: 65  KGLYRGATPSFVGMAVEGSLFFGIYSQTKVYLQGGVQSGEPRPQVIIPSAAFSGAIISFV 124

Query: 307 LCPSELVKVRCKFK 266
           L P++L+K R + +
Sbjct: 125 LGPTDLIKCRMQIQ 138



 Score =  118 bits (295), Expect(2) = 3e-73
 Identities = 58/92 (63%), Positives = 71/92 (77%)
 Frame = -3

Query: 278 MQVQGTDSLVLKHTRYSSPLDCALKTIKDEGVTGLFRGGVTTLLRESIGNAVFFSTYEYI 99
           MQ+QGTDSLV K +RYSSPLDCALKT+K EGV G+FRGG  TLLRESIGNAVFFS YEY+
Sbjct: 135 MQIQGTDSLVPKSSRYSSPLDCALKTVKAEGVKGIFRGGCATLLRESIGNAVFFSVYEYV 194

Query: 98  RHYMQLQRNPALSGSNDQPNALIDVGVGIVSG 3
           R++M    +  +  ++     L+D+GVGI SG
Sbjct: 195 RYHM----HSNIKANSSNHRNLVDIGVGIASG 222


>ref|XP_003528461.1| PREDICTED: mitochondrial substrate carrier family protein S-like
           [Glycine max]
          Length = 305

 Score =  179 bits (455), Expect(2) = 3e-73
 Identities = 88/134 (65%), Positives = 104/134 (77%)
 Frame = -1

Query: 667 SSSAYKDYIAGLAAGVSTVIIGHPFDTVKVKLQKHNTEAHGIKYRNALHCTARILKNEGV 488
           SSS YK+Y AGL AGV+ V  GHPFDTVKV LQKHN EAH I+Y+N  HCTARILK EG+
Sbjct: 5   SSSGYKEYAAGLFAGVAAVATGHPFDTVKVMLQKHNAEAHKIQYKNGWHCTARILKTEGI 64

Query: 487 RGLYRGATSSYFGMAFESSILFGLYSQTKQALQGDKNRSGPQLQVIIPSAAFGGAIISFI 308
           +GLYRGATSS+ GMA E S+ FG+YSQTK  LQG      P+ QVIIPSAA+ GAIISF+
Sbjct: 65  KGLYRGATSSFVGMAVEGSLFFGIYSQTKVYLQGGVQSGEPRPQVIIPSAAYSGAIISFV 124

Query: 307 LCPSELVKVRCKFK 266
           L P+EL+K R + +
Sbjct: 125 LGPTELIKCRMQIQ 138



 Score =  122 bits (305), Expect(2) = 3e-73
 Identities = 62/92 (67%), Positives = 73/92 (79%)
 Frame = -3

Query: 278 MQVQGTDSLVLKHTRYSSPLDCALKTIKDEGVTGLFRGGVTTLLRESIGNAVFFSTYEYI 99
           MQ+QGTDSLV K +RY+SPLDCALKT+K EGV G+FRGG  TLLRESIGNAVFFS YEY+
Sbjct: 135 MQIQGTDSLVPKSSRYNSPLDCALKTVKTEGVKGIFRGGCATLLRESIGNAVFFSVYEYV 194

Query: 98  RHYMQLQRNPALSGSNDQPNALIDVGVGIVSG 3
           R+YM      A   S+D  N L+D+G+GIVSG
Sbjct: 195 RYYMHSNIKAA---SSDYTN-LVDIGIGIVSG 222


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