BLASTX nr result

ID: Coptis23_contig00024237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024237
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273853.2| PREDICTED: uncharacterized protein LOC100258...   154   7e-36
emb|CBI17170.3| unnamed protein product [Vitis vinifera]              154   7e-36
ref|XP_002314295.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36
ref|NP_001241314.1| uncharacterized protein LOC100779715 [Glycin...   152   3e-35
ref|NP_190091.2| uncharacterized protein [Arabidopsis thaliana] ...   151   6e-35

>ref|XP_002273853.2| PREDICTED: uncharacterized protein LOC100258439 [Vitis vinifera]
          Length = 176

 Score =  154 bits (389), Expect = 7e-36
 Identities = 75/105 (71%), Positives = 86/105 (81%), Gaps = 2/105 (1%)
 Frame = -3

Query: 462 IVVAATVVGA--TYLVRTTKASEKSNAEQPMRDCEDCGGSGICSECRGEGFVLKRMSDEK 289
           + +AATVVGA  T LVR ++ SE +  E P++ CEDCGGSGICSEC GEGFVLK++S+  
Sbjct: 73  VAIAATVVGAAATLLVRRSRPSEAT--EIPLKICEDCGGSGICSECNGEGFVLKKLSEAS 130

Query: 288 AEKARLAASNMATRYTAGLPKKWSYCTKCSSGRSCIVCGGSGRLS 154
           AEKARL A NMATRYTAGLPKKWSYCTKCSS RSC  CGGSG+LS
Sbjct: 131 AEKARLTAKNMATRYTAGLPKKWSYCTKCSSARSCSTCGGSGKLS 175


>emb|CBI17170.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score =  154 bits (389), Expect = 7e-36
 Identities = 75/105 (71%), Positives = 86/105 (81%), Gaps = 2/105 (1%)
 Frame = -3

Query: 462  IVVAATVVGA--TYLVRTTKASEKSNAEQPMRDCEDCGGSGICSECRGEGFVLKRMSDEK 289
            + +AATVVGA  T LVR ++ SE +  E P++ CEDCGGSGICSEC GEGFVLK++S+  
Sbjct: 824  VAIAATVVGAAATLLVRRSRPSEAT--EIPLKICEDCGGSGICSECNGEGFVLKKLSEAS 881

Query: 288  AEKARLAASNMATRYTAGLPKKWSYCTKCSSGRSCIVCGGSGRLS 154
            AEKARL A NMATRYTAGLPKKWSYCTKCSS RSC  CGGSG+LS
Sbjct: 882  AEKARLTAKNMATRYTAGLPKKWSYCTKCSSARSCSTCGGSGKLS 926


>ref|XP_002314295.1| predicted protein [Populus trichocarpa] gi|222850703|gb|EEE88250.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  154 bits (388), Expect = 9e-36
 Identities = 74/105 (70%), Positives = 85/105 (80%), Gaps = 2/105 (1%)
 Frame = -3

Query: 462 IVVAATVVGA--TYLVRTTKASEKSNAEQPMRDCEDCGGSGICSECRGEGFVLKRMSDEK 289
           + +AAT VGA  T LVR  K SE    E P++ CEDCGGSGICSEC GEGFVLK++S+E 
Sbjct: 60  VAIAATAVGAAITLLVRRNKPSEAD--EIPLKTCEDCGGSGICSECSGEGFVLKKLSEES 117

Query: 288 AEKARLAASNMATRYTAGLPKKWSYCTKCSSGRSCIVCGGSGRLS 154
           AE+ARL+A NMATRYTAGLPKKWSYCTKCSS RSC  CGGSG+L+
Sbjct: 118 AERARLSAKNMATRYTAGLPKKWSYCTKCSSARSCSACGGSGKLN 162


>ref|NP_001241314.1| uncharacterized protein LOC100779715 [Glycine max]
           gi|255640844|gb|ACU20705.1| unknown [Glycine max]
          Length = 148

 Score =  152 bits (384), Expect = 3e-35
 Identities = 74/105 (70%), Positives = 85/105 (80%), Gaps = 2/105 (1%)
 Frame = -3

Query: 462 IVVAATVVGA--TYLVRTTKASEKSNAEQPMRDCEDCGGSGICSECRGEGFVLKRMSDEK 289
           + VA TVVGA  T LV+ +K SE S  +   + CEDCGGSGICSEC+GEGFVL++ SDE 
Sbjct: 45  MAVAVTVVGAAATLLVKRSKTSESSQIQ--FKACEDCGGSGICSECKGEGFVLRKRSDES 102

Query: 288 AEKARLAASNMATRYTAGLPKKWSYCTKCSSGRSCIVCGGSGRLS 154
           AEKAR+ A NMATR+TAGLPKKWSYCTKCSSGRSC  CGGSG+LS
Sbjct: 103 AEKARVQAKNMATRFTAGLPKKWSYCTKCSSGRSCSTCGGSGKLS 147


>ref|NP_190091.2| uncharacterized protein [Arabidopsis thaliana]
           gi|30692507|ref|NP_850657.1| uncharacterized protein
           [Arabidopsis thaliana] gi|42572581|ref|NP_974386.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|222423502|dbj|BAH19721.1| AT3G45050 [Arabidopsis
           thaliana] gi|332644463|gb|AEE77984.1| uncharacterized
           protein [Arabidopsis thaliana]
           gi|332644464|gb|AEE77985.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332644465|gb|AEE77986.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 158

 Score =  151 bits (381), Expect = 6e-35
 Identities = 77/107 (71%), Positives = 88/107 (82%), Gaps = 3/107 (2%)
 Frame = -3

Query: 462 IVVAATVVG--ATYLVR-TTKASEKSNAEQPMRDCEDCGGSGICSECRGEGFVLKRMSDE 292
           I +AATVVG  AT LVR   KASE+  AE  M++CE C GSGIC EC+GEGFVLK++SD 
Sbjct: 54  IAIAATVVGTAATILVRRNNKASEE--AEASMKECEACLGSGICPECKGEGFVLKKLSDA 111

Query: 291 KAEKARLAASNMATRYTAGLPKKWSYCTKCSSGRSCIVCGGSGRLSL 151
            AEKARLAA NMATRYTAGLPKKWSYCTKCSS RSC++CGGSG+ S+
Sbjct: 112 NAEKARLAAKNMATRYTAGLPKKWSYCTKCSSTRSCMICGGSGKTSI 158


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