BLASTX nr result

ID: Coptis23_contig00024231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024231
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537613.1| PREDICTED: disease resistance RPP8-like prot...    64   1e-08
ref|XP_003517205.1| PREDICTED: disease resistance RPP8-like prot...    63   3e-08
ref|XP_002891560.1| hypothetical protein ARALYDRAFT_474150 [Arab...    60   2e-07
ref|NP_001237924.1| CC-NBS-LRR class disease resistance protein ...    60   2e-07
ref|XP_002872017.1| predicted protein [Arabidopsis lyrata subsp....    59   3e-07

>ref|XP_003537613.1| PREDICTED: disease resistance RPP8-like protein 3-like [Glycine max]
          Length = 912

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/92 (36%), Positives = 51/92 (55%)
 Frame = -2

Query: 287  PNLKILFLGVYSYKGREMVFSAEGFPQLHFLVFHGFNYVENWTVGNCAXXXXXXXXXXXP 108
            PNLK+L LG  +Y   E+ F+AEGFPQLH L       +E WTV   A            
Sbjct: 797  PNLKMLILGKGAYNWPELNFNAEGFPQLHILRLVLLKELEEWTVEESAMPRLENMVIDRC 856

Query: 107  DKLSKLPDGLRSLTHLQIVEIAEQTGRFKDRV 12
            +KL K+P+GL+++T L+ ++I      F+ ++
Sbjct: 857  EKLKKIPEGLKAITSLKKLKIIGMPVEFEHKL 888


>ref|XP_003517205.1| PREDICTED: disease resistance RPP8-like protein 3-like [Glycine max]
          Length = 910

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/92 (35%), Positives = 50/92 (54%)
 Frame = -2

Query: 287  PNLKILFLGVYSYKGREMVFSAEGFPQLHFLVFHGFNYVENWTVGNCAXXXXXXXXXXXP 108
            PNLK+L LG  +Y   E+ F+ EGFPQLH L       +E WTV   A            
Sbjct: 795  PNLKVLILGKGAYNWPELNFNGEGFPQLHILRLVLLKELEEWTVEENAMPRLENMVIDRC 854

Query: 107  DKLSKLPDGLRSLTHLQIVEIAEQTGRFKDRV 12
            +KL K+P+GL+++T L+ ++I      F+ ++
Sbjct: 855  EKLKKIPEGLKAITSLKKLKIIGMPVEFEHKL 886


>ref|XP_002891560.1| hypothetical protein ARALYDRAFT_474150 [Arabidopsis lyrata subsp.
            lyrata] gi|297337402|gb|EFH67819.1| hypothetical protein
            ARALYDRAFT_474150 [Arabidopsis lyrata subsp. lyrata]
          Length = 859

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/92 (38%), Positives = 46/92 (50%)
 Frame = -2

Query: 287  PNLKILFLGVYSYKGREMVFSAEGFPQLHFLVFHGFNYVENWTVGNCAXXXXXXXXXXXP 108
            PNLKIL L   S+ G ++  S  GFPQLH L       +E WTV + A            
Sbjct: 745  PNLKILQLFEGSFVGSKLCCSKNGFPQLHSLTLSELENLEEWTVEDGAMMRLVSMELKCC 804

Query: 107  DKLSKLPDGLRSLTHLQIVEIAEQTGRFKDRV 12
             +L  +P+G R L +LQ VEI      FKD++
Sbjct: 805  KQLKSVPEGTRFLKNLQEVEIGNMKKAFKDKL 836


>ref|NP_001237924.1| CC-NBS-LRR class disease resistance protein [Glycine max]
            gi|212717123|gb|ACJ37403.1| CC-NBS-LRR class disease
            resistance protein [Glycine max]
          Length = 979

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/94 (34%), Positives = 50/94 (53%)
 Frame = -2

Query: 287  PNLKILFLGVYSYKGREMVFSAEGFPQLHFLVFHGFNYVENWTVGNCAXXXXXXXXXXXP 108
            PNL+ L L + S+ G+++  S+ GFPQL  LV +    +E W +G  A            
Sbjct: 806  PNLRFLELQLDSFMGKKLFCSSNGFPQLKSLVIYDLPNLEEWKLGKGAMPSLRKLEIANC 865

Query: 107  DKLSKLPDGLRSLTHLQIVEIAEQTGRFKDRVEE 6
             KL ++PDGLR +  LQ +EI      F+ ++E+
Sbjct: 866  TKLERVPDGLRFVATLQDLEIRSMFAVFRTKLEK 899


>ref|XP_002872017.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297317854|gb|EFH48276.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 926

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/91 (35%), Positives = 48/91 (52%)
 Frame = -2

Query: 284  NLKILFLGVYSYKGREMVFSAEGFPQLHFLVFHGFNYVENWTVGNCAXXXXXXXXXXXPD 105
            NLKI+ L + ++ GR+MV S  GFP+LH L F   + +E W V   +             
Sbjct: 812  NLKIVSLELNAFTGRKMVCSKSGFPKLHTLEFSILDNLEEWVVEEESMPFLCRLEINDCR 871

Query: 104  KLSKLPDGLRSLTHLQIVEIAEQTGRFKDRV 12
            KL  LPDGL+ +T L+ + +      FKD++
Sbjct: 872  KLKSLPDGLKYITTLEELRVGWMQNEFKDKL 902


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