BLASTX nr result

ID: Coptis23_contig00024219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024219
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280266.2| PREDICTED: ABC transporter B family member 2...   226   2e-57
emb|CAN61922.1| hypothetical protein VITISV_036650 [Vitis vinifera]   218   8e-55
ref|XP_002321878.1| ABC transporter family protein [Populus tric...   216   3e-54
ref|XP_003534020.1| PREDICTED: ABC transporter B family member 2...   214   9e-54
ref|XP_002510849.1| ATNAP8, putative [Ricinus communis] gi|22354...   211   1e-52

>ref|XP_002280266.2| PREDICTED: ABC transporter B family member 28-like [Vitis vinifera]
           gi|297741119|emb|CBI31850.3| unnamed protein product
           [Vitis vinifera]
          Length = 717

 Score =  226 bits (577), Expect = 2e-57
 Identities = 117/208 (56%), Positives = 148/208 (71%)
 Frame = +2

Query: 23  AYVSAPASDPNISENDEPKLDQSNSTETTVRSHDPPATISWPLVFXXXXXXXXXXXXXXX 202
           AYVS PASDP I+E D PK++ SN       + +PP+ IS  L++               
Sbjct: 61  AYVSGPASDPIITEPD-PKVESSNDAHD--ETVEPPSAISSSLLWSLLMRYKLRLA---- 113

Query: 203 XXXXXXXXXXXXXXXXXXISVATLIGCTSCTLTMPILSGQFFEVIIGAKPDPLWKLLSTI 382
                             +S  TLIGC++CTL+MP+ SG+FFEV+IG +P+PLW+LLST+
Sbjct: 114 ------------------VSAVTLIGCSACTLSMPLFSGRFFEVLIGTRPEPLWRLLSTV 155

Query: 383 AVFYTLEPIFTVIFVTNLNTVWEKVMTKLRAIVFRRILIQKVEFFDRYKVGELTGLLTSD 562
            V YTLEP+ T+I+V N+NT+WEKVM+ LRA +FRR+LIQKVEFFDRYKVGELT LLTSD
Sbjct: 156 GVLYTLEPVLTIIYVVNMNTIWEKVMSTLRAQIFRRLLIQKVEFFDRYKVGELTALLTSD 215

Query: 563 LGSIKNVVSENISRDRGFRALSEVVGTI 646
           LGS+K++VSENISRDRGFRALSEV+GTI
Sbjct: 216 LGSLKDIVSENISRDRGFRALSEVIGTI 243


>emb|CAN61922.1| hypothetical protein VITISV_036650 [Vitis vinifera]
          Length = 725

 Score =  218 bits (555), Expect = 8e-55
 Identities = 113/203 (55%), Positives = 143/203 (70%)
 Frame = +2

Query: 23  AYVSAPASDPNISENDEPKLDQSNSTETTVRSHDPPATISWPLVFXXXXXXXXXXXXXXX 202
           AYVS PASDP I+E D PK++ SN       + +PP+ IS  L++               
Sbjct: 61  AYVSGPASDPIITEPD-PKVESSNDAHD--ETVEPPSAISSSLLWSLLMRYKLRLA---- 113

Query: 203 XXXXXXXXXXXXXXXXXXISVATLIGCTSCTLTMPILSGQFFEVIIGAKPDPLWKLLSTI 382
                             +S  TLIGC++CTL+MP+ SG+FFEV+IG +P+PLW+LLST+
Sbjct: 114 ------------------VSAVTLIGCSACTLSMPLFSGRFFEVLIGTRPEPLWRLLSTV 155

Query: 383 AVFYTLEPIFTVIFVTNLNTVWEKVMTKLRAIVFRRILIQKVEFFDRYKVGELTGLLTSD 562
            V YTLEP+ T+I+V N+NT+WEKVM+ LRA +FRR+LIQKVEFFDRYKVGELT LLTSD
Sbjct: 156 GVLYTLEPVLTIIYVVNMNTIWEKVMSTLRAQIFRRLLIQKVEFFDRYKVGELTALLTSD 215

Query: 563 LGSIKNVVSENISRDRGFRALSE 631
           LGS+K++VSENISRDRGFRALSE
Sbjct: 216 LGSLKDIVSENISRDRGFRALSE 238


>ref|XP_002321878.1| ABC transporter family protein [Populus trichocarpa]
           gi|222868874|gb|EEF06005.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 562

 Score =  216 bits (550), Expect = 3e-54
 Identities = 115/212 (54%), Positives = 140/212 (66%)
 Frame = +2

Query: 11  TITCAYVSAPASDPNISENDEPKLDQSNSTETTVRSHDPPATISWPLVFXXXXXXXXXXX 190
           TIT AYV+ PASDP ++E D  KLD +++  +          ISW L++           
Sbjct: 57  TITSAYVTGPASDPIVTEPDH-KLDPTDNDSSVTEKVQSTELISWGLLWSLLAKHKVRLV 115

Query: 191 XXXXXXXXXXXXXXXXXXXXXXISVATLIGCTSCTLTMPILSGQFFEVIIGAKPDPLWKL 370
                                 +   TL+GCTSCTL+MPI SG+FFEV+IGA+P+PLW+L
Sbjct: 116 ----------------------VCAFTLVGCTSCTLSMPIFSGRFFEVLIGARPEPLWRL 153

Query: 371 LSTIAVFYTLEPIFTVIFVTNLNTVWEKVMTKLRAIVFRRILIQKVEFFDRYKVGELTGL 550
           LS + V Y LEPIFTVIFV N+NTVWEKVM  LRA +FRR+LIQKVEFFDRYKVGEL+ L
Sbjct: 154 LSKMGVLYALEPIFTVIFVVNMNTVWEKVMATLRAQIFRRVLIQKVEFFDRYKVGELSAL 213

Query: 551 LTSDLGSIKNVVSENISRDRGFRALSEVVGTI 646
           L SDLGS K++VSENISRDRGFRA SE   +I
Sbjct: 214 LMSDLGSFKDIVSENISRDRGFRAFSEASHSI 245


>ref|XP_003534020.1| PREDICTED: ABC transporter B family member 28-like [Glycine max]
          Length = 710

 Score =  214 bits (546), Expect = 9e-54
 Identities = 113/208 (54%), Positives = 141/208 (67%)
 Frame = +2

Query: 23  AYVSAPASDPNISENDEPKLDQSNSTETTVRSHDPPATISWPLVFXXXXXXXXXXXXXXX 202
           AY +APASDPN ++ D PKL  S+      R+      I+W L+                
Sbjct: 57  AYAAAPASDPNFADPD-PKLAGSDPENARPRN-----VITWSLL---------------- 94

Query: 203 XXXXXXXXXXXXXXXXXXISVATLIGCTSCTLTMPILSGQFFEVIIGAKPDPLWKLLSTI 382
                             ++VATL  C++CTL+MPI SG+FFEV+IG +P+PLWKLLS I
Sbjct: 95  ------CTLLMKHKLRLALAVATLFACSTCTLSMPIFSGRFFEVLIGTRPEPLWKLLSKI 148

Query: 383 AVFYTLEPIFTVIFVTNLNTVWEKVMTKLRAIVFRRILIQKVEFFDRYKVGELTGLLTSD 562
            V Y LEP+ T+IFV N+N VWEK+M+ LRA +F RILIQK+EFFD+YKVGELTGLLTSD
Sbjct: 149 GVLYALEPLLTIIFVINMNIVWEKIMSTLRAQIFGRILIQKIEFFDKYKVGELTGLLTSD 208

Query: 563 LGSIKNVVSENISRDRGFRALSEVVGTI 646
           LGS+KN+VSEN+SRDRGFRALSEV+GTI
Sbjct: 209 LGSLKNIVSENVSRDRGFRALSEVIGTI 236


>ref|XP_002510849.1| ATNAP8, putative [Ricinus communis] gi|223549964|gb|EEF51451.1|
           ATNAP8, putative [Ricinus communis]
          Length = 712

 Score =  211 bits (536), Expect = 1e-52
 Identities = 109/212 (51%), Positives = 145/212 (68%)
 Frame = +2

Query: 11  TITCAYVSAPASDPNISENDEPKLDQSNSTETTVRSHDPPATISWPLVFXXXXXXXXXXX 190
           TI CAYVS P   P + E  EPK+  S++T   V+  + P  ISW L++           
Sbjct: 55  TIPCAYVSGP---PTVGE-PEPKVKASDATSEKVQ--ESPKVISWGLLWSLLLNHKLRLA 108

Query: 191 XXXXXXXXXXXXXXXXXXXXXXISVATLIGCTSCTLTMPILSGQFFEVIIGAKPDPLWKL 370
                                 +   +L+ CT+CTL+ PI SG+FFEV+IGA+P+PLW+L
Sbjct: 109 ----------------------VCAMSLVACTTCTLSQPIFSGRFFEVLIGARPEPLWRL 146

Query: 371 LSTIAVFYTLEPIFTVIFVTNLNTVWEKVMTKLRAIVFRRILIQKVEFFDRYKVGELTGL 550
           L+ +A+ Y+LEPIFTVIF+ N+NTVWEKVM+ LRA  F R+LIQKVEFFDRYKVGEL+ L
Sbjct: 147 LTKVAIVYSLEPIFTVIFIVNMNTVWEKVMSTLRAHTFGRVLIQKVEFFDRYKVGELSAL 206

Query: 551 LTSDLGSIKNVVSENISRDRGFRALSEVVGTI 646
           LT+++GS+K++VSEN+SRDRGFRA+SEV+GTI
Sbjct: 207 LTTEMGSLKDIVSENVSRDRGFRAISEVIGTI 238


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