BLASTX nr result
ID: Coptis23_contig00024216
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00024216
(700 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA98183.1| RAB11G [Lotus japonicus] 189 5e-74
ref|XP_002527386.1| protein with unknown function [Ricinus commu... 185 1e-73
ref|XP_002264559.2| PREDICTED: ras-related protein RABA5c-like i... 182 2e-73
emb|CAN66526.1| hypothetical protein VITISV_043978 [Vitis vinifera] 182 2e-73
ref|XP_002301639.1| predicted protein [Populus trichocarpa] gi|2... 184 3e-73
>emb|CAA98183.1| RAB11G [Lotus japonicus]
Length = 219
Score = 189 bits (479), Expect(2) = 5e-74
Identities = 101/153 (66%), Positives = 112/153 (73%)
Frame = -3
Query: 461 DTAGQERFRAVTSAYYRGAIGAFIVYDITRRTTFDSVARWLDELNTHSDTTIARMLVGNK 282
DTAGQERFRAVTSAYYRGA+GA IVYDITRRTTFDSV+RWLDEL TH DTT+A MLVGNK
Sbjct: 68 DTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSVSRWLDELKTHCDTTVAMMLVGNK 127
Query: 281 LDLENIRAVSVEEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNVRTAFEM 102
DLENIRAVS+EEGK TNVRTAFEM
Sbjct: 128 CDLENIRAVSIEEGK------------------SLAEAQGLFFMETSALDSTNVRTAFEM 169
Query: 101 VIKDIYNNVSRKVLNSDSYKADVSLNRVSLVNN 3
VI++IYNNVSRKVLNSD+YKA++S++RVSLVNN
Sbjct: 170 VIREIYNNVSRKVLNSDTYKAELSVDRVSLVNN 202
Score = 115 bits (288), Expect(2) = 5e-74
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = -1
Query: 700 GEEYLFKVVIIGDSAVGKSNLLSRYARNEFNMNSKATIGVEFQTQSMEIDGKEVKAQIWD 521
GEEYLFK+VIIGDSAVGKSNLLSRYARNEFNM+SKATIGVEFQTQS+EID KEVKAQIWD
Sbjct: 9 GEEYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQSLEIDSKEVKAQIWD 68
>ref|XP_002527386.1| protein with unknown function [Ricinus communis]
gi|223533238|gb|EEF34993.1| protein with unknown
function [Ricinus communis]
Length = 218
Score = 185 bits (469), Expect(2) = 1e-73
Identities = 99/153 (64%), Positives = 111/153 (72%)
Frame = -3
Query: 461 DTAGQERFRAVTSAYYRGAIGAFIVYDITRRTTFDSVARWLDELNTHSDTTIARMLVGNK 282
DTAGQERFRAVTSAYYRGA+GA IVYDI+RRTTFDSV RWLDEL THSDTT+ARMLVGNK
Sbjct: 67 DTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARMLVGNK 126
Query: 281 LDLENIRAVSVEEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNVRTAFEM 102
DLENIR V+VEEGK TNV+ AFE+
Sbjct: 127 CDLENIRDVTVEEGK------------------SLAEAEGLFFMETSALDSTNVKKAFEI 168
Query: 101 VIKDIYNNVSRKVLNSDSYKADVSLNRVSLVNN 3
VI++IYNNVSRKVLNSD+YKA++SLNRV+LVNN
Sbjct: 169 VIREIYNNVSRKVLNSDTYKAELSLNRVTLVNN 201
Score = 117 bits (294), Expect(2) = 1e-73
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = -1
Query: 700 GEEYLFKVVIIGDSAVGKSNLLSRYARNEFNMNSKATIGVEFQTQSMEIDGKEVKAQIWD 521
GEEYLFK+VIIGDSAVGKSNLLSRYARNEFN++SKATIGVEFQTQSMEIDGKEVKAQIWD
Sbjct: 8 GEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWD 67
>ref|XP_002264559.2| PREDICTED: ras-related protein RABA5c-like isoform 2 [Vitis
vinifera]
Length = 302
Score = 182 bits (463), Expect(2) = 2e-73
Identities = 97/153 (63%), Positives = 112/153 (73%)
Frame = -3
Query: 461 DTAGQERFRAVTSAYYRGAIGAFIVYDITRRTTFDSVARWLDELNTHSDTTIARMLVGNK 282
DTAGQERFRAVTSAYYRGA+GA +VYDI+RR+TFDSVARWLDEL THS+TT+ARMLVGNK
Sbjct: 152 DTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGNK 211
Query: 281 LDLENIRAVSVEEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNVRTAFEM 102
DLENIR VSVEEGK TNV+ AFE+
Sbjct: 212 SDLENIRDVSVEEGK------------------SLAEAEGLFFIETSALDSTNVKKAFEI 253
Query: 101 VIKDIYNNVSRKVLNSDSYKADVSLNRVSLVNN 3
VI++IYNN+SRKVLNSDSYKA++S+NRVSLV+N
Sbjct: 254 VIREIYNNISRKVLNSDSYKAELSVNRVSLVSN 286
Score = 119 bits (299), Expect(2) = 2e-73
Identities = 59/60 (98%), Positives = 60/60 (100%)
Frame = -1
Query: 700 GEEYLFKVVIIGDSAVGKSNLLSRYARNEFNMNSKATIGVEFQTQSMEIDGKEVKAQIWD 521
GEEYLFKVVIIGDSAVGKSNLLSRYARNEFN+NSKATIGVEFQTQSMEIDGKEVKAQIWD
Sbjct: 93 GEEYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQIWD 152
>emb|CAN66526.1| hypothetical protein VITISV_043978 [Vitis vinifera]
Length = 215
Score = 182 bits (463), Expect(2) = 2e-73
Identities = 97/153 (63%), Positives = 112/153 (73%)
Frame = -3
Query: 461 DTAGQERFRAVTSAYYRGAIGAFIVYDITRRTTFDSVARWLDELNTHSDTTIARMLVGNK 282
DTAGQERFRAVTSAYYRGA+GA +VYDI+RR+TFDSVARWLDEL THS+TT+ARMLVGNK
Sbjct: 65 DTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGNK 124
Query: 281 LDLENIRAVSVEEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNVRTAFEM 102
DLENIR VSVEEGK TNV+ AFE+
Sbjct: 125 SDLENIRDVSVEEGK------------------SLAEAEGLFFIETSALDSTNVKKAFEI 166
Query: 101 VIKDIYNNVSRKVLNSDSYKADVSLNRVSLVNN 3
VI++IYNN+SRKVLNSDSYKA++S+NRVSLV+N
Sbjct: 167 VIREIYNNISRKVLNSDSYKAELSVNRVSLVSN 199
Score = 119 bits (299), Expect(2) = 2e-73
Identities = 59/60 (98%), Positives = 60/60 (100%)
Frame = -1
Query: 700 GEEYLFKVVIIGDSAVGKSNLLSRYARNEFNMNSKATIGVEFQTQSMEIDGKEVKAQIWD 521
GEEYLFKVVIIGDSAVGKSNLLSRYARNEFN+NSKATIGVEFQTQSMEIDGKEVKAQIWD
Sbjct: 6 GEEYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQIWD 65
>ref|XP_002301639.1| predicted protein [Populus trichocarpa] gi|222843365|gb|EEE80912.1|
predicted protein [Populus trichocarpa]
Length = 217
Score = 184 bits (466), Expect(2) = 3e-73
Identities = 99/153 (64%), Positives = 110/153 (71%)
Frame = -3
Query: 461 DTAGQERFRAVTSAYYRGAIGAFIVYDITRRTTFDSVARWLDELNTHSDTTIARMLVGNK 282
DTAGQERFRAVTSAYYRGA+GA IVYDI+RRTTFDSV RWLDEL THSDTT+A MLVGNK
Sbjct: 67 DTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMMLVGNK 126
Query: 281 LDLENIRAVSVEEGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNVRTAFEM 102
DLENIR VSVEEGK TNV+ AFE+
Sbjct: 127 CDLENIRDVSVEEGK------------------SLAEAEGLFFMETSALDSTNVKKAFEI 168
Query: 101 VIKDIYNNVSRKVLNSDSYKADVSLNRVSLVNN 3
VI++IYNNVSRKVLNSD+YKA++SLNRV+LVNN
Sbjct: 169 VIREIYNNVSRKVLNSDTYKAELSLNRVTLVNN 201
Score = 117 bits (294), Expect(2) = 3e-73
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = -1
Query: 700 GEEYLFKVVIIGDSAVGKSNLLSRYARNEFNMNSKATIGVEFQTQSMEIDGKEVKAQIWD 521
GEEYLFK+VIIGDSAVGKSNLLSRYARNEFN++SKATIGVEFQTQSMEIDGKEVKAQIWD
Sbjct: 8 GEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWD 67