BLASTX nr result

ID: Coptis23_contig00024214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024214
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597432.1| hypothetical protein MTR_2g097990 [Medicago ...   140   2e-31
ref|XP_003613311.1| hypothetical protein MTR_5g035160 [Medicago ...   133   2e-29
ref|XP_003610646.1| hypothetical protein MTR_5g005410 [Medicago ...   133   3e-29
ref|XP_003630318.1| Auxilin-like protein [Medicago truncatula] g...   126   2e-27
ref|XP_003630317.1| Auxilin-like protein [Medicago truncatula] g...   126   2e-27

>ref|XP_003597432.1| hypothetical protein MTR_2g097990 [Medicago truncatula]
           gi|355486480|gb|AES67683.1| hypothetical protein
           MTR_2g097990 [Medicago truncatula]
          Length = 289

 Score =  140 bits (353), Expect = 2e-31
 Identities = 78/178 (43%), Positives = 96/178 (53%)
 Frame = +2

Query: 56  LDEILDVASSALSLCLPDFDLSSMAVNATVPSKPQKVLAEAFYGKIVAGLEREFVLSARQ 235
           +D   D A   L   +P FD+S      TVP K Q +LA A + K V  +E +F ++  Q
Sbjct: 1   MDSDFDNAFDGLHSTIPYFDVSIFTNKDTVPPKTQHILASALFSKSVQDMEVKFDMTTGQ 60

Query: 236 KAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRSILRYRLMIPLYSDGGLC 415
           KA+                                    EYR+ILRYRLMIPL+    +C
Sbjct: 61  KAIFECLQAAHAQNFLLAIPIDGLGQHMSPV--------EYRTILRYRLMIPLFPIDEVC 112

Query: 416 PVCKKSRLDAFGDHAAHCRHFPGFKYRHDHVRDILCDAFWRAGVQVKKEAPVNFLTDP 589
            VC+KS LD FG+HA HC+  PGFKYR D VRD+L D F RAG+ VKKEAPVNFLTDP
Sbjct: 113 SVCRKSCLDTFGEHAIHCKELPGFKYRRDFVRDVLFDIFIRAGISVKKEAPVNFLTDP 170


>ref|XP_003613311.1| hypothetical protein MTR_5g035160 [Medicago truncatula]
           gi|355514646|gb|AES96269.1| hypothetical protein
           MTR_5g035160 [Medicago truncatula]
          Length = 344

 Score =  133 bits (335), Expect = 2e-29
 Identities = 81/196 (41%), Positives = 102/196 (52%), Gaps = 1/196 (0%)
 Frame = +2

Query: 5   QTSELQNHILRSCGPVPLDEILDVASSALSLCLPDFDLSSMAVNATVPSKPQKVLAEAFY 184
           Q+  LQ+HILR      +D   D     L   + DFD+SS     TVP K + VL  A +
Sbjct: 6   QSWMLQDHILRDNEIYGMDSDFDNVLDGLRGTILDFDVSSFTSKDTVPPKAEHVLTSALF 65

Query: 185 GKIVAGLEREFVLSARQKAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRS 364
            K V  +E +F ++ RQKA+                                    EYR+
Sbjct: 66  SKSVQDMEVKFDMTTRQKAILGCLQAAHARDFLLAIPIDGLGQHMSPV--------EYRT 117

Query: 365 ILRYRLMIPLYSDGGLCPVCKKSRLDAFGDHAAHCRHFPGFKYRHDHVRDILCDAFWRAG 544
           ILRYR MIPL+S   +C V +K+ LD FG+H  HC+  PGFKY+HD VRD+L D F  AG
Sbjct: 118 ILRYRRMIPLFSIDEVCHVYRKACLDTFGEHVVHCKELPGFKYKHDFVRDVLFDIFRWAG 177

Query: 545 VQ-VKKEAPVNFLTDP 589
           V  VKKEAPVNF TDP
Sbjct: 178 VSAVKKEAPVNFPTDP 193


>ref|XP_003610646.1| hypothetical protein MTR_5g005410 [Medicago truncatula]
           gi|355511981|gb|AES93604.1| hypothetical protein
           MTR_5g005410 [Medicago truncatula]
          Length = 389

 Score =  133 bits (334), Expect = 3e-29
 Identities = 80/195 (41%), Positives = 100/195 (51%)
 Frame = +2

Query: 5   QTSELQNHILRSCGPVPLDEILDVASSALSLCLPDFDLSSMAVNATVPSKPQKVLAEAFY 184
           Q+  LQ HILR  G   +D   D A   L   +PDFD+SS     TVP K Q V     +
Sbjct: 185 QSWVLQYHILRDSGICGIDLDFDNALDGLHGTIPDFDVSSFTCKDTVPPKAQHV-----F 239

Query: 185 GKIVAGLEREFVLSARQKAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRS 364
           G + A   ++F+L+     +                                    EYR+
Sbjct: 240 GCLQAPHAQDFLLAIPIDGLGQHMSPI-----------------------------EYRT 270

Query: 365 ILRYRLMIPLYSDGGLCPVCKKSRLDAFGDHAAHCRHFPGFKYRHDHVRDILCDAFWRAG 544
           ILRYRLMIPL+    +C VC+K+ LD FG+H  HC+  P FKYRHD VRD+L D F RAG
Sbjct: 271 ILRYRLMIPLFPIDEVCTVCRKACLDTFGEHVVHCKELPNFKYRHDFVRDVLFDIFRRAG 330

Query: 545 VQVKKEAPVNFLTDP 589
           + VKKEAPVNFLT P
Sbjct: 331 ISVKKEAPVNFLTGP 345


>ref|XP_003630318.1| Auxilin-like protein [Medicago truncatula]
           gi|355524340|gb|AET04794.1| Auxilin-like protein
           [Medicago truncatula]
          Length = 949

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/79 (72%), Positives = 65/79 (82%)
 Frame = +2

Query: 353 EYRSILRYRLMIPLYSDGGLCPVCKKSRLDAFGDHAAHCRHFPGFKYRHDHVRDILCDAF 532
           EYR+ILRYRLMIPL+    +CPVC+K+ LD FG+HA HC+  PGFKYRHD VRD+L D F
Sbjct: 70  EYRTILRYRLMIPLFPIDEVCPVCRKACLDTFGEHAVHCKELPGFKYRHDFVRDVLFDIF 129

Query: 533 WRAGVQVKKEAPVNFLTDP 589
            RAGV VKKEAPVNFLTDP
Sbjct: 130 RRAGVSVKKEAPVNFLTDP 148


>ref|XP_003630317.1| Auxilin-like protein [Medicago truncatula]
           gi|355524339|gb|AET04793.1| Auxilin-like protein
           [Medicago truncatula]
          Length = 1017

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/79 (72%), Positives = 65/79 (82%)
 Frame = +2

Query: 353 EYRSILRYRLMIPLYSDGGLCPVCKKSRLDAFGDHAAHCRHFPGFKYRHDHVRDILCDAF 532
           EYR+ILRYRLMIPL+    +CPVC+K+ LD FG+HA HC+  PGFKYRHD VRD+L D F
Sbjct: 70  EYRTILRYRLMIPLFPIDEVCPVCRKACLDTFGEHAVHCKELPGFKYRHDFVRDVLFDIF 129

Query: 533 WRAGVQVKKEAPVNFLTDP 589
            RAGV VKKEAPVNFLTDP
Sbjct: 130 RRAGVSVKKEAPVNFLTDP 148


Top