BLASTX nr result

ID: Coptis23_contig00024206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024206
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628022.1| hypothetical protein MTR_8g041530 [Medicago ...    57   3e-06
ref|XP_003628018.1| hypothetical protein MTR_8g041480 [Medicago ...    57   3e-06

>ref|XP_003628022.1| hypothetical protein MTR_8g041530 [Medicago truncatula]
           gi|355522044|gb|AET02498.1| hypothetical protein
           MTR_8g041530 [Medicago truncatula]
          Length = 469

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/100 (36%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
 Frame = +1

Query: 106 ESITHLFLHCSYSLEVWSIMVQ--PFGLFFPXXXXXXXXXXXXXHWPKMRGNGFIAKLWK 279
           ES  HLFLHC    +VW  +++   F L  P              W K    G     W 
Sbjct: 103 ESTLHLFLHCEIIDKVWREVMRWLNFNLTTPPNLFIHICCWTREVWSKKLRRG----AW- 157

Query: 280 LTPHAVLWVLWKIRNNRVFRQKIIPPTRACIVAKGLVWHW 399
           L  HAV+WV+W  RN+R+F  KII         K LVW W
Sbjct: 158 LIWHAVIWVVWLARNDRIFNNKIIEVEEMVDKIKVLVWQW 197


>ref|XP_003628018.1| hypothetical protein MTR_8g041480 [Medicago truncatula]
           gi|355522040|gb|AET02494.1| hypothetical protein
           MTR_8g041480 [Medicago truncatula]
          Length = 491

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/100 (36%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
 Frame = +1

Query: 106 ESITHLFLHCSYSLEVWSIMVQ--PFGLFFPXXXXXXXXXXXXXHWPKMRGNGFIAKLWK 279
           ES  HLFLHC    +VW  +++   F L  P              W K    G     W 
Sbjct: 132 ESTLHLFLHCEIIDKVWREVMRWLNFNLTTPPNLFIHICCWTREVWSKKLRRG----AW- 186

Query: 280 LTPHAVLWVLWKIRNNRVFRQKIIPPTRACIVAKGLVWHW 399
           L  HAV+WV+W  RN+R+F  KII         K LVW W
Sbjct: 187 LIWHAVIWVVWLARNDRIFNNKIIEVEEMVDKIKVLVWQW 226


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