BLASTX nr result

ID: Coptis23_contig00024191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024191
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263869.1| PREDICTED: lamin-like protein [Vitis vinifer...   219   4e-55
ref|NP_001237022.1| uncharacterized protein LOC100305555 precurs...   218   9e-55
emb|CAN70727.1| hypothetical protein VITISV_028080 [Vitis vinifera]   218   9e-55
ref|XP_004160339.1| PREDICTED: lamin-like protein-like [Cucumis ...   210   2e-52
ref|XP_004137655.1| PREDICTED: lamin-like protein-like [Cucumis ...   210   3e-52

>ref|XP_002263869.1| PREDICTED: lamin-like protein [Vitis vinifera]
           gi|298204685|emb|CBI25183.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  219 bits (558), Expect = 4e-55
 Identities = 102/148 (68%), Positives = 116/148 (78%)
 Frame = -1

Query: 621 VCATDHIVGANKGWNPGINYTLWANNHTFYIGDLISFRYAKNQYNVFRVNETGYDNCTTE 442
           V ATDHIVGAN+GWNPGINYTLWANNHTFY+ DLISFRY KNQYNVF VN+TGYDNCTT+
Sbjct: 18  VTATDHIVGANRGWNPGINYTLWANNHTFYVNDLISFRYQKNQYNVFEVNQTGYDNCTTD 77

Query: 441 GATGNWTSGKDFIPLDEAKRYYFICGNGGCFSGMKVSVLVHSLPSPPTAAGVAGPRSDKS 262
            ATGNW+SGKDFI LD+AKRYYFICGNGGCFSGMKVSVLVH LP+PP+A+  A   S  +
Sbjct: 78  SATGNWSSGKDFILLDKAKRYYFICGNGGCFSGMKVSVLVHPLPTPPSASTAAAEISKPN 137

Query: 261 VAATRDVGFGXXXXXXXXSIMWV*SCWI 178
            AA R    G         ++W+   W+
Sbjct: 138 SAAARAPRSG--SMAFVGLVLWIGWIWL 163


>ref|NP_001237022.1| uncharacterized protein LOC100305555 precursor [Glycine max]
           gi|255625899|gb|ACU13294.1| unknown [Glycine max]
          Length = 170

 Score =  218 bits (555), Expect = 9e-55
 Identities = 98/122 (80%), Positives = 107/122 (87%)
 Frame = -1

Query: 621 VCATDHIVGANKGWNPGINYTLWANNHTFYIGDLISFRYAKNQYNVFRVNETGYDNCTTE 442
           V ATDHIVGAN+GWNPG NYTLWANNHTFY+GDLISFRY KNQYNVF VN+TGYDNCTTE
Sbjct: 21  VTATDHIVGANRGWNPGFNYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTTE 80

Query: 441 GATGNWTSGKDFIPLDEAKRYYFICGNGGCFSGMKVSVLVHSLPSPPTAAGVAGPRSDKS 262
           GA GNW+SGKDFIPL++AKRYYFICGNG CFSGMKVSV+VH LP PPT+A  A   S KS
Sbjct: 81  GAVGNWSSGKDFIPLNKAKRYYFICGNGQCFSGMKVSVVVHPLPPPPTSAVAAQHSSPKS 140

Query: 261 VA 256
            +
Sbjct: 141 AS 142


>emb|CAN70727.1| hypothetical protein VITISV_028080 [Vitis vinifera]
          Length = 168

 Score =  218 bits (555), Expect = 9e-55
 Identities = 101/148 (68%), Positives = 116/148 (78%)
 Frame = -1

Query: 621 VCATDHIVGANKGWNPGINYTLWANNHTFYIGDLISFRYAKNQYNVFRVNETGYDNCTTE 442
           V ATDHIVGAN+GWNPG+NYTLWANNHTFY+ DLISFRY KNQYNVF VN+TGYDNCTT+
Sbjct: 18  VTATDHIVGANRGWNPGMNYTLWANNHTFYVNDLISFRYQKNQYNVFEVNQTGYDNCTTD 77

Query: 441 GATGNWTSGKDFIPLDEAKRYYFICGNGGCFSGMKVSVLVHSLPSPPTAAGVAGPRSDKS 262
            ATGNW+SGKDFI LD+AKRYYFICGNGGCFSGMKVSVLVH LP+PP+A+  A   S  +
Sbjct: 78  SATGNWSSGKDFILLDKAKRYYFICGNGGCFSGMKVSVLVHPLPTPPSASTAAAEISKPN 137

Query: 261 VAATRDVGFGXXXXXXXXSIMWV*SCWI 178
            AA R    G         ++W+   W+
Sbjct: 138 SAAARAPRSG--SMAFVGLVLWIGWIWL 163


>ref|XP_004160339.1| PREDICTED: lamin-like protein-like [Cucumis sativus]
          Length = 171

 Score =  210 bits (535), Expect = 2e-52
 Identities = 91/109 (83%), Positives = 102/109 (93%)
 Frame = -1

Query: 621 VCATDHIVGANKGWNPGINYTLWANNHTFYIGDLISFRYAKNQYNVFRVNETGYDNCTTE 442
           V ATDHIVGAN+GWNPGINYTLWANNHTFY+GDLISFRY KNQYNVF VN+TGYDNCT E
Sbjct: 23  VSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTIE 82

Query: 441 GATGNWTSGKDFIPLDEAKRYYFICGNGGCFSGMKVSVLVHSLPSPPTA 295
           GA+GNW+SGKDFIPLD+A+RYYFICGNG CF+GMKV+VLVH LP PP++
Sbjct: 83  GASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTVLVHPLPPPPSS 131


>ref|XP_004137655.1| PREDICTED: lamin-like protein-like [Cucumis sativus]
          Length = 171

 Score =  210 bits (534), Expect = 3e-52
 Identities = 90/109 (82%), Positives = 102/109 (93%)
 Frame = -1

Query: 621 VCATDHIVGANKGWNPGINYTLWANNHTFYIGDLISFRYAKNQYNVFRVNETGYDNCTTE 442
           V ATDHIVGAN+GWNPGINYTLWANNHTFY+GDLISFRY KNQYNVF VN+TGYDNCT E
Sbjct: 23  VSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTIE 82

Query: 441 GATGNWTSGKDFIPLDEAKRYYFICGNGGCFSGMKVSVLVHSLPSPPTA 295
           GA+GNW+SGKDFIPLD+A+RYYFICGNG CF+GMKV++LVH LP PP++
Sbjct: 83  GASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTILVHPLPPPPSS 131


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