BLASTX nr result

ID: Coptis23_contig00024184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024184
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612537.1| Receptor kinase-like protein [Medicago trunc...   132   4e-29
ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_002268823.1| PREDICTED: probable LRR receptor-like serine...   129   2e-28
emb|CAN63094.1| hypothetical protein VITISV_020143 [Vitis vinifera]   129   2e-28
ref|XP_003612519.1| Kinase-like protein [Medicago truncatula] gi...   128   4e-28

>ref|XP_003612537.1| Receptor kinase-like protein [Medicago truncatula]
           gi|355513872|gb|AES95495.1| Receptor kinase-like protein
           [Medicago truncatula]
          Length = 1121

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/137 (45%), Positives = 90/137 (65%), Gaps = 9/137 (6%)
 Frame = +2

Query: 5   NETDHLSLIAFKEEITSDPFGLLDSWNNSLHFCMWNGVSCS--------LKLGSYKLEGK 160
           N++DHL+L+ FKE I+SDP+  L+SWN+S+HFC W G++C+        L LGSY+L+G+
Sbjct: 9   NQSDHLALLKFKESISSDPYKALESWNSSIHFCKWYGITCNPMHQRVIELDLGSYRLQGR 68

Query: 161 LSPVVGNLSFLRVLNLSNNLFQGEVPQEINRLYRLENISLANNSFQGNLPT-XXXXXXXX 337
           LSP VGNL+FL  L L NN F GE+PQE+ +L +L+ + L NNSF G +PT         
Sbjct: 69  LSPHVGNLTFLIKLKLENNTFYGEIPQELGQLLQLQQLFLTNNSFAGEIPTNLTYCSNLK 128

Query: 338 XXXXXXXXXIGRVPVEL 388
                    IG++P+E+
Sbjct: 129 VITLAGNKLIGKIPIEI 145


>ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|222850885|gb|EEE88432.1|
           predicted protein [Populus trichocarpa]
          Length = 1032

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/110 (56%), Positives = 78/110 (70%), Gaps = 8/110 (7%)
 Frame = +2

Query: 5   NETDHLSLIAFKEEITSDPFGLLDSWNNSLHFCMWNGVSCS--------LKLGSYKLEGK 160
           NETD LSL+AFK++I +DP G L SWN+S HFC W+GV+C         L L S KL G 
Sbjct: 31  NETDRLSLLAFKDQIEADPLGTLSSWNDSSHFCEWSGVTCGRRHQRVVELDLNSCKLVGS 90

Query: 161 LSPVVGNLSFLRVLNLSNNLFQGEVPQEINRLYRLENISLANNSFQGNLP 310
           LSP +GNLSFLR+LNL+NN F   +PQEI RL+RL+ + L NN+F G +P
Sbjct: 91  LSPHIGNLSFLRILNLNNNSFSHTIPQEIGRLFRLQKLLLRNNTFTGEIP 140


>ref|XP_002268823.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570 [Vitis vinifera]
          Length = 1009

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/112 (57%), Positives = 79/112 (70%), Gaps = 9/112 (8%)
 Frame = +2

Query: 5   NETDHLSLIAFKEEITSDPFGLLDSWNNSLHFCMWNGVSCS---------LKLGSYKLEG 157
           NETD L+LIAFK+ IT DP G+L SWN+SLHFC W+GV CS         L L SY L G
Sbjct: 30  NETDRLALIAFKDGITQDPLGMLSSWNDSLHFCRWSGVYCSRRHVHRVTKLNLFSYGLVG 89

Query: 158 KLSPVVGNLSFLRVLNLSNNLFQGEVPQEINRLYRLENISLANNSFQGNLPT 313
            LSP +GNL+FLR + L NN F G+VP EI  L+RL+ + L+NNSF+G +PT
Sbjct: 90  SLSPHIGNLTFLRTIVLQNNSFHGKVPSEIGGLFRLQVLVLSNNSFEGKVPT 141


>emb|CAN63094.1| hypothetical protein VITISV_020143 [Vitis vinifera]
          Length = 1009

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/112 (57%), Positives = 79/112 (70%), Gaps = 9/112 (8%)
 Frame = +2

Query: 5   NETDHLSLIAFKEEITSDPFGLLDSWNNSLHFCMWNGVSCS---------LKLGSYKLEG 157
           NETD L+LIAFK+ IT DP G+L SWN+SLHFC W+GV CS         L L SY L G
Sbjct: 30  NETDRLALIAFKDGITQDPLGMLSSWNDSLHFCRWSGVYCSRRHVHRVTKLNLFSYGLVG 89

Query: 158 KLSPVVGNLSFLRVLNLSNNLFQGEVPQEINRLYRLENISLANNSFQGNLPT 313
            LSP +GNL+FLR + L NN F G+VP EI  L+RL+ + L+NNSF+G +PT
Sbjct: 90  SLSPHIGNLTFLRTIVLQNNSFHGKVPSEIGGLFRLQVLVLSNNSFEGKVPT 141


>ref|XP_003612519.1| Kinase-like protein [Medicago truncatula]
           gi|355513854|gb|AES95477.1| Kinase-like protein
           [Medicago truncatula]
          Length = 1164

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/110 (53%), Positives = 76/110 (69%), Gaps = 8/110 (7%)
 Frame = +2

Query: 5   NETDHLSLIAFKEEITSDPFGLLDSWNNSLHFCMWNGVSC--------SLKLGSYKLEGK 160
           N+TDHL+L+ FK+ I+SDP+G+LDSWN+S HFC WNG+ C        +LKL  YKL G 
Sbjct: 29  NQTDHLALLQFKQLISSDPYGILDSWNSSTHFCKWNGIICGPKHQRVTNLKLQGYKLHGS 88

Query: 161 LSPVVGNLSFLRVLNLSNNLFQGEVPQEINRLYRLENISLANNSFQGNLP 310
           +SP +GNLS +R LNL NN F G +PQE+ RL +L  + L NNS  G  P
Sbjct: 89  ISPYIGNLSQMRYLNLGNNSFNGNIPQELGRLSKLRYLLLLNNSLVGEFP 138


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