BLASTX nr result

ID: Coptis23_contig00024174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024174
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19060.3| unnamed protein product [Vitis vinifera]              118   6e-25
ref|XP_002284405.1| PREDICTED: uncharacterized protein LOC100254...   118   6e-25
emb|CAN68379.1| hypothetical protein VITISV_018905 [Vitis vinifera]   118   6e-25
ref|XP_004140387.1| PREDICTED: UPF0695 membrane protein YPL279C-...   110   9e-23
ref|NP_565956.1| camphor resistance CrcB-like protein [Arabidops...   110   9e-23

>emb|CBI19060.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/82 (70%), Positives = 65/82 (79%)
 Frame = -1

Query: 451 VMAALATMKKVVNSDKFETIATGIQFGLLGCLSTVSTFIAEFHDMCMSEHPWRACVYASI 272
           VMA L+T+KK V+S   +TI TGI+FG LGCLSTVSTFIAEF+ M  S HPWRA  YA +
Sbjct: 446 VMAGLSTLKKAVDSKNCDTIVTGIEFGFLGCLSTVSTFIAEFNAMRESHHPWRAYAYAML 505

Query: 271 TILRSFILGTLIYSVPVWTKGY 206
           TI  SF LGTLIYSVPVWTKGY
Sbjct: 506 TIFLSFGLGTLIYSVPVWTKGY 527


>ref|XP_002284405.1| PREDICTED: uncharacterized protein LOC100254107 [Vitis vinifera]
          Length = 510

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/82 (70%), Positives = 65/82 (79%)
 Frame = -1

Query: 451 VMAALATMKKVVNSDKFETIATGIQFGLLGCLSTVSTFIAEFHDMCMSEHPWRACVYASI 272
           VMA L+T+KK V+S   +TI TGI+FG LGCLSTVSTFIAEF+ M  S HPWRA  YA +
Sbjct: 428 VMAGLSTLKKAVDSKNCDTIVTGIEFGFLGCLSTVSTFIAEFNAMRESHHPWRAYAYAML 487

Query: 271 TILRSFILGTLIYSVPVWTKGY 206
           TI  SF LGTLIYSVPVWTKGY
Sbjct: 488 TIFLSFGLGTLIYSVPVWTKGY 509


>emb|CAN68379.1| hypothetical protein VITISV_018905 [Vitis vinifera]
          Length = 399

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/82 (70%), Positives = 65/82 (79%)
 Frame = -1

Query: 451 VMAALATMKKVVNSDKFETIATGIQFGLLGCLSTVSTFIAEFHDMCMSEHPWRACVYASI 272
           VMA L+T+KK V+S   +TI TGI+FG LGCLSTVSTFIAEF+ M  S HPWRA  YA +
Sbjct: 317 VMAGLSTLKKAVDSKNCDTIVTGIEFGFLGCLSTVSTFIAEFNAMRESHHPWRAYAYAML 376

Query: 271 TILRSFILGTLIYSVPVWTKGY 206
           TI  SF LGTLIYSVPVWTKGY
Sbjct: 377 TIFLSFGLGTLIYSVPVWTKGY 398


>ref|XP_004140387.1| PREDICTED: UPF0695 membrane protein YPL279C-like [Cucumis sativus]
           gi|449502484|ref|XP_004161653.1| PREDICTED: UPF0695
           membrane protein YPL279C-like [Cucumis sativus]
          Length = 596

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/81 (65%), Positives = 66/81 (81%)
 Frame = -1

Query: 451 VMAALATMKKVVNSDKFETIATGIQFGLLGCLSTVSTFIAEFHDMCMSEHPWRACVYASI 272
           VMAALAT+KK V +++ ET+A+G+Q GLLGCLSTVSTF+ EF+ M +SE PWRA VYA++
Sbjct: 513 VMAALATVKKAVKTERVETVASGLQLGLLGCLSTVSTFVVEFNAMRLSEEPWRAYVYATL 572

Query: 271 TILRSFILGTLIYSVPVWTKG 209
           T+  SF  G LIYSVPVW KG
Sbjct: 573 TMGISFGFGILIYSVPVWVKG 593


>ref|NP_565956.1| camphor resistance CrcB-like protein [Arabidopsis thaliana]
           gi|238479528|ref|NP_001154568.1| camphor resistance
           CrcB-like protein [Arabidopsis thaliana]
           gi|20196897|gb|AAM14827.1| Expressed protein
           [Arabidopsis thaliana] gi|26453266|dbj|BAC43706.1|
           unknown protein [Arabidopsis thaliana]
           gi|330254925|gb|AEC10019.1| camphor resistance CrcB-like
           protein [Arabidopsis thaliana]
           gi|330254926|gb|AEC10020.1| camphor resistance CrcB-like
           protein [Arabidopsis thaliana]
          Length = 461

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/82 (65%), Positives = 66/82 (80%)
 Frame = -1

Query: 451 VMAALATMKKVVNSDKFETIATGIQFGLLGCLSTVSTFIAEFHDMCMSEHPWRACVYASI 272
           VMAALAT+KK VN+    T+A+ IQFGLLGCLSTVSTF+AEF+ M  S++PWRA  YAS 
Sbjct: 379 VMAALATLKKSVNTRTCNTVASSIQFGLLGCLSTVSTFMAEFNAMRESDYPWRAYAYASF 438

Query: 271 TILRSFILGTLIYSVPVWTKGY 206
           TI+ SF +GT+IYSVPVW  G+
Sbjct: 439 TIVVSFAIGTIIYSVPVWVIGF 460


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