BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024156
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]   102   3e-20
emb|CBI20261.3| unnamed protein product [Vitis vinifera]              102   4e-20
ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat...   102   4e-20
ref|XP_002532249.1| pentatricopeptide repeat-containing protein,...    96   4e-18
ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat...    89   4e-16

>emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
          Length = 546

 Score =  102 bits (255), Expect = 3e-20
 Identities = 46/94 (48%), Positives = 70/94 (74%)
 Frame = -3

Query: 282 KVQSILQVHMNNSVKEVEKALDRCGVVLNDEFVLELLKWHRSDWKSALRYFYWVSKGGRK 103
           +VQ++L+ + ++SV E+E AL +C + L D+ VL++LK HRSDW+ A  +F W S+ G +
Sbjct: 89  EVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGXE 148

Query: 102 KMYRPGSSVYNEMIDILGRMKRFMELGEVFDEMS 1
             Y PG  V+NE++DILGRM+RF E+ ++FDEMS
Sbjct: 149 SGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMS 182


>emb|CBI20261.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  102 bits (253), Expect = 4e-20
 Identities = 46/94 (48%), Positives = 70/94 (74%)
 Frame = -3

Query: 282 KVQSILQVHMNNSVKEVEKALDRCGVVLNDEFVLELLKWHRSDWKSALRYFYWVSKGGRK 103
           +VQ++L+ + ++SV E+E AL +C + L D+ VL++LK HRSDW+ A  +F W S+ G +
Sbjct: 89  EVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIE 148

Query: 102 KMYRPGSSVYNEMIDILGRMKRFMELGEVFDEMS 1
             Y PG  V+NE++DILGRM+RF E+ ++FDEMS
Sbjct: 149 SGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMS 182


>ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Vitis vinifera]
          Length = 546

 Score =  102 bits (253), Expect = 4e-20
 Identities = 46/94 (48%), Positives = 70/94 (74%)
 Frame = -3

Query: 282 KVQSILQVHMNNSVKEVEKALDRCGVVLNDEFVLELLKWHRSDWKSALRYFYWVSKGGRK 103
           +VQ++L+ + ++SV E+E AL +C + L D+ VL++LK HRSDW+ A  +F W S+ G +
Sbjct: 89  EVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIE 148

Query: 102 KMYRPGSSVYNEMIDILGRMKRFMELGEVFDEMS 1
             Y PG  V+NE++DILGRM+RF E+ ++FDEMS
Sbjct: 149 SGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMS 182


>ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528067|gb|EEF30143.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/94 (47%), Positives = 68/94 (72%)
 Frame = -3

Query: 282 KVQSILQVHMNNSVKEVEKALDRCGVVLNDEFVLELLKWHRSDWKSALRYFYWVSKGGRK 103
           KVQ++L+ + ++  +++E AL +C   + ++ +L++LK HRSDWK AL +F WVSKGG+ 
Sbjct: 51  KVQNVLKNYRDSPTRKIELALTQCNPTVTEDLILKVLKRHRSDWKPALIFFNWVSKGGKV 110

Query: 102 KMYRPGSSVYNEMIDILGRMKRFMELGEVFDEMS 1
            M   GS  YNE++DILG+M+RF EL +V D MS
Sbjct: 111 LM---GSGAYNEILDILGKMRRFDELSQVLDIMS 141


>ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Cucumis sativus]
           gi|449502917|ref|XP_004161779.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g15200-like [Cucumis sativus]
          Length = 532

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/94 (44%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
 Frame = -3

Query: 279 VQSILQVHMNNSVKEVEKALDRCGVVLNDEFVLELLKWHRSDWKSALRYFYWVSK-GGRK 103
           VQ++L    +  V+++E+AL  C +VL D+FVL++L+ HRSDW  A  +F WV K G  +
Sbjct: 95  VQNVLYFRRHKPVEDIERALSLCDLVLTDDFVLKVLRRHRSDWNPAFIFFNWVLKRGTNE 154

Query: 102 KMYRPGSSVYNEMIDILGRMKRFMELGEVFDEMS 1
           + + PGS +YNE++ ILG+ +RF E+ +V  EMS
Sbjct: 155 EKFTPGSVIYNEILVILGKFRRFEEVDKVLVEMS 188