BLASTX nr result

ID: Coptis23_contig00024155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024155
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323878.1| AP2/ERF domain-containing transcription fact...   124   1e-26
gb|ABQ63001.1| WIN1-like protein [Populus trichocarpa]                124   1e-26
ref|XP_004156209.1| PREDICTED: uncharacterized LOC101212956 [Cuc...   122   3e-26
ref|XP_004141579.1| PREDICTED: uncharacterized protein LOC101212...   122   3e-26
ref|XP_002530017.1| conserved hypothetical protein [Ricinus comm...   120   9e-26

>ref|XP_002323878.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222866880|gb|EEF04011.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 400

 Score =  124 bits (310), Expect = 1e-26
 Identities = 65/93 (69%), Positives = 68/93 (73%)
 Frame = -3

Query: 300 GARRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTXXXXXXXXXXXACMLRGSNT 121
           GARRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDT           AC+LRG+NT
Sbjct: 38  GARRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANT 97

Query: 120 RTNFWXXXXXXXXXXXXXSKISNLLLLRLKARN 22
           RTNFW             SKI+NLLL RLKARN
Sbjct: 98  RTNFWPCSPTSSTTPALPSKITNLLLQRLKARN 130


>gb|ABQ63001.1| WIN1-like protein [Populus trichocarpa]
          Length = 400

 Score =  124 bits (310), Expect = 1e-26
 Identities = 65/93 (69%), Positives = 68/93 (73%)
 Frame = -3

Query: 300 GARRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTXXXXXXXXXXXACMLRGSNT 121
           GARRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDT           AC+LRG+NT
Sbjct: 38  GARRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANT 97

Query: 120 RTNFWXXXXXXXXXXXXXSKISNLLLLRLKARN 22
           RTNFW             SKI+NLLL RLKARN
Sbjct: 98  RTNFWPCSPTSSTTPALPSKITNLLLQRLKARN 130


>ref|XP_004156209.1| PREDICTED: uncharacterized LOC101212956 [Cucumis sativus]
          Length = 374

 Score =  122 bits (306), Expect = 3e-26
 Identities = 64/93 (68%), Positives = 67/93 (72%)
 Frame = -3

Query: 300 GARRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTXXXXXXXXXXXACMLRGSNT 121
           GARRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDT           AC+LRGSNT
Sbjct: 41  GARRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGSNT 100

Query: 120 RTNFWXXXXXXXXXXXXXSKISNLLLLRLKARN 22
           RTNFW             SKI+NLL+ RL ARN
Sbjct: 101 RTNFWPCSPLSSSSPALPSKITNLLIQRLNARN 133


>ref|XP_004141579.1| PREDICTED: uncharacterized protein LOC101212956 [Cucumis sativus]
          Length = 340

 Score =  122 bits (306), Expect = 3e-26
 Identities = 64/93 (68%), Positives = 67/93 (72%)
 Frame = -3

Query: 300 GARRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTXXXXXXXXXXXACMLRGSNT 121
           GARRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDT           AC+LRGSNT
Sbjct: 41  GARRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGSNT 100

Query: 120 RTNFWXXXXXXXXXXXXXSKISNLLLLRLKARN 22
           RTNFW             SKI+NLL+ RL ARN
Sbjct: 101 RTNFWPCSPLSSSSPALPSKITNLLIQRLNARN 133


>ref|XP_002530017.1| conserved hypothetical protein [Ricinus communis]
           gi|223530496|gb|EEF32379.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 408

 Score =  120 bits (302), Expect = 9e-26
 Identities = 63/93 (67%), Positives = 67/93 (72%)
 Frame = -3

Query: 300 GARRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTXXXXXXXXXXXACMLRGSNT 121
           G RRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDT           AC+LRG+NT
Sbjct: 39  GVRRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANT 98

Query: 120 RTNFWXXXXXXXXXXXXXSKISNLLLLRLKARN 22
           RTNFW             SKI+NLLL RL+ARN
Sbjct: 99  RTNFWPCSPSSSTTPALPSKITNLLLQRLQARN 131


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