BLASTX nr result

ID: Coptis23_contig00024142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024142
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40352.3| unnamed protein product [Vitis vinifera]              183   1e-44
ref|XP_002302583.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
emb|CBI40353.3| unnamed protein product [Vitis vinifera]              156   1e-36
ref|XP_001758257.1| predicted protein [Physcomitrella patens sub...   129   2e-28
ref|XP_001771297.1| predicted protein [Physcomitrella patens sub...   125   5e-27

>emb|CBI40352.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  183 bits (465), Expect = 1e-44
 Identities = 87/106 (82%), Positives = 97/106 (91%)
 Frame = -3

Query: 319 EVYLVKWRGTEVAAKTIRSSIASNDRVKSTFMKEIALWQRLRHPNIVQFLGVLNHSGRSV 140
           EVYLVKWRGTEVAAKTIRSSIAS+ RVK+TF++E+ LWQ+LRHPNIVQFLGVL HS R +
Sbjct: 319 EVYLVKWRGTEVAAKTIRSSIASDPRVKNTFLRELGLWQKLRHPNIVQFLGVLKHSERLI 378

Query: 139 FLTEYLPNGSLYDILKRKGRLDLPTTVAFALDIARGMNYLHQHKPH 2
           FLTEYL NGSLYDIL++KGRLD P  VA+ALDIARGMNYLHQHKPH
Sbjct: 379 FLTEYLRNGSLYDILRKKGRLDPPVAVAYALDIARGMNYLHQHKPH 424


>ref|XP_002302583.1| predicted protein [Populus trichocarpa] gi|222844309|gb|EEE81856.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score =  170 bits (430), Expect = 1e-40
 Identities = 86/118 (72%), Positives = 96/118 (81%), Gaps = 13/118 (11%)
 Frame = -3

Query: 319 EVYLVKWRGTEVAAKTIRSSIASNDRVKSTFMKEIALWQRLRHPNIVQFLGVLNHSGRSV 140
           EVYLVKWRGTEVAAKTIRSSIAS+ RV++TF+KE+ LWQ+LRHPNIVQFLGVL HS R +
Sbjct: 187 EVYLVKWRGTEVAAKTIRSSIASDPRVRNTFLKELGLWQKLRHPNIVQFLGVLKHSDRLI 246

Query: 139 FLTEYLPN-------------GSLYDILKRKGRLDLPTTVAFALDIARGMNYLHQHKP 5
           FLTEYL +             GSLYDILKRKGRLD  T V++ALDIARGMNYLHQHKP
Sbjct: 247 FLTEYLRDVGYPIFNHDWTFLGSLYDILKRKGRLDQETAVSYALDIARGMNYLHQHKP 304


>emb|CBI40353.3| unnamed protein product [Vitis vinifera]
          Length = 304

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/106 (70%), Positives = 88/106 (83%)
 Frame = -3

Query: 319 EVYLVKWRGTEVAAKTIRSSIASNDRVKSTFMKEIALWQRLRHPNIVQFLGVLNHSGRSV 140
           EVYLV+WR TEVAA  I SSI+S+ RVK+TF++E+ LWQ+L HPNIVQFLG   HS R +
Sbjct: 139 EVYLVRWRETEVAANIIYSSISSDPRVKNTFLRELGLWQKLCHPNIVQFLGFTKHSDRLI 198

Query: 139 FLTEYLPNGSLYDILKRKGRLDLPTTVAFALDIARGMNYLHQHKPH 2
           F+TEYL NGSLYDIL +KGRLD P  VA+ALDIARGMN+LHQ KPH
Sbjct: 199 FVTEYLRNGSLYDILSKKGRLDPPVVVAYALDIARGMNHLHQLKPH 244


>ref|XP_001758257.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162690713|gb|EDQ77079.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 380

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/105 (58%), Positives = 78/105 (74%)
 Frame = -3

Query: 319 EVYLVKWRGTEVAAKTIRSSIASNDRVKSTFMKEIALWQRLRHPNIVQFLGVLNHSGRSV 140
           E+ +VKWRGT VAAKTI S + S+ ++   F+ E+AL  RLRHPNI+QFLG +  +   +
Sbjct: 132 EIKIVKWRGTVVAAKTILSHLTSDQKIVKEFVDELALLSRLRHPNIMQFLGAVTKTQPFI 191

Query: 139 FLTEYLPNGSLYDILKRKGRLDLPTTVAFALDIARGMNYLHQHKP 5
            +TEYLP G L+D L RKG+LD  T V FALDIA+GMNYLH+HKP
Sbjct: 192 IVTEYLPKGDLHDYLDRKGKLDALTAVKFALDIAKGMNYLHEHKP 236


>ref|XP_001771297.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162677386|gb|EDQ63857.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 425

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/105 (55%), Positives = 77/105 (73%)
 Frame = -3

Query: 319 EVYLVKWRGTEVAAKTIRSSIASNDRVKSTFMKEIALWQRLRHPNIVQFLGVLNHSGRSV 140
           E+ + KWRGT VAAK++ S + S+ ++   F+ E+AL  RLRHPN++QFLG ++ S   V
Sbjct: 130 EIKIFKWRGTAVAAKSLLSHLTSDQKIVKEFVDELALLSRLRHPNVMQFLGAVSKSQPFV 189

Query: 139 FLTEYLPNGSLYDILKRKGRLDLPTTVAFALDIARGMNYLHQHKP 5
            +TEYLP G L+D L R G+LD  T V FALDIA+GMNYLH+HKP
Sbjct: 190 IVTEYLPKGDLHDYLDRNGKLDALTAVKFALDIAKGMNYLHKHKP 234


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