BLASTX nr result

ID: Coptis23_contig00024141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024141
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331906.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29
ref|XP_003633812.1| PREDICTED: probable peptide/nitrate transpor...   129   3e-28
emb|CBI34989.3| unnamed protein product [Vitis vinifera]              129   3e-28
ref|XP_002305027.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_002517413.1| amino acid permease, putative [Ricinus commu...   127   7e-28

>ref|XP_002331906.1| predicted protein [Populus trichocarpa] gi|222874578|gb|EEF11709.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  130 bits (328), Expect = 9e-29
 Identities = 67/84 (79%), Positives = 76/84 (90%)
 Frame = -2

Query: 253 KGLGKSCILLIVVAGVERFAFKGVASNLVTYLTEVVKMSNSSAAKTVNSWCGVSFLLPLL 74
           KGL KSC LLIV+AG+ERFAFKGVASNLVTYLT+VVKMSNS+AAKTVN+WCG + +LPLL
Sbjct: 8   KGLNKSCFLLIVIAGMERFAFKGVASNLVTYLTDVVKMSNSAAAKTVNNWCGFTSMLPLL 67

Query: 73  GAFLADSFLDRYSTILASSFLYVV 2
            A LADS+ DRYSTIL SSF+YVV
Sbjct: 68  VASLADSW-DRYSTILTSSFIYVV 90


>ref|XP_003633812.1| PREDICTED: probable peptide/nitrate transporter At5g14940-like
           [Vitis vinifera]
          Length = 533

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/84 (77%), Positives = 75/84 (89%)
 Frame = -2

Query: 253 KGLGKSCILLIVVAGVERFAFKGVASNLVTYLTEVVKMSNSSAAKTVNSWCGVSFLLPLL 74
           +GL K CILLIVVAG+ERFAFKGV SNLVTYLT+VVKMSNS+AAKTVNSWCG++ +L LL
Sbjct: 8   RGLNKPCILLIVVAGMERFAFKGVVSNLVTYLTDVVKMSNSTAAKTVNSWCGLTSMLALL 67

Query: 73  GAFLADSFLDRYSTILASSFLYVV 2
            A LADS+  RYSTILASSFLY++
Sbjct: 68  VAPLADSYWYRYSTILASSFLYII 91


>emb|CBI34989.3| unnamed protein product [Vitis vinifera]
          Length = 549

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/84 (77%), Positives = 75/84 (89%)
 Frame = -2

Query: 253 KGLGKSCILLIVVAGVERFAFKGVASNLVTYLTEVVKMSNSSAAKTVNSWCGVSFLLPLL 74
           +GL K CILLIVVAG+ERFAFKGV SNLVTYLT+VVKMSNS+AAKTVNSWCG++ +L LL
Sbjct: 8   RGLNKPCILLIVVAGMERFAFKGVVSNLVTYLTDVVKMSNSTAAKTVNSWCGLTSMLALL 67

Query: 73  GAFLADSFLDRYSTILASSFLYVV 2
            A LADS+  RYSTILASSFLY++
Sbjct: 68  VAPLADSYWYRYSTILASSFLYII 91


>ref|XP_002305027.1| predicted protein [Populus trichocarpa] gi|222847991|gb|EEE85538.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  128 bits (322), Expect = 4e-28
 Identities = 66/84 (78%), Positives = 76/84 (90%)
 Frame = -2

Query: 253 KGLGKSCILLIVVAGVERFAFKGVASNLVTYLTEVVKMSNSSAAKTVNSWCGVSFLLPLL 74
           KGL +SC LLIV+AG+ERFAFKGVASNLVTYLT+VV MSNS+AAKTVN+WCG + +LPLL
Sbjct: 8   KGLNRSCFLLIVIAGMERFAFKGVASNLVTYLTDVVMMSNSAAAKTVNNWCGFTSMLPLL 67

Query: 73  GAFLADSFLDRYSTILASSFLYVV 2
            A LADS+ DRYSTIL+SSFLYVV
Sbjct: 68  VASLADSW-DRYSTILSSSFLYVV 90


>ref|XP_002517413.1| amino acid permease, putative [Ricinus communis]
           gi|223543424|gb|EEF44955.1| amino acid permease,
           putative [Ricinus communis]
          Length = 536

 Score =  127 bits (320), Expect = 7e-28
 Identities = 63/84 (75%), Positives = 74/84 (88%)
 Frame = -2

Query: 253 KGLGKSCILLIVVAGVERFAFKGVASNLVTYLTEVVKMSNSSAAKTVNSWCGVSFLLPLL 74
           KG  KSC LLIV+AG+ERFAFKGVASNLVTYLT+VVK+SNS+AAKTVN+WCG + +LPLL
Sbjct: 8   KGFNKSCFLLIVIAGIERFAFKGVASNLVTYLTDVVKLSNSAAAKTVNNWCGFTSMLPLL 67

Query: 73  GAFLADSFLDRYSTILASSFLYVV 2
            A LADS  D++ TILASS+LYVV
Sbjct: 68  VASLADSCWDKHPTILASSYLYVV 91


Top