BLASTX nr result

ID: Coptis23_contig00024127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024127
         (1586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282947.1| PREDICTED: uncharacterized protein LOC100248...   478   e-132
ref|XP_004172977.1| PREDICTED: uncharacterized LOC101206044 [Cuc...   464   e-128
ref|XP_004141389.1| PREDICTED: uncharacterized protein LOC101206...   464   e-128
ref|XP_002327169.1| predicted protein [Populus trichocarpa] gi|2...   458   e-126
ref|XP_002510181.1| nucleic acid binding protein, putative [Rici...   453   e-125

>ref|XP_002282947.1| PREDICTED: uncharacterized protein LOC100248940 [Vitis vinifera]
          Length = 444

 Score =  478 bits (1229), Expect = e-132
 Identities = 240/330 (72%), Positives = 274/330 (83%), Gaps = 3/330 (0%)
 Frame = -1

Query: 1400 AAVTDIDMVRNRQGIYSAKPKRVVVLWDLDNKPPRGPPYQAAMALIQLAQCFGHVVDISA 1221
            +A  +IDMVRN+ G+Y+AK K+VVVLWDLDNKPPRGPPY AA ALI+LAQ FG +VDISA
Sbjct: 74   SAADEIDMVRNKDGVYTAKRKKVVVLWDLDNKPPRGPPYAAATALIELAQRFGDIVDISA 133

Query: 1220 YANRHAFILLPQWVREERSQRKQVDVLERKGMITPSEPYVCNVCGRKCRTNLDLKKHFKQ 1041
            YANRHAF+ LPQWV EER +R+++D LERKG+ TP+EPY+C VCGRKCRTNLDLKKHFKQ
Sbjct: 134  YANRHAFVHLPQWVLEERHERRRMDFLERKGITTPAEPYICGVCGRKCRTNLDLKKHFKQ 193

Query: 1040 LHEREREKKLSRMRSLKGKKRQEYKERFISGNTKYEEGARNLLSPKVGYGLASELRRAGV 861
            LHERER+KKL+RMRSLKGKKRQ YKE+FISGNTKYEE AR+L++PKVGYGLASELRRAGV
Sbjct: 194  LHERERQKKLNRMRSLKGKKRQRYKEKFISGNTKYEEAARSLITPKVGYGLASELRRAGV 253

Query: 860  FVKMVEDKPQSADRALKRQMQHSMSRGIDWMFLVTDDSDFSDMLRSARESNLQTVVVGDS 681
            FVK VEDKPQ+AD ALKRQMQHSMSRGIDW+ LV+DDSDF+DMLR ARESNL TVVVGD 
Sbjct: 254  FVKTVEDKPQAADWALKRQMQHSMSRGIDWLVLVSDDSDFADMLRRARESNLGTVVVGDW 313

Query: 680  DRALGRNADLWVPWLRVENGEIGEEELFSARTERDEFSHMDNDGGLFSLTEFDEDSDYES 501
             RALGR+ADLWVPW  VEN E+ EE+L      R +F   D D GLFS+T F+ D     
Sbjct: 314  HRALGRHADLWVPWTGVENREVTEEDLRPRNRRRSDFE--DRDDGLFSVTHFNGDGIGGG 371

Query: 500  DLDQVVDELVGTNSH---VKISAFSEGEEE 420
             LD +VDELV   S    V ISAFSEGEE+
Sbjct: 372  ILDGLVDELVVNRSECNGVNISAFSEGEED 401


>ref|XP_004172977.1| PREDICTED: uncharacterized LOC101206044 [Cucumis sativus]
          Length = 420

 Score =  464 bits (1195), Expect = e-128
 Identities = 237/356 (66%), Positives = 288/356 (80%), Gaps = 8/356 (2%)
 Frame = -1

Query: 1463 LKPDFKTSKR--LHTITCCASKHAAVTDIDMVRNRQGIYSAKPKRVVVLWDLDNKPPRGP 1290
            +KP F+ S R  +       +  A+ + IDMVRNR+GI++AK  +VVVLWDLDNKPPRGP
Sbjct: 40   VKPTFQASFRWRIRATAENGASSASTSQIDMVRNREGIFTAKQSKVVVLWDLDNKPPRGP 99

Query: 1289 PYQAAMALIQLAQCFGHVVDISAYANRHAFILLPQWVREERSQRKQVDVLERKGMITPSE 1110
            PY+AAMAL ++AQ FG VVD+SAYANRHAFI LPQWV EER +R+Q+D+LERKG+ TPSE
Sbjct: 100  PYEAAMALKRVAQRFGQVVDMSAYANRHAFIHLPQWVVEERRERRQLDILERKGLFTPSE 159

Query: 1109 PYVCNVCGRKCRTNLDLKKHFKQLHEREREKKLSRMRSLKGKKRQEYKERFISGNTKYEE 930
             YVC VCGRKC+TNLDLKKHFKQLHERER+KKL+RMRSLKGKKRQ YKERF+SGN KY E
Sbjct: 160  SYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMRSLKGKKRQRYKERFVSGNHKYNE 219

Query: 929  GARNLLSPKVGYGLASELRRAGVFVKMVEDKPQSADRALKRQMQHSMSRGIDWMFLVTDD 750
             AR++++PKVGYGLASELRRAG FVK VEDKPQ+AD ALK+QMQHSMSRGIDWMFLV+DD
Sbjct: 220  AARSVITPKVGYGLASELRRAGFFVKTVEDKPQAADWALKKQMQHSMSRGIDWMFLVSDD 279

Query: 749  SDFSDMLRSARESNLQTVVVGDSDRALGRNADLWVPWLRVENGEIGEEELFSAR---TER 579
            SDFS+MLR A+E+NL TVVVGD DRALGR+ADLWVPW+ VENG++ EE+L   +     R
Sbjct: 280  SDFSEMLRKAKEANLGTVVVGDRDRALGRHADLWVPWMGVENGDVTEEDLVPKKWRMRRR 339

Query: 578  DEFSHMDNDGGLFSLTEFDEDSDYESDLDQVVDELVGTNSH---VKISAFSEGEEE 420
            D+     +DG  FS++ F  D    SDL+ VV+EL  T++    ++ISAFSEGE++
Sbjct: 340  DKEVDEGDDG--FSVSSFYGDI-AGSDLESVVEELASTSTEFNGLRISAFSEGEDD 392


>ref|XP_004141389.1| PREDICTED: uncharacterized protein LOC101206044 [Cucumis sativus]
          Length = 420

 Score =  464 bits (1195), Expect = e-128
 Identities = 237/356 (66%), Positives = 288/356 (80%), Gaps = 8/356 (2%)
 Frame = -1

Query: 1463 LKPDFKTSKR--LHTITCCASKHAAVTDIDMVRNRQGIYSAKPKRVVVLWDLDNKPPRGP 1290
            +KP F+ S R  +       +  A+ + IDMVRNR+GI++AK  +VVVLWDLDNKPPRGP
Sbjct: 40   VKPTFQASFRWRIRATAENGASSASTSQIDMVRNREGIFTAKQSKVVVLWDLDNKPPRGP 99

Query: 1289 PYQAAMALIQLAQCFGHVVDISAYANRHAFILLPQWVREERSQRKQVDVLERKGMITPSE 1110
            PY+AAMAL ++AQ FG VVD+SAYANRHAFI LPQWV EER +R+Q+D+LERKG+ TPSE
Sbjct: 100  PYEAAMALKRVAQRFGQVVDMSAYANRHAFIHLPQWVVEERRERRQLDILERKGLFTPSE 159

Query: 1109 PYVCNVCGRKCRTNLDLKKHFKQLHEREREKKLSRMRSLKGKKRQEYKERFISGNTKYEE 930
             YVC VCGRKC+TNLDLKKHFKQLHERER+KKL+RMRSLKGKKRQ YKERF+SGN KY E
Sbjct: 160  SYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMRSLKGKKRQRYKERFVSGNHKYNE 219

Query: 929  GARNLLSPKVGYGLASELRRAGVFVKMVEDKPQSADRALKRQMQHSMSRGIDWMFLVTDD 750
             AR++++PKVGYGLASELRRAG FVK VEDKPQ+AD ALK+QMQHSMSRGIDWMFLV+DD
Sbjct: 220  AARSVITPKVGYGLASELRRAGFFVKTVEDKPQAADWALKKQMQHSMSRGIDWMFLVSDD 279

Query: 749  SDFSDMLRSARESNLQTVVVGDSDRALGRNADLWVPWLRVENGEIGEEELFSAR---TER 579
            SDFS+MLR A+E+NL TVVVGD DRALGR+ADLWVPW+ VENG++ EE+L   +     R
Sbjct: 280  SDFSEMLRKAKEANLGTVVVGDRDRALGRHADLWVPWMGVENGDVTEEDLVPKKWRMRRR 339

Query: 578  DEFSHMDNDGGLFSLTEFDEDSDYESDLDQVVDELVGTNSH---VKISAFSEGEEE 420
            D+     +DG  FS++ F  D    SDL+ VV+EL  T++    ++ISAFSEGE++
Sbjct: 340  DKEVDEGDDG--FSVSSFYGDI-AGSDLESVVEELASTSTEFNGLRISAFSEGEDD 392


>ref|XP_002327169.1| predicted protein [Populus trichocarpa] gi|222835484|gb|EEE73919.1|
            predicted protein [Populus trichocarpa]
          Length = 345

 Score =  458 bits (1179), Expect = e-126
 Identities = 226/324 (69%), Positives = 271/324 (83%), Gaps = 4/324 (1%)
 Frame = -1

Query: 1379 MVRNRQGIYSAKPKRVVVLWDLDNKPPRGPPYQAAMALIQLAQCFGHVVDISAYANRHAF 1200
            MV+NRQGIY++K  +VVVLWDLDNKPPRGPPY AAMAL  +AQ FG V+D+ AYANRHAF
Sbjct: 1    MVKNRQGIYTSKQNKVVVLWDLDNKPPRGPPYPAAMALKTVAQRFGEVIDMCAYANRHAF 60

Query: 1199 ILLPQWVREERSQRKQVDVLERKGMITPSEPYVCNVCGRKCRTNLDLKKHFKQLHERERE 1020
            I LP WV EER +RK +D+LERK +++PS+PYVC VCGRKC+TNLDLKKHFKQLHERER+
Sbjct: 61   IHLPHWVLEERRERKHLDILERKEIVSPSQPYVCGVCGRKCKTNLDLKKHFKQLHERERQ 120

Query: 1019 KKLSRMRSLKGKKRQEYKERFISGNTKYEEGARNLLSPKVGYGLASELRRAGVFVKMVED 840
            KK++RMRSLKGKKRQ YKERF+SGN KY E AR LL+PK+GYGLA+EL+RAGV+VK VED
Sbjct: 121  KKVNRMRSLKGKKRQRYKERFVSGNHKYNEEARRLLTPKIGYGLAAELKRAGVYVKTVED 180

Query: 839  KPQSADRALKRQMQHSMSRGIDWMFLVTDDSDFSDMLRSARESNLQTVVVGDSDRALGRN 660
            KPQ+AD ALKRQ++HSMSRG+DW+ LV+DDSDFS++LR ARE+NL TVVVGD DRALGR+
Sbjct: 181  KPQAADWALKRQIEHSMSRGVDWLVLVSDDSDFSEILRKAREANLGTVVVGDRDRALGRH 240

Query: 659  ADLWVPWLRVENGEIGEEELFSARTERDEFSHMDNDGGLFSLTEFDEDSDY-ESDLDQVV 483
            ADLWVPW+ VENGE+ E++L      R E   ++ND GLFS+T+FDED DY  +DL+  V
Sbjct: 241  ADLWVPWIGVENGELTEKDLVPKGRWRSE--DLENDEGLFSVTDFDEDGDYGGNDLEGFV 298

Query: 482  DELVGTNS---HVKISAFSEGEEE 420
            D LV   S     +ISAFSEGEEE
Sbjct: 299  DGLVMARSGFNGTRISAFSEGEEE 322


>ref|XP_002510181.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223550882|gb|EEF52368.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 413

 Score =  453 bits (1165), Expect = e-125
 Identities = 218/333 (65%), Positives = 273/333 (81%), Gaps = 6/333 (1%)
 Frame = -1

Query: 1400 AAVTDIDMVRNRQGIYSAKPKRVVVLWDLDNKPPRGPPYQAAMALIQLAQCFGHVVDISA 1221
            A+ ++IDMV NRQG+Y++K  +VVVLWDLDNKPPRGPPY AA+AL  LAQ FG ++++SA
Sbjct: 61   ASTSEIDMVPNRQGVYTSKKSKVVVLWDLDNKPPRGPPYLAALALKNLAQKFGEIIEMSA 120

Query: 1220 YANRHAFILLPQWVREERSQRKQVDVLERKGMITPSEPYVCNVCGRKCRTNLDLKKHFKQ 1041
            YANRHAFI LP WV +ER +RKQ+D+LERKG++  ++PY+C VCGRKC+TN++LKKHFKQ
Sbjct: 121  YANRHAFIHLPNWVLQERRERKQLDILERKGLVNQTDPYICGVCGRKCKTNMELKKHFKQ 180

Query: 1040 LHEREREKKLSRMRSLKGKKRQEYKERFISGNTKYEEGARNLLSPKVGYGLASELRRAGV 861
            LHERER+KKL+RMRSLKGKKRQ +KERFISGN KY E A+ LL+PKVGYGLA EL+RAGV
Sbjct: 181  LHERERQKKLNRMRSLKGKKRQRFKERFISGNHKYNEEAKKLLTPKVGYGLAQELKRAGV 240

Query: 860  FVKMVEDKPQSADRALKRQMQHSMSRGIDWMFLVTDDSDFSDMLRSARESNLQTVVVGDS 681
            +VK V+DKPQ+AD ALKRQ++HSMSRG+DW+FL++DDSDFSD+LR ARE+NL TVVVGD 
Sbjct: 241  YVKTVQDKPQAADWALKRQIEHSMSRGVDWLFLISDDSDFSDILRRAREANLGTVVVGDR 300

Query: 680  DRALGRNADLWVPWLRVENGEIGEEEL-FSARTERDEFSHMDNDGGLFSLTEFDED--SD 510
            DRALGR+ADLWVPW+ VENGE+ E +L   +R E + F   D   G FS+T FD +    
Sbjct: 301  DRALGRHADLWVPWIGVENGEVTENDLVLKSRIESENF---DGKDGFFSITHFDGEIGGV 357

Query: 509  YESDLDQVVDELVGTNSH---VKISAFSEGEEE 420
             E D+D V++EL G +S     ++S FSEGEEE
Sbjct: 358  VEGDMDGVIEELAGVSSEWDSARVSVFSEGEEE 390


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