BLASTX nr result

ID: Coptis23_contig00024117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024117
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP47579.1| receptor kinase Lecrk [Gossypium hirsutum]             182   2e-44
ref|XP_002333002.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-43
ref|XP_002309077.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
ref|XP_002333003.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42
ref|XP_003529112.1| PREDICTED: L-type lectin-domain containing r...   171   4e-41

>gb|AAP47579.1| receptor kinase Lecrk [Gossypium hirsutum]
          Length = 641

 Score =  182 bits (463), Expect = 2e-44
 Identities = 93/163 (57%), Positives = 119/163 (73%), Gaps = 2/163 (1%)
 Frame = +3

Query: 3   GFLYNGFKNANLSLDGLAEITGNGLLRLTNNTKQMTGHAFHPKPFQFKNLSSNGSTLSFS 182
           GF+YNGF++ANL+LDG+AE+T NGLL+LTN T Q TGHAF+P P  FKN S+NGS  SFS
Sbjct: 23  GFIYNGFRSANLNLDGIAELTSNGLLKLTNKTVQETGHAFYPHPVDFKN-STNGSVFSFS 81

Query: 183 TTFVFAIVPKYSDLSGPGICFVIAPSRSLPGALPTQYLGLFNYTSNGDPSNHVVAVELDT 362
           +TFVFAI+P+Y  LSG GI FVIAP++ LPG+LP+QYLGLFN ++NG+ +NHVVAVELDT
Sbjct: 82  STFVFAILPEYPTLSGHGIAFVIAPTKGLPGSLPSQYLGLFNGSNNGNDTNHVVAVELDT 141

Query: 363 VVNKEFXXXXXXXXXXXXXXXTSAVSASAKYY--TGGNYKNLS 485
           + + EF                S  S+ A YY     ++KNL+
Sbjct: 142 IRSTEFDDINDNHVGIDINGLKSPTSSPAGYYEDDSHDFKNLT 184


>ref|XP_002333002.1| predicted protein [Populus trichocarpa] gi|222834497|gb|EEE72974.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score =  177 bits (450), Expect = 6e-43
 Identities = 90/152 (59%), Positives = 109/152 (71%)
 Frame = +3

Query: 6   FLYNGFKNANLSLDGLAEITGNGLLRLTNNTKQMTGHAFHPKPFQFKNLSSNGSTLSFST 185
           F ++GF++ NLSLDGLAE+T NGLLRLTN T   TGHAF+P P  FKN S N +  +FST
Sbjct: 25  FTFSGFRSTNLSLDGLAELTSNGLLRLTNETYHRTGHAFYPNPVTFKN-SINSTAFTFST 83

Query: 186 TFVFAIVPKYSDLSGPGICFVIAPSRSLPGALPTQYLGLFNYTSNGDPSNHVVAVELDTV 365
           TFVFAI+P+Y+ L G GI FVIAP+R LPGALP+QYLGLFN T+NG+ +NHVVAVELDT+
Sbjct: 84  TFVFAIIPEYATLGGHGIAFVIAPTRGLPGALPSQYLGLFNKTNNGNQNNHVVAVELDTI 143

Query: 366 VNKEFXXXXXXXXXXXXXXXTSAVSASAKYYT 461
            + EF                S  SASA YY+
Sbjct: 144 YSSEFNDIDDNHVGIDINGIESERSASAGYYS 175


>ref|XP_002309077.1| predicted protein [Populus trichocarpa] gi|222855053|gb|EEE92600.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  176 bits (445), Expect = 2e-42
 Identities = 85/125 (68%), Positives = 101/125 (80%)
 Frame = +3

Query: 6   FLYNGFKNANLSLDGLAEITGNGLLRLTNNTKQMTGHAFHPKPFQFKNLSSNGSTLSFST 185
           F Y+GF++ NLSLDGLAE+T NGLLRLTN TKQ T HAF+P P  FKN S N +  +FST
Sbjct: 20  FTYSGFRSTNLSLDGLAELTSNGLLRLTNETKQRTSHAFYPNPVTFKN-SINSTAFTFST 78

Query: 186 TFVFAIVPKYSDLSGPGICFVIAPSRSLPGALPTQYLGLFNYTSNGDPSNHVVAVELDTV 365
           TFVFAI+P+Y  L G GI FVIAP+R LPGALP+QYLGLFN T+NG+ +NHVVAVELDT+
Sbjct: 79  TFVFAIIPEYPTLGGHGIAFVIAPTRGLPGALPSQYLGLFNKTNNGNQTNHVVAVELDTI 138

Query: 366 VNKEF 380
            + EF
Sbjct: 139 YSSEF 143


>ref|XP_002333003.1| predicted protein [Populus trichocarpa] gi|222834498|gb|EEE72975.1|
           predicted protein [Populus trichocarpa]
          Length = 623

 Score =  174 bits (441), Expect = 7e-42
 Identities = 89/157 (56%), Positives = 109/157 (69%)
 Frame = +3

Query: 6   FLYNGFKNANLSLDGLAEITGNGLLRLTNNTKQMTGHAFHPKPFQFKNLSSNGSTLSFST 185
           F ++GF++ NLSLDGLAE+T NGLLRLTN TK  T HAF+P P  FKN S N +  +FST
Sbjct: 25  FTFSGFRSTNLSLDGLAELTSNGLLRLTNETKLRTSHAFYPNPVTFKN-SINSTAFTFST 83

Query: 186 TFVFAIVPKYSDLSGPGICFVIAPSRSLPGALPTQYLGLFNYTSNGDPSNHVVAVELDTV 365
            FVFAI+P+Y+   G GI FVIAP+R LPGALP+Q+LGLFN T+NG+ +NHVVAVELDT+
Sbjct: 84  AFVFAIIPEYASFGGHGIAFVIAPTRGLPGALPSQHLGLFNETNNGNQTNHVVAVELDTI 143

Query: 366 VNKEFXXXXXXXXXXXXXXXTSAVSASAKYYTGGNYK 476
            N +F                S  SASA YY+  N K
Sbjct: 144 YNSDFNDINDNHVGIDINGLVSERSASAGYYSQLNGK 180


>ref|XP_003529112.1| PREDICTED: L-type lectin-domain containing receptor kinase
           IV.1-like [Glycine max]
          Length = 667

 Score =  171 bits (434), Expect = 4e-41
 Identities = 86/160 (53%), Positives = 113/160 (70%)
 Frame = +3

Query: 6   FLYNGFKNANLSLDGLAEITGNGLLRLTNNTKQMTGHAFHPKPFQFKNLSSNGSTLSFST 185
           F YNGF++++L LDG AE T NG+++LTN+TKQ  GHAF P P  FKN ++NGS  SFST
Sbjct: 24  FTYNGFQSSHLYLDGSAEFTTNGMVKLTNHTKQQKGHAFFPSPIVFKN-TTNGSVFSFST 82

Query: 186 TFVFAIVPKYSDLSGPGICFVIAPSRSLPGALPTQYLGLFNYTSNGDPSNHVVAVELDTV 365
           TFVFAI  ++ +LSG GI FV++P++ +P +LP+QYLGLF+ T+NG+ SNHV  VELDT+
Sbjct: 83  TFVFAIRSEFPNLSGHGIAFVVSPTKEVPHSLPSQYLGLFDDTNNGNNSNHVFGVELDTI 142

Query: 366 VNKEFXXXXXXXXXXXXXXXTSAVSASAKYYTGGNYKNLS 485
           +N EF                S  SASA YY+ G +KNLS
Sbjct: 143 LNTEFGDINDNHVGIDVNELKSVKSASAGYYSDGGFKNLS 182


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