BLASTX nr result

ID: Coptis23_contig00024116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024116
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP47579.1| receptor kinase Lecrk [Gossypium hirsutum]             232   2e-59
ref|XP_002333002.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
ref|XP_002534539.1| kinase, putative [Ricinus communis] gi|22352...   215   3e-54
ref|XP_003632669.1| PREDICTED: L-type lectin-domain containing r...   213   1e-53
emb|CBI30516.3| unnamed protein product [Vitis vinifera]              213   1e-53

>gb|AAP47579.1| receptor kinase Lecrk [Gossypium hirsutum]
          Length = 641

 Score =  232 bits (592), Expect = 2e-59
 Identities = 114/169 (67%), Positives = 142/169 (84%)
 Frame = +1

Query: 10  ALEDHGFIYNGFKNANLSLDGLAVITGSGLLRLTNNTKQMTGHAFYPKPFLFKNLSSNGS 189
           A ED GFIYNGF++ANL+LDG+A +T +GLL+LTN T Q TGHAFYP P  FKN S+NGS
Sbjct: 18  AAEDVGFIYNGFRSANLNLDGIAELTSNGLLKLTNKTVQETGHAFYPHPVDFKN-STNGS 76

Query: 190 TLSFSTTFVFAIVPKYSDVSGHGISFVVAPSRSLPGALPSQYLGLFNGTSNGDPSNHVVA 369
             SFS+TFVFAI+P+Y  +SGHGI+FV+AP++ LPG+LPSQYLGLFNG++NG+ +NHVVA
Sbjct: 77  VFSFSSTFVFAILPEYPTLSGHGIAFVIAPTKGLPGSLPSQYLGLFNGSNNGNDTNHVVA 136

Query: 370 VELDTIYSSEFGDINDNHVGIDLNNLRSAISAPAKYYLDRTGDNYKNLS 516
           VELDTI S+EF DINDNHVGID+N L+S  S+PA YY D + D +KNL+
Sbjct: 137 VELDTIRSTEFDDINDNHVGIDINGLKSPTSSPAGYYEDDSHD-FKNLT 184


>ref|XP_002333002.1| predicted protein [Populus trichocarpa] gi|222834497|gb|EEE72974.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score =  216 bits (549), Expect = 2e-54
 Identities = 104/157 (66%), Positives = 126/157 (80%)
 Frame = +1

Query: 10  ALEDHGFIYNGFKNANLSLDGLAVITGSGLLRLTNNTKQMTGHAFYPKPFLFKNLSSNGS 189
           A +D  F ++GF++ NLSLDGLA +T +GLLRLTN T   TGHAFYP P  FKN S N +
Sbjct: 19  ASQDFNFTFSGFRSTNLSLDGLAELTSNGLLRLTNETYHRTGHAFYPNPVTFKN-SINST 77

Query: 190 TLSFSTTFVFAIVPKYSDVSGHGISFVVAPSRSLPGALPSQYLGLFNGTSNGDPSNHVVA 369
             +FSTTFVFAI+P+Y+ + GHGI+FV+AP+R LPGALPSQYLGLFN T+NG+ +NHVVA
Sbjct: 78  AFTFSTTFVFAIIPEYATLGGHGIAFVIAPTRGLPGALPSQYLGLFNKTNNGNQNNHVVA 137

Query: 370 VELDTIYSSEFGDINDNHVGIDLNNLRSAISAPAKYY 480
           VELDTIYSSEF DI+DNHVGID+N + S  SA A YY
Sbjct: 138 VELDTIYSSEFNDIDDNHVGIDINGIESERSASAGYY 174


>ref|XP_002534539.1| kinase, putative [Ricinus communis] gi|223525084|gb|EEF27843.1|
           kinase, putative [Ricinus communis]
          Length = 669

 Score =  215 bits (548), Expect = 3e-54
 Identities = 109/167 (65%), Positives = 130/167 (77%)
 Frame = +1

Query: 16  EDHGFIYNGFKNANLSLDGLAVITGSGLLRLTNNTKQMTGHAFYPKPFLFKNLSSNGSTL 195
           +D  F YNGF++ANLSLDG+A IT +GLLRLTN+TKQ  GHAFYP P  F+    NGS +
Sbjct: 19  QDLSFTYNGFRSANLSLDGIAAITSNGLLRLTNHTKQQKGHAFYPNPITFER-PLNGSAV 77

Query: 196 SFSTTFVFAIVPKYSDVSGHGISFVVAPSRSLPGALPSQYLGLFNGTSNGDPSNHVVAVE 375
           +FSTTFVFAIV +  D+SGHGI+FV++P R LP +LPSQYLGLFN  +NG+  NHVVAVE
Sbjct: 78  TFSTTFVFAIVSEIPDLSGHGIAFVISPKRGLPESLPSQYLGLFNENNNGNDINHVVAVE 137

Query: 376 LDTIYSSEFGDINDNHVGIDLNNLRSAISAPAKYYLDRTGDNYKNLS 516
           LDTIYSSEFGDINDNHV ID+N LRS  SA A Y+ +  G+   NLS
Sbjct: 138 LDTIYSSEFGDINDNHVAIDINGLRSVQSAAAGYHAN-PGNRTTNLS 183


>ref|XP_003632669.1| PREDICTED: L-type lectin-domain containing receptor kinase IV.2-like
            [Vitis vinifera]
          Length = 1258

 Score =  213 bits (542), Expect = 1e-53
 Identities = 110/168 (65%), Positives = 130/168 (77%), Gaps = 1/168 (0%)
 Frame = +1

Query: 16   EDHGFIYNGFKNA-NLSLDGLAVITGSGLLRLTNNTKQMTGHAFYPKPFLFKNLSSNGST 192
            ED  F YNGF+ A NLSLDGLA  T +GLL LTN TKQ TGHAFY  P  FKN SSN   
Sbjct: 610  EDVSFTYNGFQTAANLSLDGLAQFTPNGLLILTNRTKQETGHAFYSHPMRFKN-SSNAPA 668

Query: 193  LSFSTTFVFAIVPKYSDVSGHGISFVVAPSRSLPGALPSQYLGLFNGTSNGDPSNHVVAV 372
             SFSTTFVFAI P+Y  +SGHGI+FV+AP+R LPGALPSQ+LGLF+  +NG+ +NH+VAV
Sbjct: 669  FSFSTTFVFAIHPQYPTLSGHGIAFVIAPTRGLPGALPSQHLGLFSDANNGNSTNHIVAV 728

Query: 373  ELDTIYSSEFGDINDNHVGIDLNNLRSAISAPAKYYLDRTGDNYKNLS 516
            ELDTI + E GDINDNHVGID+N L+S  +APA Y+  + GD +KNLS
Sbjct: 729  ELDTIQNEELGDINDNHVGIDINGLKSDKAAPAGYFASKNGD-FKNLS 775



 Score =  170 bits (431), Expect = 1e-40
 Identities = 87/162 (53%), Positives = 112/162 (69%), Gaps = 2/162 (1%)
 Frame = +1

Query: 34  YNGFKN--ANLSLDGLAVITGSGLLRLTNNTKQMTGHAFYPKPFLFKNLSSNGSTLSFST 207
           Y GF +  ANL+  G+A I   G+LRLTN T ++ GHAF+  P  FKN S+NG+  SFST
Sbjct: 28  YGGFSDVGANLTKTGVAEIDKDGILRLTNETSRLMGHAFHSFPLQFKN-STNGTAFSFST 86

Query: 208 TFVFAIVPKYSDVSGHGISFVVAPSRSLPGALPSQYLGLFNGTSNGDPSNHVVAVELDTI 387
           +F FAIVP+Y  + GHG +F ++PS+ L GALPSQYLGL N +  G+ SNH+ AVE DT+
Sbjct: 87  SFAFAIVPEYPKLGGHGFAFAISPSKELRGALPSQYLGLLNASDIGNFSNHLFAVEFDTV 146

Query: 388 YSSEFGDINDNHVGIDLNNLRSAISAPAKYYLDRTGDNYKNL 513
              EF DINDNHVGID+++L S  S+PA YY D +     NL
Sbjct: 147 KDFEFEDINDNHVGIDIDSLESNASSPAAYYTDDSTQQSINL 188


>emb|CBI30516.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  213 bits (542), Expect = 1e-53
 Identities = 110/168 (65%), Positives = 130/168 (77%), Gaps = 1/168 (0%)
 Frame = +1

Query: 16  EDHGFIYNGFKNA-NLSLDGLAVITGSGLLRLTNNTKQMTGHAFYPKPFLFKNLSSNGST 192
           ED  F YNGF+ A NLSLDGLA  T +GLL LTN TKQ TGHAFY  P  FKN SSN   
Sbjct: 69  EDVSFTYNGFQTAANLSLDGLAQFTPNGLLILTNRTKQETGHAFYSHPMRFKN-SSNAPA 127

Query: 193 LSFSTTFVFAIVPKYSDVSGHGISFVVAPSRSLPGALPSQYLGLFNGTSNGDPSNHVVAV 372
            SFSTTFVFAI P+Y  +SGHGI+FV+AP+R LPGALPSQ+LGLF+  +NG+ +NH+VAV
Sbjct: 128 FSFSTTFVFAIHPQYPTLSGHGIAFVIAPTRGLPGALPSQHLGLFSDANNGNSTNHIVAV 187

Query: 373 ELDTIYSSEFGDINDNHVGIDLNNLRSAISAPAKYYLDRTGDNYKNLS 516
           ELDTI + E GDINDNHVGID+N L+S  +APA Y+  + GD +KNLS
Sbjct: 188 ELDTIQNEELGDINDNHVGIDINGLKSDKAAPAGYFASKNGD-FKNLS 234


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