BLASTX nr result

ID: Coptis23_contig00024113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024113
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321359.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
ref|XP_002519603.1| conserved hypothetical protein [Ricinus comm...    95   5e-18
ref|XP_002966238.1| hypothetical protein SELMODRAFT_407613 [Sela...    70   2e-10
ref|XP_002982310.1| hypothetical protein SELMODRAFT_421789 [Sela...    70   2e-10
ref|XP_003532769.1| PREDICTED: uncharacterized protein LOC100794...    65   4e-09

>ref|XP_002321359.1| predicted protein [Populus trichocarpa] gi|222868355|gb|EEF05486.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/80 (63%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
 Frame = -2

Query: 299 LSFSASLPDDVQGVYA-DSICAVKYTMDPFVDLRESILEMIKNVGVRNWEEMEELIYCYV 123
           +S SASLP+DV G ++ D+ICAVK + DPF D+R SILEMI+NVGV +W+EMEEL+YCY+
Sbjct: 21  ISLSASLPEDVCGAFSGDTICAVKLSKDPFSDMRASILEMIQNVGVHDWDEMEELVYCYI 80

Query: 122 VLNSSEIHGFIVQAFLSLCC 63
            LNS ++HG I  AFLSL C
Sbjct: 81  ALNSPDLHGIIANAFLSLSC 100


>ref|XP_002519603.1| conserved hypothetical protein [Ricinus communis]
           gi|223541193|gb|EEF42748.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 99

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/91 (53%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
 Frame = -2

Query: 329 KKHSRHYTTTLSFSASLPDDVQGVYADSICAVKYTMDPFVDLRESILEMIKNVGVRNWEE 150
           KK   + +  +SFSASLP+DV G  A SI  VK ++DPF +L+ SI+EMI+ + VR+W  
Sbjct: 3   KKIWHNRSNRISFSASLPEDVCGELAGSIGIVKLSVDPFSELKASIVEMIEELDVRDWNA 62

Query: 149 MEELIYCYVVLN-SSEIHGFIVQAFLSLCCS 60
           MEEL+YCY+VLN SS++H  I  AF+SLC S
Sbjct: 63  MEELVYCYIVLNSSSQVHHIIKDAFVSLCDS 93


>ref|XP_002966238.1| hypothetical protein SELMODRAFT_407613 [Selaginella moellendorffii]
           gi|300165658|gb|EFJ32265.1| hypothetical protein
           SELMODRAFT_407613 [Selaginella moellendorffii]
          Length = 227

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/94 (37%), Positives = 56/94 (59%)
 Frame = -2

Query: 350 KLTEKRMKKHSRHYTTTLSFSASLPDDVQGVYADSICAVKYTMDPFVDLRESILEMIKNV 171
           K+T +R + HS         SA+LP D++G  +++I  V  + DP+ D R S+ +M++  
Sbjct: 126 KITRQRRRNHS--------LSAALPPDLRGPASNAIPLVMESCDPYNDFRVSMEQMVREN 177

Query: 170 GVRNWEEMEELIYCYVVLNSSEIHGFIVQAFLSL 69
           G+  W E++EL+YCY+ LNS + H  I  AF  L
Sbjct: 178 GIFEWPELQELLYCYIALNSPDQHESIKLAFADL 211


>ref|XP_002982310.1| hypothetical protein SELMODRAFT_421789 [Selaginella moellendorffii]
           gi|300149902|gb|EFJ16555.1| hypothetical protein
           SELMODRAFT_421789 [Selaginella moellendorffii]
          Length = 227

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/94 (37%), Positives = 56/94 (59%)
 Frame = -2

Query: 350 KLTEKRMKKHSRHYTTTLSFSASLPDDVQGVYADSICAVKYTMDPFVDLRESILEMIKNV 171
           K+T +R + HS         SA+LP D++G  +++I  V  + DP+ D R S+ +M++  
Sbjct: 126 KITRQRRRNHS--------LSAALPPDLRGPASNAIPLVMESCDPYNDFRVSMEQMVREN 177

Query: 170 GVRNWEEMEELIYCYVVLNSSEIHGFIVQAFLSL 69
           G+  W E++EL+YCY+ LNS + H  I  AF  L
Sbjct: 178 GIFEWPELQELLYCYIALNSPDQHESIKLAFADL 211


>ref|XP_003532769.1| PREDICTED: uncharacterized protein LOC100794362 [Glycine max]
          Length = 404

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/98 (38%), Positives = 54/98 (55%)
 Frame = -2

Query: 371 VQAMEAKKLTEKRMKKHSRHYTTTLSFSASLPDDVQGVYADSICAVKYTMDPFVDLRESI 192
           ++AME KK  + +MKK       T           +G+  DS   VK ++DP  D R+S+
Sbjct: 304 IKAMEEKKKAKLKMKKEEEIVEET----------EEGL--DSFAVVKCSLDPQKDFRDSM 351

Query: 191 LEMIKNVGVRNWEEMEELIYCYVVLNSSEIHGFIVQAF 78
           +EMI    +   EEME+L+ CY+ LNSSE H  I+Q F
Sbjct: 352 IEMITEKQISEPEEMEDLLACYLTLNSSEYHDLIIQVF 389


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