BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024112
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indi...    48   9e-08
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]               51   2e-07
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    51   2e-07
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    50   3e-07
ref|XP_002456461.1| hypothetical protein SORBIDRAFT_03g036763 [S...    48   4e-07

>gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indica Group]
          Length = 1546

 Score = 47.8 bits (112), Expect(2) = 9e-08
 Identities = 22/48 (45%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
 Frame = -2

Query: 363 KLCSPKTEGGLGFRDTHIFNLALLYKLLWRVVAE-KSLWSDIMLFKYH 223
           K+C PK +GG+GFRD   FNLALL K +WR+ ++  SL + ++  +Y+
Sbjct: 488 KMCMPKGKGGMGFRDLQSFNLALLAKQVWRLQSDPDSLCARVLRARYY 535



 Score = 33.1 bits (74), Expect(2) = 9e-08
 Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = -1

Query: 142 ICGVRCYKP--IWSIGDGSSVKFGTDQWV 62
           + G++C+K   IW +GDG+ +K   D W+
Sbjct: 557 LAGLQCFKQGYIWRVGDGTQIKIWEDNWI 585


>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score = 51.2 bits (121), Expect(2) = 2e-07
 Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
 Frame = -2

Query: 363 KLCSPKTEGGLGFRDTHIFNLALLYKLLWRVVAEK-SLWSDIMLFKYH 223
           K+CSPK EGGLG R     N AL+ K+ WR++ EK SLW+ ++  KYH
Sbjct: 200 KVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYH 247



 Score = 28.9 bits (63), Expect(2) = 2e-07
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 112 WSIGDGSSVKFGTDQWVKVINKPWALLD 29
           W  GDG  ++F TD+WV    KP   LD
Sbjct: 284 WIPGDGQQIRFWTDRWVS--GKPLLELD 309


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 51.2 bits (121), Expect(2) = 2e-07
 Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
 Frame = -2

Query: 363 KLCSPKTEGGLGFRDTHIFNLALLYKLLWRVVAEK-SLWSDIMLFKYH 223
           K+CSPK EGGLG R     N AL+ K+ WR++ EK SLW+ ++  KYH
Sbjct: 91  KVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYH 138



 Score = 28.9 bits (63), Expect(2) = 2e-07
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 112 WSIGDGSSVKFGTDQWVKVINKPWALLD 29
           W  GDG  ++F TD+WV    KP   LD
Sbjct: 175 WIPGDGQQIRFWTDRWVS--GKPLLELD 200


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 50.1 bits (118), Expect(2) = 3e-07
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
 Frame = -2

Query: 363  KLCSPKTEGGLGFRDTHIFNLALLYKLLWRVVAEK-SLWSDIMLFKYHKTLTL 208
            K+C PK+ GG+GFR   + N+AL  KLLW+++  K ++W  ++  KY K   L
Sbjct: 859  KICQPKSVGGVGFRKAEVTNIALQMKLLWKIMVSKDNIWVKLVTQKYLKEQNL 911



 Score = 28.9 bits (63), Expect(2) = 3e-07
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 112 WSIGDGSSVKFGTDQWV 62
           W IGDG  + F TD W+
Sbjct: 940 WLIGDGQDISFWTDNWI 956


>ref|XP_002456461.1| hypothetical protein SORBIDRAFT_03g036763 [Sorghum bicolor]
           gi|241928436|gb|EES01581.1| hypothetical protein
           SORBIDRAFT_03g036763 [Sorghum bicolor]
          Length = 218

 Score = 47.8 bits (112), Expect(2) = 4e-07
 Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
 Frame = -2

Query: 363 KLCSPKTEGGLGFRDTHIFNLALLYKLLWRVVAE-KSLWSDIMLFKYH 223
           KLC PK+ GG+GFRD H FNLA+L K + R++ + +SL + +   KY+
Sbjct: 26  KLCFPKSSGGMGFRDFHSFNLAMLAKQVCRLLCDPESLCARVFRAKYY 73



 Score = 31.2 bits (69), Expect(2) = 4e-07
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = -1

Query: 166 SGIVQSKTICGVRCYKP--IWSIGDGSSVKFGTDQWV 62
           S       + G+ C+K   IW +GDG+ +    D W+
Sbjct: 87  SSYTWQSVLAGLECFKRGYIWRVGDGTQINIWNDNWI 123