BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024106
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containi...   256   3e-66
ref|XP_002525211.1| pentatricopeptide repeat-containing protein,...   251   5e-65
ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|2...   244   7e-63
ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containi...   230   1e-58
ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   228   8e-58

>ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Vitis vinifera]
          Length = 667

 Score =  256 bits (653), Expect = 3e-66
 Identities = 122/204 (59%), Positives = 152/204 (74%)
 Frame = +3

Query: 3   NAMFIAYSLHKQHAHTXXXXXXXXXXXXXNHCLKPDNFSITCLLKALSSLFPEESSGKVV 182
           NAM I YS+H  H HT                LKPDNF+ITC+LKALS LFP+    K V
Sbjct: 104 NAMLIGYSIHNMHVHTLNLLSSLLPSYSLT--LKPDNFTITCVLKALSVLFPDSILAKEV 161

Query: 183 HGFVLRHGYECDVYVVNALVTFYAKCGQLGFARKLFDVVKERDIVSWNSMIAGYSQGGLF 362
             FVLRHG++ D++VVNAL+T+Y++C + G AR LFD + +RDIVSWNSMIAGYSQGG +
Sbjct: 162 QCFVLRHGFDSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIVSWNSMIAGYSQGGFY 221

Query: 363 EQCLNLYREMVGCEGFRPNGVTMVSVLQTCAQSNDLIFGMEVHRFIIDNGIEVDAAVCNT 542
           E C  LYR+M+   G RPNGVT+VSVLQ CAQ+NDL+FGM+VH+FII+  +E+D +  N+
Sbjct: 222 EDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIERKVEMDVSAHNS 281

Query: 543 IIGLYAKCGSLDYARELFDEMEEK 614
           +IGLYAKCGSLDYARELF+EM  K
Sbjct: 282 LIGLYAKCGSLDYARELFNEMSNK 305



 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 30/202 (14%)
 Frame = +3

Query: 99  LKPDNFSITCLLKALSSLFPEESSGKVVHGFVLRHGYECDVYVVNALVTFYAKCGQLGFA 278
           L+P+  ++  +L+A +    +   G  VH F++    E DV   N+L+  YAKCG L +A
Sbjct: 237 LRPNGVTVVSVLQACAQT-NDLVFGMKVHQFIIERKVEMDVSAHNSLIGLYAKCGSLDYA 295

Query: 279 RKLFDVVKERDIVSWNSMIAGYSQGGLFEQCLNLYREMVG-----------------CE- 404
           R+LF+ +  +D V++ S+++GY   G  ++ ++L+REM                   C  
Sbjct: 296 RELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLFREMKNPRLSTWNAVISGLVQNNCNE 355

Query: 405 ------------GFRPNGVTMVSVLQTCAQSNDLIFGMEVHRFIIDNGIEVDAAVCNTII 548
                       GFRPN VT+ S+L T +  ++L  G  +H + I NG   +  V  +II
Sbjct: 356 GILELVQEMQEFGFRPNAVTLSSILPTFSCFSNLKGGKAIHAYAIRNGYAHNIYVATSII 415

Query: 549 GLYAKCGSLDYARELFDEMEEK 614
             YAK G L  A+ +FD+ +++
Sbjct: 416 DAYAKLGFLRGAQWVFDQSKDR 437



 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
 Frame = +3

Query: 174 KVVHGFVLRHGYECDVYVVNALVTFYAKCGQLGFARKLFDVVKERDIVSWNSMIAGYSQG 353
           K +H  ++      D ++ + L+TFY+K   L  A K+FD + +++I SWN+M+ GYS  
Sbjct: 54  KQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKVFDKILDKNIFSWNAMLIGYSIH 113

Query: 354 GLFEQCLNLYREMVGCEG--FRPNGVTMVSVLQTCA-QSNDLIFGMEVHRFIIDNGIEVD 524
            +    LNL   ++       +P+  T+  VL+  +    D I   EV  F++ +G + D
Sbjct: 114 NMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSVLFPDSILAKEVQCFVLRHGFDSD 173

Query: 525 AAVCNTIIGLYAKCGSLDYARELFDEMEEK 614
             V N +I  Y++C     AR LFD M ++
Sbjct: 174 IFVVNALITYYSRCDEYGIARILFDRMHDR 203



 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 46/169 (27%), Positives = 86/169 (50%), Gaps = 1/169 (0%)
 Frame = +3

Query: 102 KPDNFSITCLLKALSSLFPEESSGKVVHGFVLRHGYECDVYVVNALVTFYAKCGQLGFAR 281
           +P+  +++ +L   S  F     GK +H + +R+GY  ++YV  +++  YAK G L  A+
Sbjct: 370 RPNAVTLSSILPTFSC-FSNLKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQ 428

Query: 282 KLFDVVKERDIVSWNSMIAGYSQGGLFEQCLNLYREMVGCEGFRPNGVTMVSVLQTCAQS 461
            +FD  K+R ++ W ++I+ YS  G     L L+ +M+   G +P+ VT  +VL  CA S
Sbjct: 429 WVFDQSKDRSLIVWTAIISAYSAHGDANAALRLFGDMLS-NGTQPDPVTFTAVLAACAHS 487

Query: 462 NDLIFGMEV-HRFIIDNGIEVDAAVCNTIIGLYAKCGSLDYARELFDEM 605
             +    ++     +  G +        ++G+ ++ G L  A E   +M
Sbjct: 488 GMVNEAWKIFDEMFLKYGFQPCVEHYACMVGVLSRAGMLSEAAEFICKM 536


>ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535508|gb|EEF37177.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score =  251 bits (642), Expect = 5e-65
 Identities = 124/205 (60%), Positives = 149/205 (72%), Gaps = 1/205 (0%)
 Frame = +3

Query: 3   NAMFIAYSLHKQHAHTXXXXXXXXXXXXXNHCLKPDNFSITCLLKALSSL-FPEESSGKV 179
           NAM I+YSLH +H                N      N SITCLLK+LSS    +   GK 
Sbjct: 94  NAMLISYSLHNRHGDALDLFSSLASSNLVN------NISITCLLKSLSSFTLSDVKLGKE 147

Query: 180 VHGFVLRHGYECDVYVVNALVTFYAKCGQLGFARKLFDVVKERDIVSWNSMIAGYSQGGL 359
           VHGFVLR G++ DV+V NAL+T+Y+KC  L  +RK+FD + +RD+VSWNSMI+GYSQGGL
Sbjct: 148 VHGFVLRTGFDADVFVENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISGYSQGGL 207

Query: 360 FEQCLNLYREMVGCEGFRPNGVTMVSVLQTCAQSNDLIFGMEVHRFIIDNGIEVDAAVCN 539
           +E C  LYREMV   GFRPNGVT+VSVLQ C Q+ DL FGMEVH+FI+DN +E+D +VCN
Sbjct: 208 YEDCKTLYREMVDFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDISVCN 267

Query: 540 TIIGLYAKCGSLDYARELFDEMEEK 614
            +IGLYAKCGSLDYARELFDEM EK
Sbjct: 268 ALIGLYAKCGSLDYARELFDEMSEK 292



 Score =  103 bits (258), Expect = 2e-20
 Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 31/202 (15%)
 Frame = +3

Query: 102 KPDNFSITCLLKALSSLFPEESSGKVVHGFVLRHGYECDVYVVNALVTFYAKCGQLGFAR 281
           +P+  ++  +L+A      + + G  VH F++ +  E D+ V NAL+  YAKCG L +AR
Sbjct: 225 RPNGVTVVSVLQACGQT-QDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSLDYAR 283

Query: 282 KLFDVVKERDIVS-------------------------------WNSMIAGYSQGGLFEQ 368
           +LFD + E+D V+                               WN++I G  Q    E 
Sbjct: 284 ELFDEMSEKDEVTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQNNRHEG 343

Query: 369 CLNLYREMVGCEGFRPNGVTMVSVLQTCAQSNDLIFGMEVHRFIIDNGIEVDAAVCNTII 548
            L+L REM    GFRPN VT+ SVL T A  + L  G E+H + I  G   +  V   II
Sbjct: 344 VLDLVREMQAL-GFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGYHRNIYVATAII 402

Query: 549 GLYAKCGSLDYARELFDEMEEK 614
            +YAK G L  A+ +FD+ +++
Sbjct: 403 DMYAKSGYLRGAQRVFDQSKDR 424



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 1/169 (0%)
 Frame = +3

Query: 102 KPDNFSITCLLKALSSLFPEESSGKVVHGFVLRHGYECDVYVVNALVTFYAKCGQLGFAR 281
           +P+  +++ +L  ++  F     GK +H + ++ GY  ++YV  A++  YAK G L  A+
Sbjct: 357 RPNAVTLSSVLSTIA-YFSSLKGGKEIHSYAIKIGYHRNIYVATAIIDMYAKSGYLRGAQ 415

Query: 282 KLFDVVKERDIVSWNSMIAGYSQGGLFEQCLNLYREMVGCEGFRPNGVTMVSVLQTCAQS 461
           ++FD  K+R +V W ++I+ Y+  G     L L+ EM+  +G +P+ VT  +VL  CA  
Sbjct: 416 RVFDQSKDRSLVIWTAIISAYAVHGDANLALGLFHEMLK-QGIQPDPVTFTAVLAACAHC 474

Query: 462 NDLIFGMEVHRFIIDN-GIEVDAAVCNTIIGLYAKCGSLDYARELFDEM 605
             +    E+   +    GI+        ++G   K   L  A+E   +M
Sbjct: 475 GMVDKAWEIFESMFKKYGIQPLVEHYACVVGALGKARRLSEAKEFVSKM 523



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 41/147 (27%), Positives = 73/147 (49%)
 Frame = +3

Query: 174 KVVHGFVLRHGYECDVYVVNALVTFYAKCGQLGFARKLFDVVKERDIVSWNSMIAGYSQG 353
           K +H  ++      + Y+ + LV  Y+K   L FAR +FD +  ++  S+N+M+  YS  
Sbjct: 44  KQLHARLILFSVTPENYLASKLVALYSKTNHLAFARYVFDQIPHKNTFSYNAMLISYSLH 103

Query: 354 GLFEQCLNLYREMVGCEGFRPNGVTMVSVLQTCAQSNDLIFGMEVHRFIIDNGIEVDAAV 533
                 L+L+  +          +T +    +    +D+  G EVH F++  G + D  V
Sbjct: 104 NRHGDALDLFSSLASSNLVNNISITCLLKSLSSFTLSDVKLGKEVHGFVLRTGFDADVFV 163

Query: 534 CNTIIGLYAKCGSLDYARELFDEMEEK 614
            N +I  Y+KC  LD +R++FD M ++
Sbjct: 164 ENALITYYSKCYDLDLSRKVFDRMTKR 190


>ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|222854472|gb|EEE92019.1|
           predicted protein [Populus trichocarpa]
          Length = 621

 Score =  244 bits (624), Expect = 7e-63
 Identities = 120/206 (58%), Positives = 152/206 (73%), Gaps = 2/206 (0%)
 Frame = +3

Query: 3   NAMFIAYSLHKQHAHTXXXXXXXXXXXXXNHCLKPDNFSITCLLKALSSLF--PEESSGK 176
           NA+ IAY+++  H  T             +  L+P+N+SITCLLK+LSSL    +   GK
Sbjct: 87  NALLIAYTMNNHHKETINLFSSLLLSSSGD--LQPNNYSITCLLKSLSSLLMVTDVCLGK 144

Query: 177 VVHGFVLRHGYECDVYVVNALVTFYAKCGQLGFARKLFDVVKERDIVSWNSMIAGYSQGG 356
            +H FVLR G   DV+V NAL++FY+KC  +GFARKLFD ++ERD+V+WNSMIAGY+Q G
Sbjct: 145 EIHCFVLRRGLVEDVFVENALISFYSKCLGVGFARKLFDKMRERDVVTWNSMIAGYAQAG 204

Query: 357 LFEQCLNLYREMVGCEGFRPNGVTMVSVLQTCAQSNDLIFGMEVHRFIIDNGIEVDAAVC 536
            F++C  LYREM    GF+PN VT++SVLQ C QS DL+FGMEVHR+I+DN +E+D  VC
Sbjct: 205 FFKECKELYREMGALPGFKPNAVTVLSVLQACMQSQDLVFGMEVHRYIVDNKVELDVLVC 264

Query: 537 NTIIGLYAKCGSLDYARELFDEMEEK 614
           N +IGLYAKCGSLDYARELFDEM EK
Sbjct: 265 NALIGLYAKCGSLDYARELFDEMSEK 290



 Score =  104 bits (259), Expect = 1e-20
 Identities = 61/178 (34%), Positives = 94/178 (52%), Gaps = 30/178 (16%)
 Frame = +3

Query: 171 GKVVHGFVLRHGYECDVYVVNALVTFYAKCGQLGFARKLFDVVKERDIVSWNSMIAGYSQ 350
           G  VH +++ +  E DV V NAL+  YAKCG L +AR+LFD + E+D V++ ++I+GY  
Sbjct: 245 GMEVHRYIVDNKVELDVLVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGYMA 304

Query: 351 GGLFEQCLNLYREMVGCE------------------------------GFRPNGVTMVSV 440
            G+ ++ + L+REM                                  GFRPN VT+ SV
Sbjct: 305 HGVVDKGMELFREMKSRVLSTWNAVISGLVQNNRHEGVVDLVREMQGLGFRPNAVTLSSV 364

Query: 441 LQTCAQSNDLIFGMEVHRFIIDNGIEVDAAVCNTIIGLYAKCGSLDYARELFDEMEEK 614
           L T +  ++L  G E+H + + NG + +  V   II  YAK G L  A+ +FD+ +E+
Sbjct: 365 LPTLSYFSNLKGGKEIHGYAVKNGYDRNIYVATAIIDTYAKLGFLFGAQYVFDQSKER 422



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 1/169 (0%)
 Frame = +3

Query: 102 KPDNFSITCLLKALSSLFPEESSGKVVHGFVLRHGYECDVYVVNALVTFYAKCGQLGFAR 281
           +P+  +++ +L  LS  F     GK +HG+ +++GY+ ++YV  A++  YAK G L  A+
Sbjct: 355 RPNAVTLSSVLPTLS-YFSNLKGGKEIHGYAVKNGYDRNIYVATAIIDTYAKLGFLFGAQ 413

Query: 282 KLFDVVKERDIVSWNSMIAGYSQGGLFEQCLNLYREMVGCEGFRPNGVTMVSVLQTCAQS 461
            +FD  KER ++ W ++I+ ++  G     L  + EM+   G +P+ VT  +VL  CA  
Sbjct: 414 YVFDQSKERSLIIWTAIISAHAAHGDANSALTFFDEMLS-NGIQPDHVTFTAVLAACAHC 472

Query: 462 NDLIFGMEVHRFIIDN-GIEVDAAVCNTIIGLYAKCGSLDYARELFDEM 605
             +    E+   +    GI+        ++G+  + G L  A E    M
Sbjct: 473 GMVDKAWEIFNSMSKKYGIQPLGEHYACMVGVLGRAGRLSQATEFISTM 521



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 40/152 (26%), Positives = 80/152 (52%), Gaps = 5/152 (3%)
 Frame = +3

Query: 174 KVVHGFVLRHGYECDVYVVNALVTFYAKCGQLGFARKLFDVVKERDIVSWNSMIAGYSQG 353
           K +H  +L      D Y+   L+  Y+K   +  AR +FD +  ++  S+N+++  Y+  
Sbjct: 37  KQLHARLLLSSSTLDNYLGARLINLYSKTKHIHHARHVFDQIPHKNTFSYNALLIAYTMN 96

Query: 354 GLFEQCLNLYREMV--GCEGFRPNGVTMVSVLQTCA---QSNDLIFGMEVHRFIIDNGIE 518
              ++ +NL+  ++       +PN  ++  +L++ +      D+  G E+H F++  G+ 
Sbjct: 97  NHHKETINLFSSLLLSSSGDLQPNNYSITCLLKSLSSLLMVTDVCLGKEIHCFVLRRGLV 156

Query: 519 VDAAVCNTIIGLYAKCGSLDYARELFDEMEEK 614
            D  V N +I  Y+KC  + +AR+LFD+M E+
Sbjct: 157 EDVFVENALISFYSKCLGVGFARKLFDKMRER 188


>ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Cucumis sativus]
          Length = 595

 Score =  230 bits (587), Expect = 1e-58
 Identities = 112/204 (54%), Positives = 147/204 (72%)
 Frame = +3

Query: 3   NAMFIAYSLHKQHAHTXXXXXXXXXXXXXNHCLKPDNFSITCLLKALSSLFPEESSGKVV 182
           NA+ I+Y+LH  H  T             +  +KPD F++TC LKAL+SLF      K V
Sbjct: 73  NALLISYTLHNMH--TDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGLAKEV 130

Query: 183 HGFVLRHGYECDVYVVNALVTFYAKCGQLGFARKLFDVVKERDIVSWNSMIAGYSQGGLF 362
           H F+LR G E D++VVNAL+TFY++C +L  AR +FD + ERDIVSWN+M+AGYSQGG +
Sbjct: 131 HSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYSQGGSY 190

Query: 363 EQCLNLYREMVGCEGFRPNGVTMVSVLQTCAQSNDLIFGMEVHRFIIDNGIEVDAAVCNT 542
           E+C  L+R M+     +PN +T VSVLQ CAQSNDLIFG+EVHRF+ ++ I++D ++ N 
Sbjct: 191 EKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMDVSLWNA 250

Query: 543 IIGLYAKCGSLDYARELFDEMEEK 614
           +IGLYAKCGSLDYARELF+EM EK
Sbjct: 251 VIGLYAKCGSLDYARELFEEMLEK 274



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 53/173 (30%), Positives = 95/173 (54%), Gaps = 1/173 (0%)
 Frame = +3

Query: 90  NHCLKPDNFSITCLLKALSSLFPEESSGKVVHGFVLRHGYECDVYVVNALVTFYAKCGQL 269
           +H  +P+  ++  +L   S  F     GK +HG+ +R+ Y+ ++YV  A++  YAKCG L
Sbjct: 335 SHGCRPNTVTLASILPVFSH-FSTLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYL 393

Query: 270 GFARKLFDVVKERDIVSWNSMIAGYSQGGLFEQCLNLYREMVGCEGFRPNGVTMVSVLQT 449
             A+ +FD +K R +++W S+I+ Y+  G     L+L+ EM+   G +P+ VT  SVL  
Sbjct: 394 HGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEML-TNGIQPDQVTFTSVLAA 452

Query: 450 CAQSNDLIFGMEVHRFII-DNGIEVDAAVCNTIIGLYAKCGSLDYARELFDEM 605
           CA S +L    ++   ++ + GI+        ++G+ ++ G L  A E   +M
Sbjct: 453 CAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVEFISKM 505



 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 57/176 (32%), Positives = 87/176 (49%), Gaps = 30/176 (17%)
 Frame = +3

Query: 171 GKVVHGFVLRHGYECDVYVVNALVTFYAKCGQLGFARKLFDVVKERDIVSWNSMIAGYSQ 350
           G  VH FV     + DV + NA++  YAKCG L +AR+LF+ + E+D +++ SMI+GY  
Sbjct: 229 GIEVHRFVNESQIKMDVSLWNAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYMV 288

Query: 351 GGLFEQCLNLYREM------------------------------VGCEGFRPNGVTMVSV 440
            G   Q ++L+RE                               +   G RPN VT+ S+
Sbjct: 289 HGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASI 348

Query: 441 LQTCAQSNDLIFGMEVHRFIIDNGIEVDAAVCNTIIGLYAKCGSLDYARELFDEME 608
           L   +  + L  G E+H + I N  + +  V   II  YAKCG L  A+ +FD+++
Sbjct: 349 LPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIK 404



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
 Frame = +3

Query: 171 GKVVHGFVLRHGYECDVYVVNALVTFYAKCGQLGFARKLFDVVKERDIVSWNSMIAGYSQ 350
           GK +H  ++      D ++ + L++FY+K G +  A  +F  +  ++I SWN+++  Y+ 
Sbjct: 22  GKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALLISYTL 81

Query: 351 GGLFEQCLNLYREMVGCEG--FRPNGVTMVSVLQTCAQ--SNDLIFGMEVHRFIIDNGIE 518
             +    L L+  +V       +P+  T+   L+  A   SN  +   EVH FI+  G+E
Sbjct: 82  HNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGL-AKEVHSFILRRGLE 140

Query: 519 VDAAVCNTIIGLYAKCGSLDYARELFDEMEEK 614
            D  V N +I  Y++C  L  AR +FD M E+
Sbjct: 141 YDIFVVNALITFYSRCDELVLARIMFDRMPER 172


>ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g37310-like [Cucumis sativus]
          Length = 635

 Score =  228 bits (580), Expect = 8e-58
 Identities = 110/204 (53%), Positives = 145/204 (71%)
 Frame = +3

Query: 3   NAMFIAYSLHKQHAHTXXXXXXXXXXXXXNHCLKPDNFSITCLLKALSSLFPEESSGKVV 182
           NA+FI+Y+LH  H  T             +  +KPD F++TC LKAL+SLF      K V
Sbjct: 73  NALFISYTLHNMH--TDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGLAKEV 130

Query: 183 HGFVLRHGYECDVYVVNALVTFYAKCGQLGFARKLFDVVKERDIVSWNSMIAGYSQGGLF 362
           H F+LR G E D++VVNAL+TFY++C +L  AR +FD + ERD VSWN+M+AGYSQGG +
Sbjct: 131 HSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYSQGGSY 190

Query: 363 EQCLNLYREMVGCEGFRPNGVTMVSVLQTCAQSNDLIFGMEVHRFIIDNGIEVDAAVCNT 542
           E+C  L+R M+     +PN +T VSVLQ CAQSNDL FG+EVHRF+ ++ I++D ++ N 
Sbjct: 191 EECKELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDVSLWNA 250

Query: 543 IIGLYAKCGSLDYARELFDEMEEK 614
           +IGLYAKCG LDYARELF+EM EK
Sbjct: 251 VIGLYAKCGILDYARELFEEMPEK 274



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 53/173 (30%), Positives = 95/173 (54%), Gaps = 1/173 (0%)
 Frame = +3

Query: 90  NHCLKPDNFSITCLLKALSSLFPEESSGKVVHGFVLRHGYECDVYVVNALVTFYAKCGQL 269
           +H  +P+  ++  +L   S  F     GK +HG+ +R+ Y+ ++YV  A++  YAKCG L
Sbjct: 335 SHGCRPNTVTLASILPVFSH-FSTLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYL 393

Query: 270 GFARKLFDVVKERDIVSWNSMIAGYSQGGLFEQCLNLYREMVGCEGFRPNGVTMVSVLQT 449
             A+ +FD +K R +++W S+I+ Y+  G     L+L+ EM+   G +P+ VT  SVL  
Sbjct: 394 HGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEML-TNGIQPDQVTFTSVLAA 452

Query: 450 CAQSNDLIFGMEVHRFII-DNGIEVDAAVCNTIIGLYAKCGSLDYARELFDEM 605
           CA S +L    ++   ++ + GI+        ++G+ ++ G L  A E   +M
Sbjct: 453 CAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVEFISKM 505



 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 30/200 (15%)
 Frame = +3

Query: 99  LKPDNFSITCLLKALSSLFPEESSGKVVHGFVLRHGYECDVYVVNALVTFYAKCGQLGFA 278
           +KP+  +   +L+A +    + + G  VH FV     + DV + NA++  YAKCG L +A
Sbjct: 206 VKPNALTAVSVLQACAQS-NDLTFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGILDYA 264

Query: 279 RKLFDVVKERDIVSWNSMIAGYSQGGLFEQCLNLYREM---------------------- 392
           R+LF+ + E+D +++ SMI+GY   G   Q ++L+RE                       
Sbjct: 265 RELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQE 324

Query: 393 --------VGCEGFRPNGVTMVSVLQTCAQSNDLIFGMEVHRFIIDNGIEVDAAVCNTII 548
                   +   G RPN VT+ S+L   +  + L  G E+H + I N  + +  V   II
Sbjct: 325 GAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVATAII 384

Query: 549 GLYAKCGSLDYARELFDEME 608
             YAKCG L  A+ +FD+++
Sbjct: 385 DSYAKCGYLHGAQLVFDQIK 404



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 4/152 (2%)
 Frame = +3

Query: 171 GKVVHGFVLRHGYECDVYVVNALVTFYAKCGQLGFARKLFDVVKERDIVSWNSMIAGYSQ 350
           GK +H  ++      D ++ + L++FY+K G +  A  +F  +  ++I SWN++   Y+ 
Sbjct: 22  GKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALFISYTL 81

Query: 351 GGLFEQCLNLYREMVGCEG--FRPNGVTMVSVLQTCAQ--SNDLIFGMEVHRFIIDNGIE 518
             +    L L+  +V       +P+  T+   L+  A   SN  +   EVH FI+  G+E
Sbjct: 82  HNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGL-AKEVHSFILRRGLE 140

Query: 519 VDAAVCNTIIGLYAKCGSLDYARELFDEMEEK 614
            D  V N +I  Y++C  L  AR +FD M E+
Sbjct: 141 YDIFVVNALITFYSRCDELVLARIMFDRMPER 172