BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024104
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513017.1| pentatricopeptide repeat-containing protein,...    72   2e-10

>ref|XP_002513017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548028|gb|EEF49520.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 349

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 45/123 (36%), Positives = 57/123 (46%), Gaps = 43/123 (34%)
 Frame = -3

Query: 797 RDFGIKPEDEHYSCVLDMHFEADEL*KPYKLVKDS------------------------- 693
           RDF + P  EHYSCV+D+   A EL + +KLV +                          
Sbjct: 227 RDFNLTPSPEHYSCVVDLFCRAGELDRAWKLVNEMLTKGHEIHSISMWGAVLSACEEHGN 286

Query: 692 ----------------ENVG--GSLSNFYARVSMWDEIQNLRELMEEWGLMKGVGCSWIG 567
                           +NVG    LSN YAR  MWDEI +LR++M++ GL K VGCSWI 
Sbjct: 287 IEFGKLAAREALKLEPQNVGIYVMLSNLYARFGMWDEIDHLRKIMKDRGLKKDVGCSWIE 346

Query: 566 IAS 558
           I S
Sbjct: 347 ITS 349