BLASTX nr result

ID: Coptis23_contig00024101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024101
         (1223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525565.1| PREDICTED: uncharacterized protein LOC100814...    72   3e-10
ref|XP_003608724.1| hypothetical protein MTR_4g101050 [Medicago ...    70   1e-09
ref|XP_003550904.1| PREDICTED: uncharacterized protein LOC100794...    69   2e-09
ref|XP_002303507.1| predicted protein [Populus trichocarpa] gi|2...    68   4e-09
emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]    68   4e-09

>ref|XP_003525565.1| PREDICTED: uncharacterized protein LOC100814359 [Glycine max]
          Length = 759

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 54/174 (31%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
 Frame = -1

Query: 1220 ALSILVITVIVNMFIQISTGVIVLFIAEHXXXXXXXXXXXXXXXXCVWETKALQ---EIV 1050
            A++ILVIT+IVN+ IQ  TGVI +F  EH                 V     ++   E+ 
Sbjct: 124  AMAILVITMIVNICIQFVTGVIYVFWVEHAVIMLLMLILLMTMTSSVISLPKMKHYFELK 183

Query: 1049 NDRNIDRIR-------FEGGSLLGLLR----KCYVCGYNSNPQFALCKTPSCATIGALSL 903
               N + I+        EG  ++ +LR    K ++  + S+PQF L ++ +C   GA  L
Sbjct: 184  YKMNEEAIKEGSKLFGEEGNQMVSILRDHLMKIWMMTHTSSPQFVLGRSVTCTASGAFCL 243

Query: 902  VCLVTLVQASFRSLVFK-VEKFCSGNSDYGWSMHXXXXXXXXXXXVGSFAPYFR 744
            +  +TL++A  RS +   +  FC+G+ DY WS             VG+ AP FR
Sbjct: 244  LSTLTLIEAMLRSYLMPWLFDFCTGDCDYKWSTILILIVQVAAVVVGTIAPAFR 297


>ref|XP_003608724.1| hypothetical protein MTR_4g101050 [Medicago truncatula]
            gi|355509779|gb|AES90921.1| hypothetical protein
            MTR_4g101050 [Medicago truncatula]
          Length = 754

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 56/176 (31%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
 Frame = -1

Query: 1220 ALSILVITVIVNMFIQISTGVIVLFIAEHXXXXXXXXXXXXXXXXCV---WETKALQEIV 1050
            A++ILVIT+IVN+ IQ  TGVI  F  EH                 V    + K   E+ 
Sbjct: 124  AMAILVITMIVNICIQFGTGVIYEFWIEHGVIMFLMVILLMIMTSSVLCLQKIKHYMELK 183

Query: 1049 NDRNIDRIRFEGGS-------------LLGLLRKCYVCGYNSNPQFALCKTPSCATIGAL 909
               N + +R E  S             L   L K ++  + S+PQF L ++ SC   GA 
Sbjct: 184  YKINEEALREESNSKEKQQEFEKVTDRLRDELMKFWMMAHTSSPQFILGRSVSCTASGAF 243

Query: 908  SLVCLVTLVQASFRS-LVFKVEKFCSGNSDYGWSMHXXXXXXXXXXXVGSFAPYFR 744
             ++  +TL++A  RS L+    KFC+G  DY WS             VG+ AP  R
Sbjct: 244  CILSTLTLIEAMLRSYLMSWTVKFCTGECDYKWSTIFILIVQVAAVGVGTIAPALR 299


>ref|XP_003550904.1| PREDICTED: uncharacterized protein LOC100794740 [Glycine max]
          Length = 760

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 16/175 (9%)
 Frame = -1

Query: 1220 ALSILVITVIVNMFIQISTGVIVLFIAEHXXXXXXXXXXXXXXXXCVWETKALQ---EIV 1050
            A++ILVIT+IVN+ IQ  TGVI LF  EH                       ++   E+ 
Sbjct: 124  AMAILVITMIVNICIQFVTGVIYLFWVEHAVIMLIMLILLMTMASSAISLPKMKHYFELK 183

Query: 1049 NDRNIDRIRFEGGSLLG------------LLRKCYVCGYNSNPQFALCKTPSCATIGALS 906
               N + ++ EG  LLG             L K ++  + S+PQF L ++ +    GA  
Sbjct: 184  YKMNEEALK-EGSKLLGEEGNQMVNRLRDQLMKIWMMAHTSSPQFVLGRSVTGTASGAFC 242

Query: 905  LVCLVTLVQASFRSLVFKVE-KFCSGNSDYGWSMHXXXXXXXXXXXVGSFAPYFR 744
            L+  +TLV+A  RS +      FC+G++DY WS+            VG+ AP FR
Sbjct: 243  LLSTLTLVEAMLRSYLMPWSFDFCTGDTDYKWSIILILIVQVAAVVVGTIAPAFR 297


>ref|XP_002303507.1| predicted protein [Populus trichocarpa] gi|222840939|gb|EEE78486.1|
            predicted protein [Populus trichocarpa]
          Length = 753

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 14/173 (8%)
 Frame = -1

Query: 1220 ALSILVITVIVNMFIQISTGVIVLFIAEHXXXXXXXXXXXXXXXXCV------------- 1080
            AL ILVITVIVN+ IQ+ TGVI L+  EH                               
Sbjct: 124  ALGILVITVIVNIGIQLGTGVIYLYWKEHVFIMFLMLILLLILSFSALTVPINNKYFQYK 183

Query: 1079 WETKALQEIVNDRNIDRIRFEGGSLLGLLRKCYVCGYNSNPQFALCKTPSCATIGALSLV 900
            +  K    +  D N +  + EG  L   L K ++  +  +PQF + ++ +C+  GA  L+
Sbjct: 184  YNKKYDMALKEDSN-ETSKREGKELKEELMKFWMMAHTCSPQFVVGRSVTCSASGAFCLL 242

Query: 899  CLVTLVQASFRS-LVFKVEKFCSGNSDYGWSMHXXXXXXXXXXXVGSFAPYFR 744
              +TL +A  RS L+ +  KFC+G S+Y WS             VG+ AP  R
Sbjct: 243  GAMTLAEAMLRSYLMPRSFKFCTGESEYKWSTIVVLITQTIAVGVGTIAPAIR 295


>emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]
          Length = 754

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 55/176 (31%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
 Frame = -1

Query: 1220 ALSILVITVIVNMFIQISTGVIVLFIAEHXXXXXXXXXXXXXXXXCV---------WETK 1068
            AL ILVIT++VN+ IQ+ TGVI ++  EH                           +E K
Sbjct: 124  ALGILVITLMVNVCIQMGTGVIYVYWKEHAVVMFIMLVLLLILSFSALTVPTTKHYFELK 183

Query: 1067 -------ALQEIVNDRNIDRIRFEGGSLLGLLRKCYVCGYNSNPQFALCKTPSCATIGAL 909
                   A++E  N+ +I   +     L   L K ++  ++S PQF + ++ +C   GAL
Sbjct: 184  YRKKYEIAVKESSNETDIPVFK----KLREDLMKYWIMAHSSXPQFVIGRSVTCTASGAL 239

Query: 908  SLVCLVTLVQASFRSLVFKVE-KFCSGNSDYGWSMHXXXXXXXXXXXVGSFAPYFR 744
             L+    LV+A  RS +     KFCSG SDY WS+            VG+  P FR
Sbjct: 240  CLLSAAILVEAWIRSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTIGPAFR 295


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