BLASTX nr result

ID: Coptis23_contig00024093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024093
         (1555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271999.1| PREDICTED: uncharacterized protein LOC100251...   210   7e-52
ref|XP_002304238.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-41
ref|XP_003529847.1| PREDICTED: uncharacterized protein LOC100812...   131   6e-28
dbj|BAB02982.1| unnamed protein product [Arabidopsis thaliana]        128   5e-27
ref|NP_001189890.1| uncharacterized protein [Arabidopsis thalian...   128   5e-27

>ref|XP_002271999.1| PREDICTED: uncharacterized protein LOC100251482 [Vitis vinifera]
          Length = 1409

 Score =  210 bits (535), Expect = 7e-52
 Identities = 164/449 (36%), Positives = 230/449 (51%), Gaps = 27/449 (6%)
 Frame = -3

Query: 1268 SRTSLGRTKNHN---VKDQAASQSHFRSIPCESGQKLKG--------------QDVCQTL 1140
            S +SL +TK+       + A  +  F   PC+SG K                 Q V QT 
Sbjct: 387  STSSLPQTKSLTDTATPNSAEPKGVFPPRPCDSGFKDPSNSGTGSVSVRADDHQAVSQTQ 446

Query: 1139 HRTSSDVTVSGGTKDRTPTLENLRAPLGQAENARSNDQTASEIHLQ-----ASLSKLDNV 975
             R+        G  + +   E L+   G  ++  + DQ ASEI  +     A  + L N 
Sbjct: 447  FRSFQGKAEKLGFTNHSALQERLKGSSGGEDHGVNKDQVASEIQSKVVSDRAEPAGLKNQ 506

Query: 974  GSAVQITQVPLTTLSGRTENTKFRNQPATQS--KASRSKVTDVVGKSEDPLVPQKQSRDF 801
            GSA  +TQ  ++  S R ++   R+Q   QS  + S  +  +V   S+D    Q  S+  
Sbjct: 507  GSA--LTQFGVS--SNRVDDAGSRDQAIAQSGFRGSLRQAVEVAPNSKDLSSSQAHSKLP 562

Query: 800  IRKLEGDSRTKDRSACQAERDIEV-DVLPSQSEWSFADGNLEGE-KRNLGFSQIKFGGLP 627
              +LEG   +K R A  +   + V D L  Q +W    G +E E KR+L  S  K    P
Sbjct: 563  SGQLEGGIGSKVREASLSVTKVSVVDELTPQPQWKSFVGEIEEEEKRDLASSDKK----P 618

Query: 626  ATFEGSGHEEMTLQQQSSSFEQSNKIPGKRGKTNSINVNGDPFVSRGKVIATAKTPDSVS 447
             T + S  + M  Q+Q S  EQ  K   KR +++S   N  P  +  +     ++  S S
Sbjct: 619  TTVDDSTLQRMKFQKQVSGPEQIKKSQVKRDESSSFYGNTKPAFAGKRGSDNQESFTSFS 678

Query: 446  TAAGEKAQKARSSKGNQELNDELQIKANDLEKLFAAHKLRVPGDQSATVRRSKPXXXXXX 267
            TA  E+ Q+ R SKGNQELNDEL++KAN+LEKLFA HKLRVPGD S + RRSKP      
Sbjct: 679  TAPIEQVQRVRQSKGNQELNDELKMKANELEKLFAEHKLRVPGDLSTSSRRSKPADMQVE 738

Query: 266  XXXXXVYRKP-MEVTPVQFPEKISLRGQFGSSGNLAEYDVDLQIGMVDNQDRGTPLKQNI 90
                  YRKP  E+   QFP+K ++    GSS NLA+++V   +  VDN++ G  L+QN+
Sbjct: 739  PVVSSQYRKPTTEIDSAQFPDK-NMMTPVGSSSNLAKFNVSPVMKTVDNENYGDTLRQNL 797

Query: 89   YEVDHLEDSRGRFYDMYMKKRNAKLREEW 3
             E+   +DSRG+FYD YM+KR+AKLREEW
Sbjct: 798  SELGFSDDSRGKFYDRYMQKRDAKLREEW 826


>ref|XP_002304238.1| predicted protein [Populus trichocarpa] gi|222841670|gb|EEE79217.1|
            predicted protein [Populus trichocarpa]
          Length = 1250

 Score =  176 bits (447), Expect = 1e-41
 Identities = 142/488 (29%), Positives = 234/488 (47%), Gaps = 49/488 (10%)
 Frame = -3

Query: 1322 RAEDGRWDAQVLTDT---IIQSRTSLGRTKNHNVKDQ-----AASQSHFRSIPCESGQKL 1167
            + +DG  D+ + T +   +  +++++    + + KDQ      AS ++   +   S  +L
Sbjct: 208  KKDDGNIDSPLCTPSSSFVSGTKSNVFPVSSDDDKDQKGFNDTASAANLVKLETRSVSRL 267

Query: 1166 KGQDVCQT----LHRTSSDVTVSGGTKDRTPTLENLRAPLGQAENARSNDQTASEIHLQA 999
            K Q   QT    +     +V + G  KD+  +L  LR+  G+ E     DQ   E  L  
Sbjct: 268  KDQGELQTHGGGIVGKDEEVNLKGNLKDQVVSLAELRSSAGRGEETGVGDQVVREDKLTG 327

Query: 998  SLSKLDNVGSAVQITQVPLTTLSGRTENTKFRNQPATQSKASRSKVTDVVG--------- 846
            +  + +  G            LS + ++  F N   T ++ +++ +   +G         
Sbjct: 328  TSDREEKTGGVE-------AQLSFQEKSRGFPNTVKTVAEKNQASLQTQIGNFAGRVGDV 380

Query: 845  ---------KSEDPLVPQKQSR-------DFIRKLEGDSRTKDRSACQAERDIEVDVLPS 714
                     +  DP + Q +SR           + EG    K +      +  + D+  S
Sbjct: 381  KFGNRIDDIEVRDPPLSQSRSRISQTHTLSLSGQFEGGFGVKGKEL--PTKGTDFDLSAS 438

Query: 713  QSEWSFADGNLEGEKRNLGFSQIKFGGLPATFEGSGHEEMTLQQQSSSFEQSNKIPGKRG 534
            Q+ W    G ++  ++     QIK   L  +           +Q SS  EQ  K+ G+R 
Sbjct: 439  QTPWKLFKGEVDHARKE-NTEQIKEEDLEVS------RMKVHKQPSSGTEQFKKLQGRRD 491

Query: 533  KT----------NSINVNGDPFVSRGKVIATAKTPDSVSTAAGEKAQKARSSKGNQELND 384
            ++          N ++  G+ F    + + T + P     +AG+ AQ+ R SKGNQELND
Sbjct: 492  ESRDESGYIHGINKLSFPGNKFSKSQESVVTLQVP-----SAGQ-AQRVRKSKGNQELND 545

Query: 383  ELQIKANDLEKLFAAHKLRVPGDQSATVRRSKPXXXXXXXXXXXVYRKP--MEVTPVQFP 210
            EL++KAN+LEKLFA HKLRVPGDQS++VRRSKP            YRKP  +E++PV+F 
Sbjct: 546  ELKMKANELEKLFAEHKLRVPGDQSSSVRRSKPAEVQAEQAESSQYRKPVAVEISPVEFQ 605

Query: 209  EKISLRGQFGSSGNLAEYDVDLQIGMVDNQDRGTPLKQNIYEVDHLEDSRGRFYDMYMKK 30
            EK ++    GSS +L ++    +  +VD+QD G+  +Q+  E+   ++SRG+FY+ YM+K
Sbjct: 606  EKKTVLEPAGSSSDLGKFSTPPR-KIVDHQDHGSSPRQSFSELSFSDNSRGKFYERYMQK 664

Query: 29   RNAKLREE 6
            R+AKLREE
Sbjct: 665  RDAKLREE 672


>ref|XP_003529847.1| PREDICTED: uncharacterized protein LOC100812963 [Glycine max]
          Length = 1249

 Score =  131 bits (329), Expect = 6e-28
 Identities = 91/242 (37%), Positives = 130/242 (53%), Gaps = 23/242 (9%)
 Frame = -3

Query: 659  GFSQIKFGGLPATFEGSGHEEMTLQQQSSSF---EQSNKIPGKR---------------- 537
            G + +KF  +    + S   E+     SSSF   E+ ++IP  +                
Sbjct: 470  GGNGLKFRDVSVRVDQSSPNEVEDSSSSSSFPNKEEDSQIPKMKYQKPLPGRNEQQISTA 529

Query: 536  -GKTNSINVNGDPFVSRGKVIATAKTPDSVSTAAGEKA-QKARSSKGNQELNDELQIKAN 363
             GK +  N +        +V+ T     + ST   E+  Q+ R SKGNQ ++DEL++KA+
Sbjct: 530  QGKRDGANESS----KMKQVLETQDNARATSTPPLEQQHQRVRQSKGNQGMHDELKMKAD 585

Query: 362  DLEKLFAAHKLRVPGDQSATVRRSKPXXXXXXXXXXXVYRKPM--EVTPVQFPEKISLRG 189
            +LEKLFA HKLRVPGDQS +VRR +P            YR+    E TP Q P + ++  
Sbjct: 586  ELEKLFAEHKLRVPGDQSGSVRRVEPADVHVEQSQ---YRRGGVGESTP-QLPSRSNVIE 641

Query: 188  QFGSSGNLAEYDVDLQIGMVDNQDRGTPLKQNIYEVDHLEDSRGRFYDMYMKKRNAKLRE 9
               SS NL  +D  L   MVD+Q+ G  L+QN  +++  EDSRG+FY+ YMKKRNAKL+E
Sbjct: 642  VAASSSNLTSFDAKLVTKMVDSQNYGDALRQNFSDLNLSEDSRGKFYEKYMKKRNAKLQE 701

Query: 8    EW 3
            +W
Sbjct: 702  DW 703


>dbj|BAB02982.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1040

 Score =  128 bits (321), Expect = 5e-27
 Identities = 73/194 (37%), Positives = 114/194 (58%), Gaps = 2/194 (1%)
 Frame = -3

Query: 578 SSSFEQSNKIPGKRGKTNSINVNGDPFVSRGKVIATAKTPDSVSTAAGEKAQKARSSKGN 399
           S   EQ  +   +R +  S  VN  P  +   V   +++   +  +  E+ Q+AR SKG+
Sbjct: 373 SGGSEQMKRPHSRRPEMGSAAVNTKPSAAINSVSDISESDTLIQVSPTEQVQRARPSKGS 432

Query: 398 QELNDELQIKANDLEKLFAAHKLRVPGDQSATVRRSKPXXXXXXXXXXXVYRKPM--EVT 225
           QELNDEL++KAN+LEKLFA H LRVPGDQS++VRR KP             R+P+  +++
Sbjct: 433 QELNDELKVKANELEKLFAEHMLRVPGDQSSSVRRGKP-GKPSEQAVTSQLRRPVAQDLS 491

Query: 224 PVQFPEKISLRGQFGSSGNLAEYDVDLQIGMVDNQDRGTPLKQNIYEVDHLEDSRGRFYD 45
            VQ  ++ +L     +S +  ++     + MV  +D G   +QN  E+   ++SRG+FY+
Sbjct: 492 SVQISDQKTLAMPTLTSNDEDKFKTPPTMKMVVTKDYGDTTRQNFPEISFSDNSRGKFYE 551

Query: 44  MYMKKRNAKLREEW 3
            YM+KR+AKL+E+W
Sbjct: 552 QYMQKRDAKLKEDW 565


>ref|NP_001189890.1| uncharacterized protein [Arabidopsis thaliana]
            gi|332641961|gb|AEE75482.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 1262

 Score =  128 bits (321), Expect = 5e-27
 Identities = 73/194 (37%), Positives = 114/194 (58%), Gaps = 2/194 (1%)
 Frame = -3

Query: 578  SSSFEQSNKIPGKRGKTNSINVNGDPFVSRGKVIATAKTPDSVSTAAGEKAQKARSSKGN 399
            S   EQ  +   +R +  S  VN  P  +   V   +++   +  +  E+ Q+AR SKG+
Sbjct: 569  SGGSEQMKRPHSRRPEMGSAAVNTKPSAAINSVSDISESDTLIQVSPTEQVQRARPSKGS 628

Query: 398  QELNDELQIKANDLEKLFAAHKLRVPGDQSATVRRSKPXXXXXXXXXXXVYRKPM--EVT 225
            QELNDEL++KAN+LEKLFA H LRVPGDQS++VRR KP             R+P+  +++
Sbjct: 629  QELNDELKVKANELEKLFAEHMLRVPGDQSSSVRRGKP-GKPSEQAVTSQLRRPVAQDLS 687

Query: 224  PVQFPEKISLRGQFGSSGNLAEYDVDLQIGMVDNQDRGTPLKQNIYEVDHLEDSRGRFYD 45
             VQ  ++ +L     +S +  ++     + MV  +D G   +QN  E+   ++SRG+FY+
Sbjct: 688  SVQISDQKTLAMPTLTSNDEDKFKTPPTMKMVVTKDYGDTTRQNFPEISFSDNSRGKFYE 747

Query: 44   MYMKKRNAKLREEW 3
             YM+KR+AKL+E+W
Sbjct: 748  QYMQKRDAKLKEDW 761


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