BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024089
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat...    92   3e-17
ref|XP_002515231.1| pentatricopeptide repeat-containing protein,...    91   7e-17
ref|XP_003536858.1| PREDICTED: putative pentatricopeptide repeat...    87   1e-15
ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat...    87   1e-15

>ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|222852942|gb|EEE90489.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/69 (68%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
 Frame = +2

Query: 2   GKLEEAENCFLQMVEKGHKPSNVSFRRIKVLMELANRHEALKILSKKMGIFGPIVQERDR 181
           GKL EAE CFLQMVEKGHKPSNVSFRRIKVLMELAN+H+A++ LS+KM IFG  ++  + 
Sbjct: 435 GKLVEAEKCFLQMVEKGHKPSNVSFRRIKVLMELANKHDAIRNLSEKMAIFGSSIRAPEG 494

Query: 182 I-EREAS*P 205
           + E+E S P
Sbjct: 495 MDEKECSDP 503


>ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Vitis vinifera]
          Length = 526

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/62 (70%), Positives = 52/62 (83%)
 Frame = +2

Query: 2   GKLEEAENCFLQMVEKGHKPSNVSFRRIKVLMELANRHEALKILSKKMGIFGPIVQERDR 181
           GKL E E C LQM+EKGHKPSNVSFRRIKVLMELAN+HEAL+ L++KM +FGP  Q ++R
Sbjct: 452 GKLVEVEKCCLQMIEKGHKPSNVSFRRIKVLMELANKHEALQNLTEKMAMFGPSTQVQER 511

Query: 182 IE 187
            E
Sbjct: 512 AE 513


>ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545711|gb|EEF47215.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 505

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/62 (72%), Positives = 50/62 (80%)
 Frame = +2

Query: 2   GKLEEAENCFLQMVEKGHKPSNVSFRRIKVLMELANRHEALKILSKKMGIFGPIVQERDR 181
           GKL EAE CFLQM+EKGHKPSNVSFRRIKVLMEL N+H+AL  L KKM IFG  +Q  +R
Sbjct: 431 GKLVEAEKCFLQMIEKGHKPSNVSFRRIKVLMELVNKHDALLNLQKKMAIFGSSIQLPER 490

Query: 182 IE 187
            E
Sbjct: 491 EE 492


>ref|XP_003536858.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Glycine max]
          Length = 279

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/58 (75%), Positives = 50/58 (86%)
 Frame = +2

Query: 2   GKLEEAENCFLQMVEKGHKPSNVSFRRIKVLMELANRHEALKILSKKMGIFGPIVQER 175
           GKLEEAE CFL+MVEKG KPS+VSFRRIKVLMELANRHEAL+ L++KM IF   +Q R
Sbjct: 222 GKLEEAEKCFLEMVEKGQKPSHVSFRRIKVLMELANRHEALQSLTQKMAIFRRPLQVR 279


>ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Glycine max]
          Length = 500

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/56 (76%), Positives = 49/56 (87%)
 Frame = +2

Query: 2   GKLEEAENCFLQMVEKGHKPSNVSFRRIKVLMELANRHEALKILSKKMGIFGPIVQ 169
           GKLEEAE CFL+MVEKG KPS+VSFRRIKVLMELANRHEAL+ L +KM +FG  +Q
Sbjct: 426 GKLEEAEKCFLEMVEKGQKPSHVSFRRIKVLMELANRHEALQSLMQKMAMFGRPLQ 481