BLASTX nr result

ID: Coptis23_contig00024078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024078
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136180.1| PREDICTED: metal tolerance protein C1-like [...    58   7e-07
ref|XP_002321323.1| metal tolerance protein [Populus trichocarpa...    57   1e-06

>ref|XP_004136180.1| PREDICTED: metal tolerance protein C1-like [Cucumis sativus]
           gi|449524166|ref|XP_004169094.1| PREDICTED: metal
           tolerance protein C1-like [Cucumis sativus]
          Length = 500

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = -3

Query: 143 KDVEHIVSKILSSKFPEVISVEHITHHSLQGQLLLQIEVSMPHDMLI 3
           +++E  VS I+ SKFPE + VE IT H LQG++LLQIEVSMP D+LI
Sbjct: 415 ENIEATVSDIVQSKFPENMMVERITPHLLQGKILLQIEVSMPPDLLI 461


>ref|XP_002321323.1| metal tolerance protein [Populus trichocarpa]
           gi|222862096|gb|EEE99638.1| metal tolerance protein
           [Populus trichocarpa]
          Length = 453

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/56 (51%), Positives = 37/56 (66%)
 Frame = -3

Query: 170 RNLGFNSQQKDVEHIVSKILSSKFPEVISVEHITHHSLQGQLLLQIEVSMPHDMLI 3
           +N   +   KD+E IVS + SSK PE I VE IT H +QG +LLQIE+SM   +LI
Sbjct: 366 QNKKISLDDKDIELIVSDVFSSKIPEKIEVERITRHLMQGNILLQIEISMRPSILI 421


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