BLASTX nr result

ID: Coptis23_contig00024072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024072
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus commu...   101   7e-20
emb|CAN69124.1| hypothetical protein VITISV_026287 [Vitis vinifera]   100   1e-19
emb|CBI27664.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like pr...    94   1e-17
ref|XP_002267224.2| PREDICTED: LOW QUALITY PROTEIN: promoter-bin...    79   4e-13

>ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus communis]
           gi|223545956|gb|EEF47459.1| LIGULELESS1 protein,
           putative [Ricinus communis]
          Length = 483

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/95 (48%), Positives = 67/95 (70%)
 Frame = +1

Query: 1   ALSLLSNNPWRSGNPEPTSLDQLMNANHTSMAHPAMHAVPQGWPLGSAEYWQAEQQPVDT 180
           ALSLLS N W S  P+  S ++    +HT M    +HAVPQG PL S++YW+AEQ   ++
Sbjct: 389 ALSLLSTNSWGSCEPKSFSHERPAQLSHTGMPQSVLHAVPQGLPLTSSDYWRAEQHITNS 448

Query: 181 QVHSMASQISSGNHFQEFQLFKAPFESGYYSSQMN 285
           +VH++ SQ  S ++FQEFQL +AP+++ +YSSQ+N
Sbjct: 449 RVHTLTSQNDSSSYFQEFQLLRAPYDNDFYSSQLN 483


>emb|CAN69124.1| hypothetical protein VITISV_026287 [Vitis vinifera]
          Length = 1048

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/96 (52%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
 Frame = +1

Query: 1    ALSLLSNNPWRSGNPEPTSLDQLMNANHTSMAHPAMHAVPQGWPLGSAEYWQAEQQPVDT 180
            ALSLLS N W   +P PTSLDQLM+ N  SMA P  HA P  W L S+E    +Q P +T
Sbjct: 953  ALSLLSTNSWGLNDPGPTSLDQLMHVNQXSMAQPTXHAEPHNWALASSENMHVQQTPSET 1012

Query: 181  QVHSMASQISSGNHFQEFQLFKAPFESG-YYSSQMN 285
            + HS+    +  + FQEFQLFKAP+ESG +Y +Q+N
Sbjct: 1013 RGHSLDLHNNGSSMFQEFQLFKAPYESGCFYPNQIN 1048


>emb|CBI27664.3| unnamed protein product [Vitis vinifera]
          Length = 418

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/95 (48%), Positives = 59/95 (62%)
 Frame = +1

Query: 1   ALSLLSNNPWRSGNPEPTSLDQLMNANHTSMAHPAMHAVPQGWPLGSAEYWQAEQQPVDT 180
           ALSLLS N W S   +P   D  M+ N TSM    MHAV QG    ++E+W+ E    D+
Sbjct: 324 ALSLLSTNSWGSCETQPIPSDHPMHVNQTSMPQSIMHAVSQGMLHSTSEHWRTELPSTDS 383

Query: 181 QVHSMASQISSGNHFQEFQLFKAPFESGYYSSQMN 285
           +VH + SQ     HFQEF+LFKAP+ESG+ S Q+N
Sbjct: 384 RVHILPSQGDGNTHFQEFKLFKAPYESGFSSGQLN 418


>ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like protein 12-like [Vitis
           vinifera]
          Length = 477

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/95 (48%), Positives = 59/95 (62%)
 Frame = +1

Query: 1   ALSLLSNNPWRSGNPEPTSLDQLMNANHTSMAHPAMHAVPQGWPLGSAEYWQAEQQPVDT 180
           ALSLLS N W S   +P   D  M+ N TSM    MHAV QG    ++E+W+ E    D+
Sbjct: 383 ALSLLSTNSWGSCETQPIPSDHPMHVNQTSMPQSIMHAVSQGMLHSTSEHWRTELPSTDS 442

Query: 181 QVHSMASQISSGNHFQEFQLFKAPFESGYYSSQMN 285
           +VH + SQ     HFQEF+LFKAP+ESG+ S Q+N
Sbjct: 443 RVHILPSQGDGNTHFQEFKLFKAPYESGFSSGQLN 477


>ref|XP_002267224.2| PREDICTED: LOW QUALITY PROTEIN: promoter-binding protein SPL10
           [Vitis vinifera]
          Length = 506

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/82 (47%), Positives = 48/82 (58%)
 Frame = +1

Query: 1   ALSLLSNNPWRSGNPEPTSLDQLMNANHTSMAHPAMHAVPQGWPLGSAEYWQAEQQPVDT 180
           ALSLLS N W   +P PTSLDQLM+ N TSMA P MHA P  W L S+E    +Q P +T
Sbjct: 376 ALSLLSTNSWGLNDPGPTSLDQLMHVNQTSMAQPTMHAEPHNWALASSENMHVQQTPSET 435

Query: 181 QVHSMASQISSGNHFQEFQLFK 246
           + HS+    +    F+ F   K
Sbjct: 436 RGHSLDLHNNEAACFKSFNYLK 457


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