BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024069
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]      236   4e-60
ref|NP_001241288.1| uncharacterized protein LOC100794560 [Glycin...   235   7e-60
ref|XP_002302112.1| predicted protein [Populus trichocarpa] gi|2...   234   1e-59
ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloro...   231   2e-58
ref|XP_003536534.1| PREDICTED: LOW QUALITY PROTEIN: ribosome-rec...   229   5e-58

>gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 286

 Score =  236 bits (602), Expect = 4e-60
 Identities = 122/153 (79%), Positives = 135/153 (88%)
 Frame = -2

Query: 766 NFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISSPDASSLLIQPYDKSSLKSIEKAI 587
           NFN+VRTGRANPSMLD++EVEYYGTPVSLKSIAQIS+PDASSLL+QPYDKSSLK+IEKAI
Sbjct: 124 NFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAI 183

Query: 586 VSSDLSLNPNNDGEVIRLSIPQLTSDRRKELSKVVAKQAEEGKVAIRNIRRDAIXXXXXX 407
           VSSDL L PNNDGEVIR+SIPQLTS+RRKELSK+VAK AEEGKVA+RNIRRDA+      
Sbjct: 184 VSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVALRNIRRDALKAYEKL 243

Query: 406 XXXXXXXEDIVKDLSGDLQKLTDEYMKKIDSIF 308
                  ED VKDLS DLQKLTDEYMKK+D+IF
Sbjct: 244 EKEKKLSEDNVKDLSSDLQKLTDEYMKKLDNIF 276


>ref|NP_001241288.1| uncharacterized protein LOC100794560 [Glycine max]
           gi|255638439|gb|ACU19529.1| unknown [Glycine max]
          Length = 261

 Score =  235 bits (600), Expect = 7e-60
 Identities = 119/153 (77%), Positives = 136/153 (88%)
 Frame = -2

Query: 766 NFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISSPDASSLLIQPYDKSSLKSIEKAI 587
           NF+++RTGRANPSMLD+++VEYYG+PVSLKSIAQIS+PDASSLL+QPYDKSSLK+IEKAI
Sbjct: 99  NFSSIRTGRANPSMLDKIQVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAI 158

Query: 586 VSSDLSLNPNNDGEVIRLSIPQLTSDRRKELSKVVAKQAEEGKVAIRNIRRDAIXXXXXX 407
           VSSDL + PNNDGE+IRLSIPQLTSDRRKELSK+VAKQAEEGKVA+RNIRRDA+      
Sbjct: 159 VSSDLGMTPNNDGELIRLSIPQLTSDRRKELSKIVAKQAEEGKVALRNIRRDALKAYDKL 218

Query: 406 XXXXXXXEDIVKDLSGDLQKLTDEYMKKIDSIF 308
                  ED VKDLS DLQKLTDEYMKK+D+IF
Sbjct: 219 EKEKKLSEDNVKDLSSDLQKLTDEYMKKVDTIF 251


>ref|XP_002302112.1| predicted protein [Populus trichocarpa] gi|222843838|gb|EEE81385.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  234 bits (598), Expect = 1e-59
 Identities = 121/153 (79%), Positives = 135/153 (88%)
 Frame = -2

Query: 766 NFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISSPDASSLLIQPYDKSSLKSIEKAI 587
           NFN+VRTGRANPSMLD++EVEYYGTPVSLKSIAQIS+PDASSLL+QPYDKSSLK+IEKAI
Sbjct: 124 NFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAI 183

Query: 586 VSSDLSLNPNNDGEVIRLSIPQLTSDRRKELSKVVAKQAEEGKVAIRNIRRDAIXXXXXX 407
           VSSDL L PNNDGEVIR+SIPQLTS+RRKELSK+VAK AEEGKVA+RNIRRDA+      
Sbjct: 184 VSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVALRNIRRDALKAYEKL 243

Query: 406 XXXXXXXEDIVKDLSGDLQKLTDEYMKKIDSIF 308
                  ED VKDLS DLQKLTDEYMKK+++IF
Sbjct: 244 EKEKKLSEDNVKDLSSDLQKLTDEYMKKLENIF 276


>ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score =  231 bits (588), Expect = 2e-58
 Identities = 116/153 (75%), Positives = 135/153 (88%)
 Frame = -2

Query: 766 NFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISSPDASSLLIQPYDKSSLKSIEKAI 587
           NFN++RTGR+NP+MLD++EVEYYG+PVSLKSIAQIS+PDASSLL+QPYDKSSLKSIEKAI
Sbjct: 116 NFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAI 175

Query: 586 VSSDLSLNPNNDGEVIRLSIPQLTSDRRKELSKVVAKQAEEGKVAIRNIRRDAIXXXXXX 407
           V+SDL + PNNDGEVIRL++PQLTS+RRKELSKVVAKQAEEGKVA+RNIRRDA+      
Sbjct: 176 VNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKL 235

Query: 406 XXXXXXXEDIVKDLSGDLQKLTDEYMKKIDSIF 308
                  ED VKDLS DLQKLTD+YMKKID ++
Sbjct: 236 EKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLY 268


>ref|XP_003536534.1| PREDICTED: LOW QUALITY PROTEIN: ribosome-recycling factor,
           chloroplastic-like [Glycine max]
          Length = 256

 Score =  229 bits (584), Expect = 5e-58
 Identities = 116/153 (75%), Positives = 133/153 (86%)
 Frame = -2

Query: 766 NFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISSPDASSLLIQPYDKSSLKSIEKAI 587
           NF+++RTGRANP+MLD++EVEYYG+PVSLKSIAQIS+PDASSLL+QPYDKSSLK+IEK I
Sbjct: 94  NFSSIRTGRANPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKTI 153

Query: 586 VSSDLSLNPNNDGEVIRLSIPQLTSDRRKELSKVVAKQAEEGKVAIRNIRRDAIXXXXXX 407
           VSSDL + PNNDGE I+L IPQLTSDRRKELSK+VAKQAEEGKVA+RNIRRDA+      
Sbjct: 154 VSSDLGMTPNNDGESIQLRIPQLTSDRRKELSKIVAKQAEEGKVALRNIRRDALKAYDKL 213

Query: 406 XXXXXXXEDIVKDLSGDLQKLTDEYMKKIDSIF 308
                  ED VKDLS DLQKLTDEYMKK+D+IF
Sbjct: 214 EKEKKLSEDNVKDLSSDLQKLTDEYMKKVDTIF 246