BLASTX nr result

ID: Coptis23_contig00024039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024039
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328480.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|XP_002282176.1| PREDICTED: UPF0235 protein C15orf40 homolog ...   142   3e-32
ref|NP_001237633.1| uncharacterized protein LOC100527290 [Glycin...   139   5e-31
ref|NP_001238533.1| uncharacterized protein LOC100499954 [Glycin...   138   6e-31
ref|XP_004151587.1| PREDICTED: UPF0235 protein C15orf40 homolog ...   137   1e-30

>ref|XP_002328480.1| predicted protein [Populus trichocarpa] gi|222838195|gb|EEE76560.1|
           predicted protein [Populus trichocarpa]
          Length = 131

 Score =  145 bits (367), Expect = 4e-33
 Identities = 72/109 (66%), Positives = 87/109 (79%)
 Frame = +2

Query: 71  SSTSPASKFPASLRHIPPSSVAITVHAKPGSKIATITDVNDDAVGVQIDAPPKDGEANAA 250
           ++ SP + FP+ +R +PPSSVAIT+HAKPGSK A+ITD++D+AVGVQIDAP KDGEANAA
Sbjct: 22  TAPSPQNNFPSCIRAVPPSSVAITIHAKPGSKSASITDLSDEAVGVQIDAPAKDGEANAA 81

Query: 251 LVDYISSVIGVKKRQVTIGSGSKSRDKXXXXXXXXXXXXFDALTKVSSC 397
           L+DYISSV+GVK+RQV+IGSGSKSRDK            FDAL K S C
Sbjct: 82  LLDYISSVLGVKRRQVSIGSGSKSRDKVVIVEEVTLQNVFDALEKASKC 130


>ref|XP_002282176.1| PREDICTED: UPF0235 protein C15orf40 homolog [Vitis vinifera]
           gi|147866968|emb|CAN83055.1| hypothetical protein
           VITISV_009894 [Vitis vinifera]
          Length = 128

 Score =  142 bits (359), Expect = 3e-32
 Identities = 72/110 (65%), Positives = 86/110 (78%)
 Frame = +2

Query: 71  SSTSPASKFPASLRHIPPSSVAITVHAKPGSKIATITDVNDDAVGVQIDAPPKDGEANAA 250
           SS S  S FP+ +R +PPSSV+ITVHAKPGSK+++ITD +D+A+GVQIDAP KDGEANAA
Sbjct: 19  SSDSVNSSFPSCIRFVPPSSVSITVHAKPGSKVSSITDFDDEALGVQIDAPAKDGEANAA 78

Query: 251 LVDYISSVIGVKKRQVTIGSGSKSRDKXXXXXXXXXXXXFDALTKVSSCH 400
           L+DYISSV+GVK+RQV+I SGSKSRDK            FDAL KVS  H
Sbjct: 79  LLDYISSVVGVKRRQVSISSGSKSRDKVVIVEEVTLQGVFDALDKVSKSH 128


>ref|NP_001237633.1| uncharacterized protein LOC100527290 [Glycine max]
           gi|255632017|gb|ACU16361.1| unknown [Glycine max]
          Length = 126

 Score =  139 bits (349), Expect = 5e-31
 Identities = 69/108 (63%), Positives = 87/108 (80%), Gaps = 3/108 (2%)
 Frame = +2

Query: 77  TSPASK---FPASLRHIPPSSVAITVHAKPGSKIATITDVNDDAVGVQIDAPPKDGEANA 247
           T+P+ K   FP+ +R +PPSSVAIT+HAKPGSK A++TD++D+AVGVQIDAP +DGEANA
Sbjct: 16  TTPSEKPNDFPSCIRSVPPSSVAITIHAKPGSKSASVTDISDEAVGVQIDAPARDGEANA 75

Query: 248 ALVDYISSVIGVKKRQVTIGSGSKSRDKXXXXXXXXXXXXFDALTKVS 391
           AL+DYISSV+GVK+RQV++G+GSKSRDK            FDAL KVS
Sbjct: 76  ALLDYISSVLGVKRRQVSLGTGSKSRDKTVIVEDVTQQYVFDALDKVS 123


>ref|NP_001238533.1| uncharacterized protein LOC100499954 [Glycine max]
           gi|255627953|gb|ACU14321.1| unknown [Glycine max]
          Length = 126

 Score =  138 bits (348), Expect = 6e-31
 Identities = 69/111 (62%), Positives = 88/111 (79%), Gaps = 3/111 (2%)
 Frame = +2

Query: 77  TSPASK---FPASLRHIPPSSVAITVHAKPGSKIATITDVNDDAVGVQIDAPPKDGEANA 247
           T+P+ K   FP+ ++ +PPSSVAIT+HAKPG+K A+ITD++D+AVGVQIDAP +DGEANA
Sbjct: 16  TTPSEKPNDFPSCIQSVPPSSVAITIHAKPGAKSASITDISDEAVGVQIDAPARDGEANA 75

Query: 248 ALVDYISSVIGVKKRQVTIGSGSKSRDKXXXXXXXXXXXXFDALTKVSSCH 400
           AL+DYISSV+GVK+RQV++G+GSKSRDK            FDAL KVS  H
Sbjct: 76  ALLDYISSVLGVKRRQVSLGTGSKSRDKTVIVEDVTQQYVFDALDKVSKQH 126


>ref|XP_004151587.1| PREDICTED: UPF0235 protein C15orf40 homolog [Cucumis sativus]
           gi|449513315|ref|XP_004164293.1| PREDICTED: UPF0235
           protein C15orf40 homolog [Cucumis sativus]
          Length = 156

 Score =  137 bits (345), Expect = 1e-30
 Identities = 68/111 (61%), Positives = 85/111 (76%)
 Frame = +2

Query: 65  NVSSTSPASKFPASLRHIPPSSVAITVHAKPGSKIATITDVNDDAVGVQIDAPPKDGEAN 244
           ++ S+  ++ +P+ LR + PSSVAIT+HAKPGSKIA+ITD  DDA+GVQIDAP KDGEAN
Sbjct: 45  SIQSSVKSNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEAN 104

Query: 245 AALVDYISSVIGVKKRQVTIGSGSKSRDKXXXXXXXXXXXXFDALTKVSSC 397
           AAL+DY+SSV+GVK+RQV+IGSGSKSR K            FDAL K  +C
Sbjct: 105 AALLDYMSSVLGVKRRQVSIGSGSKSRGKVVIVEDVSLQSVFDALNKALTC 155


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