BLASTX nr result

ID: Coptis23_contig00024031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024031
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...   181   5e-44
emb|CBI35661.3| unnamed protein product [Vitis vinifera]              181   5e-44
gb|ABA93957.1| NLI interacting factor-like phosphatase family pr...   181   9e-44
gb|EEE52187.1| hypothetical protein OsJ_34058 [Oryza sativa Japo...   181   9e-44
gb|EEC68257.1| hypothetical protein OsI_36281 [Oryza sativa Indi...   181   9e-44

>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Vitis vinifera]
          Length = 1238

 Score =  181 bits (460), Expect = 5e-44
 Identities = 91/154 (59%), Positives = 109/154 (70%)
 Frame = -3

Query: 463  LKGKEGRDCKKKQRHLFHLSEADMWIKLRPGIWNFLEKASKLFELHLYTMRNKKFATGIA 284
            L+ KE +D +K QRHLF      MW KLRPGIWNFLEKASKL+ELHLYTM NK +AT +A
Sbjct: 952  LRKKEEQDREKSQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMA 1011

Query: 283  NLLDPSGALFAGRVISGGDDHDIMGCNNELAKFKNLDDVKGMASAILILDDSEDDWPHMK 104
             +LDP G LFAGRVIS GDD D++  +  + K K+L+ V GM SA++I+DDS   WPH K
Sbjct: 1012 KVLDPKGVLFAGRVISKGDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNK 1071

Query: 103  RNLIVVERYIYFPGKVRHSGHKPQQLLKLDRDER 2
             NLIVVERY YFP   R  G     LL++D DER
Sbjct: 1072 LNLIVVERYTYFPCSRRQFGLPGPSLLEIDHDER 1105


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score =  181 bits (460), Expect = 5e-44
 Identities = 91/154 (59%), Positives = 109/154 (70%)
 Frame = -3

Query: 463  LKGKEGRDCKKKQRHLFHLSEADMWIKLRPGIWNFLEKASKLFELHLYTMRNKKFATGIA 284
            L+ KE +D +K QRHLF      MW KLRPGIWNFLEKASKL+ELHLYTM NK +AT +A
Sbjct: 898  LRKKEEQDREKSQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMA 957

Query: 283  NLLDPSGALFAGRVISGGDDHDIMGCNNELAKFKNLDDVKGMASAILILDDSEDDWPHMK 104
             +LDP G LFAGRVIS GDD D++  +  + K K+L+ V GM SA++I+DDS   WPH K
Sbjct: 958  KVLDPKGVLFAGRVISKGDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNK 1017

Query: 103  RNLIVVERYIYFPGKVRHSGHKPQQLLKLDRDER 2
             NLIVVERY YFP   R  G     LL++D DER
Sbjct: 1018 LNLIVVERYTYFPCSRRQFGLPGPSLLEIDHDER 1051


>gb|ABA93957.1| NLI interacting factor-like phosphatase family protein, expressed
            [Oryza sativa Japonica Group]
          Length = 1272

 Score =  181 bits (458), Expect = 9e-44
 Identities = 91/154 (59%), Positives = 110/154 (71%)
 Frame = -3

Query: 463  LKGKEGRDCKKKQRHLFHLSEADMWIKLRPGIWNFLEKASKLFELHLYTMRNKKFATGIA 284
            L+ KE +D ++ +RHLF  +   MW KLRPGIWNFLEKASKL+ELHLYTM NK +AT +A
Sbjct: 987  LRKKEEQDRERAERHLFCFNHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKVYATEMA 1046

Query: 283  NLLDPSGALFAGRVISGGDDHDIMGCNNELAKFKNLDDVKGMASAILILDDSEDDWPHMK 104
             +LDP+G LFAGRVIS GDD D    +  + K K+LD V GM SA++I+DDS   WPH K
Sbjct: 1047 KVLDPTGTLFAGRVISRGDDGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNK 1106

Query: 103  RNLIVVERYIYFPGKVRHSGHKPQQLLKLDRDER 2
             NLIVVERY YFP   R  G     LL++DRDER
Sbjct: 1107 HNLIVVERYTYFPCSRRQFGLPGPSLLEIDRDER 1140


>gb|EEE52187.1| hypothetical protein OsJ_34058 [Oryza sativa Japonica Group]
          Length = 1267

 Score =  181 bits (458), Expect = 9e-44
 Identities = 91/154 (59%), Positives = 110/154 (71%)
 Frame = -3

Query: 463  LKGKEGRDCKKKQRHLFHLSEADMWIKLRPGIWNFLEKASKLFELHLYTMRNKKFATGIA 284
            L+ KE +D ++ +RHLF  +   MW KLRPGIWNFLEKASKL+ELHLYTM NK +AT +A
Sbjct: 982  LRKKEEQDRERAERHLFCFNHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKVYATEMA 1041

Query: 283  NLLDPSGALFAGRVISGGDDHDIMGCNNELAKFKNLDDVKGMASAILILDDSEDDWPHMK 104
             +LDP+G LFAGRVIS GDD D    +  + K K+LD V GM SA++I+DDS   WPH K
Sbjct: 1042 KVLDPTGTLFAGRVISRGDDGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNK 1101

Query: 103  RNLIVVERYIYFPGKVRHSGHKPQQLLKLDRDER 2
             NLIVVERY YFP   R  G     LL++DRDER
Sbjct: 1102 HNLIVVERYTYFPCSRRQFGLPGPSLLEIDRDER 1135


>gb|EEC68257.1| hypothetical protein OsI_36281 [Oryza sativa Indica Group]
          Length = 1255

 Score =  181 bits (458), Expect = 9e-44
 Identities = 91/154 (59%), Positives = 110/154 (71%)
 Frame = -3

Query: 463  LKGKEGRDCKKKQRHLFHLSEADMWIKLRPGIWNFLEKASKLFELHLYTMRNKKFATGIA 284
            L+ KE +D ++ +RHLF  +   MW KLRPGIWNFLEKASKL+ELHLYTM NK +AT +A
Sbjct: 970  LRKKEEQDRERAERHLFCFNHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKVYATEMA 1029

Query: 283  NLLDPSGALFAGRVISGGDDHDIMGCNNELAKFKNLDDVKGMASAILILDDSEDDWPHMK 104
             +LDP+G LFAGRVIS GDD D    +  + K K+LD V GM SA++I+DDS   WPH K
Sbjct: 1030 KVLDPTGTLFAGRVISRGDDGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNK 1089

Query: 103  RNLIVVERYIYFPGKVRHSGHKPQQLLKLDRDER 2
             NLIVVERY YFP   R  G     LL++DRDER
Sbjct: 1090 HNLIVVERYTYFPCSRRQFGLPGPSLLEIDRDER 1123


Top