BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024024
         (1483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV58896.1| farnesyl diphosphate synthase [Centella asiatica]      551   e-154
gb|AAY87903.1| farnesyl diphosphate synthase [Panax ginseng]          549   e-154
gb|ADV03080.1| farnesyl diphosphate synthase [Bacopa monnieri]        549   e-154
gb|ABK95166.1| unknown [Populus trichocarpa]                          549   e-154
ref|XP_002272641.1| PREDICTED: farnesyl pyrophosphate synthase 1...   549   e-154

>gb|AAV58896.1| farnesyl diphosphate synthase [Centella asiatica]
          Length = 342

 Score =  551 bits (1419), Expect = e-154
 Identities = 265/340 (77%), Positives = 299/340 (87%)
 Frame = +3

Query: 195  SSTKSDFLKVYSVLKSELLQDPSFEFTDHSRQWVDRMLDYNVPGGKLNRGLSVIDSYKLL 374
            S  K+ FL+VYSVLKS+LL DP+FEFTD SRQWV+RMLDYNVPGGKLNRGLSVIDSYKLL
Sbjct: 2    SDLKTRFLEVYSVLKSDLLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLL 61

Query: 375  KQGEELSKDEVFLASVLGWCIEWLQAYFLVLDDIMDNSHTRRGQLCWFRVENVGTIAVND 554
            K+G+ELS DE+ L+S LGWCIEWLQAYFLVLDDIMD SHTRRGQ CWFR+  VG IA+ND
Sbjct: 62   KEGKELSDDEIVLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRIPKVGMIAIND 121

Query: 555  ALLLRNHIPRILKSHFRDKHYYADLLDIFNEIEFQTASGQMIDLITTLEGQKDLSNYTLP 734
             +LLRNHIPRILK HFR K YY DLLD+FNE+EFQTA GQMIDLITTL G+KDLS Y+LP
Sbjct: 122  GILLRNHIPRILKKHFRQKPYYVDLLDLFNEVEFQTACGQMIDLITTLVGEKDLSKYSLP 181

Query: 735  VHRRIVQYKTAYYSFYLPVACALLMAGENMGNHTNVKSLLIEMGTYFQVQDDYLDCFGDP 914
            +HRRIVQYKTAYYSFYLPVACALLMAGE++  HTNVK +LIEMGTYFQVQDDYLDCFG P
Sbjct: 182  IHRRIVQYKTAYYSFYLPVACALLMAGEDLEKHTNVKDILIEMGTYFQVQDDYLDCFGAP 241

Query: 915  KVIGKIGTDIADNKCSWLVVQSLQLANEDQKKVLVENYGKTDQACVEKVKALYIELDLQE 1094
            +VIGKIGTDI D KCSWLVV++L+L+NE+QKK L ENYGK D ACV K+K LY +L LQ+
Sbjct: 242  EVIGKIGTDIEDFKCSWLVVKALELSNEEQKKCLHENYGKEDPACVAKIKELYKDLKLQD 301

Query: 1095 VFALYERNSYEKLLSSIESNPNKAVQAVLKSFLEKIYKRQ 1214
            VFA YE  SYEKL+  IE++PN++VQAVLKSFL KIYKRQ
Sbjct: 302  VFAEYESKSYEKLIKFIEAHPNQSVQAVLKSFLGKIYKRQ 341


>gb|AAY87903.1| farnesyl diphosphate synthase [Panax ginseng]
          Length = 342

 Score =  549 bits (1414), Expect = e-154
 Identities = 267/340 (78%), Positives = 300/340 (88%)
 Frame = +3

Query: 195  SSTKSDFLKVYSVLKSELLQDPSFEFTDHSRQWVDRMLDYNVPGGKLNRGLSVIDSYKLL 374
            S  K+ FL+VYSVLKSELL DP+FEFTD SRQWV+RMLDYNVPGGKLNRGLSVIDSYKLL
Sbjct: 2    SDLKTRFLEVYSVLKSELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKLL 61

Query: 375  KQGEELSKDEVFLASVLGWCIEWLQAYFLVLDDIMDNSHTRRGQLCWFRVENVGTIAVND 554
            K+G+ELS DE+FL+S LGWCIEWLQAYFLVLDDIMD+SHTRRGQ CWFR+  VG IAVND
Sbjct: 62   KEGKELSDDEIFLSSALGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGMIAVND 121

Query: 555  ALLLRNHIPRILKSHFRDKHYYADLLDIFNEIEFQTASGQMIDLITTLEGQKDLSNYTLP 734
             +LLRNHIPRILK HFR K YY DLLD+FNE+EFQTASGQMIDLITTL G+KDLS Y+LP
Sbjct: 122  GILLRNHIPRILKKHFRQKPYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSLP 181

Query: 735  VHRRIVQYKTAYYSFYLPVACALLMAGENMGNHTNVKSLLIEMGTYFQVQDDYLDCFGDP 914
            +HRRIVQYKTAYYSFYLPVACALLM+GE++  HTNVK +LIEMGTYFQVQDDYLDCFG P
Sbjct: 182  IHRRIVQYKTAYYSFYLPVACALLMSGEDLEKHTNVKDILIEMGTYFQVQDDYLDCFGAP 241

Query: 915  KVIGKIGTDIADNKCSWLVVQSLQLANEDQKKVLVENYGKTDQACVEKVKALYIELDLQE 1094
            +VIGKIGTDI D KCSWLVV++L+L+NE+QKK L ENYGK D A V KVK LY  L LQ+
Sbjct: 242  EVIGKIGTDIEDFKCSWLVVKALELSNEEQKKFLHENYGKDDPASVAKVKELYNTLKLQD 301

Query: 1095 VFALYERNSYEKLLSSIESNPNKAVQAVLKSFLEKIYKRQ 1214
            VFA YE  SY+KL+  IE++P++AVQAVLKSFL KIYKRQ
Sbjct: 302  VFAEYESKSYDKLIKFIEAHPSQAVQAVLKSFLGKIYKRQ 341


>gb|ADV03080.1| farnesyl diphosphate synthase [Bacopa monnieri]
          Length = 349

 Score =  549 bits (1414), Expect = e-154
 Identities = 264/343 (76%), Positives = 302/343 (88%)
 Frame = +3

Query: 186  GMASSTKSDFLKVYSVLKSELLQDPSFEFTDHSRQWVDRMLDYNVPGGKLNRGLSVIDSY 365
            G  +  +  FL VYSVLKSELL DP+FE+TD SR+WV+RMLDYNVPGGKLNRGLSVIDSY
Sbjct: 6    GQTTDLREAFLGVYSVLKSELLNDPAFEWTDASREWVERMLDYNVPGGKLNRGLSVIDSY 65

Query: 366  KLLKQGEELSKDEVFLASVLGWCIEWLQAYFLVLDDIMDNSHTRRGQLCWFRVENVGTIA 545
            KLLK+G++L+++EVFLAS LGWCIEWLQAYFLVLDDIMDNSHTRRGQ CWFRV  VG IA
Sbjct: 66   KLLKEGKDLTEEEVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIA 125

Query: 546  VNDALLLRNHIPRILKSHFRDKHYYADLLDIFNEIEFQTASGQMIDLITTLEGQKDLSNY 725
            VND ++LRNHIPRILK HFR+K YY DL+D+FNE+EFQTASGQMIDLITT+EG+KDLS Y
Sbjct: 126  VNDGIILRNHIPRILKKHFRNKPYYVDLVDLFNEVEFQTASGQMIDLITTIEGEKDLSKY 185

Query: 726  TLPVHRRIVQYKTAYYSFYLPVACALLMAGENMGNHTNVKSLLIEMGTYFQVQDDYLDCF 905
            +LP+HRRIVQYKTAYYSFYLPVACALLMAGEN+ NH NVK +LI+MG YFQVQDDYLDCF
Sbjct: 186  SLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDNHVNVKDVLIDMGIYFQVQDDYLDCF 245

Query: 906  GDPKVIGKIGTDIADNKCSWLVVQSLQLANEDQKKVLVENYGKTDQACVEKVKALYIELD 1085
            G+P+ IGKIGTDI D KCSWLVVQ+L+  NE+QKK+L E+YGK D A V K+KALY E++
Sbjct: 246  GEPEKIGKIGTDIEDFKCSWLVVQALEHCNEEQKKILFEHYGKPDPADVAKIKALYNEIN 305

Query: 1086 LQEVFALYERNSYEKLLSSIESNPNKAVQAVLKSFLEKIYKRQ 1214
            LQ +F  YE  SYEKL SSIES+P+KAVQAVLKSFL KIYKRQ
Sbjct: 306  LQSIFTDYESKSYEKLNSSIESHPSKAVQAVLKSFLGKIYKRQ 348


>gb|ABK95166.1| unknown [Populus trichocarpa]
          Length = 342

 Score =  549 bits (1414), Expect = e-154
 Identities = 265/337 (78%), Positives = 300/337 (89%)
 Frame = +3

Query: 204  KSDFLKVYSVLKSELLQDPSFEFTDHSRQWVDRMLDYNVPGGKLNRGLSVIDSYKLLKQG 383
            KS FL VYSVLK ELL+DP+FE++  SR WVDRMLDYNVPGGKLNRGLSVIDSYK LK+G
Sbjct: 5    KSTFLNVYSVLKKELLEDPAFEWSPDSRDWVDRMLDYNVPGGKLNRGLSVIDSYKYLKEG 64

Query: 384  EELSKDEVFLASVLGWCIEWLQAYFLVLDDIMDNSHTRRGQLCWFRVENVGTIAVNDALL 563
            +EL++DE+FL S LGWCIEWLQAYFLVLDDIMD+SHTRRGQ CWFR+  VG IA ND +L
Sbjct: 65   KELTEDEIFLTSALGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGLIAANDGIL 124

Query: 564  LRNHIPRILKSHFRDKHYYADLLDIFNEIEFQTASGQMIDLITTLEGQKDLSNYTLPVHR 743
            LRNHIPRILK+HFRDK YY DLLD+FNE+EFQTASGQMIDLITTLEG+KDLS YTL +HR
Sbjct: 125  LRNHIPRILKNHFRDKAYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTLSLHR 184

Query: 744  RIVQYKTAYYSFYLPVACALLMAGENMGNHTNVKSLLIEMGTYFQVQDDYLDCFGDPKVI 923
            RIVQYKTAYYSFYLPVACALLMAGEN+ NH +VK++L+EMGTYFQVQDDYLDCFG P+ I
Sbjct: 185  RIVQYKTAYYSFYLPVACALLMAGENLDNHVDVKNILVEMGTYFQVQDDYLDCFGAPETI 244

Query: 924  GKIGTDIADNKCSWLVVQSLQLANEDQKKVLVENYGKTDQACVEKVKALYIELDLQEVFA 1103
            GKIGTDI D KCSWLVV++L++ NE+QKK+L ENYGK D A V KVKALY EL+LQ VFA
Sbjct: 245  GKIGTDIEDFKCSWLVVKALEICNEEQKKLLHENYGKADPANVAKVKALYHELNLQGVFA 304

Query: 1104 LYERNSYEKLLSSIESNPNKAVQAVLKSFLEKIYKRQ 1214
             YE  SYEKL++SIE++P+KAVQAVLKSFL KIYKRQ
Sbjct: 305  DYESKSYEKLIASIEAHPSKAVQAVLKSFLAKIYKRQ 341


>ref|XP_002272641.1| PREDICTED: farnesyl pyrophosphate synthase 1 [Vitis vinifera]
            gi|296089967|emb|CBI39786.3| unnamed protein product
            [Vitis vinifera]
          Length = 341

 Score =  549 bits (1414), Expect = e-154
 Identities = 268/340 (78%), Positives = 300/340 (88%)
 Frame = +3

Query: 195  SSTKSDFLKVYSVLKSELLQDPSFEFTDHSRQWVDRMLDYNVPGGKLNRGLSVIDSYKLL 374
            S TKS FL+VYSVLKSELL DP+FEFTD SRQWV+RMLDYNVPGGKLNRGLSV+DSYKLL
Sbjct: 2    SETKSKFLEVYSVLKSELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVVDSYKLL 61

Query: 375  KQGEELSKDEVFLASVLGWCIEWLQAYFLVLDDIMDNSHTRRGQLCWFRVENVGTIAVND 554
             QG +L+ DEVFLA VLGWCIEWLQAYFLVLDDIMDNSHTRRGQ CWFRV  VG IA ND
Sbjct: 62   -QGRQLTDDEVFLACVLGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAAND 120

Query: 555  ALLLRNHIPRILKSHFRDKHYYADLLDIFNEIEFQTASGQMIDLITTLEGQKDLSNYTLP 734
             ++LRN IPRILK+HF+ K YY DLLD+FNE+EFQTASGQMIDLITT+EG+KDLS Y+LP
Sbjct: 121  GVILRNQIPRILKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSLP 180

Query: 735  VHRRIVQYKTAYYSFYLPVACALLMAGENMGNHTNVKSLLIEMGTYFQVQDDYLDCFGDP 914
            +HRRIVQYKTAYYSFYLPVACALLMAGEN+ NHT+VK +L++MG YFQVQDDYLDCFGDP
Sbjct: 181  LHRRIVQYKTAYYSFYLPVACALLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDCFGDP 240

Query: 915  KVIGKIGTDIADNKCSWLVVQSLQLANEDQKKVLVENYGKTDQACVEKVKALYIELDLQE 1094
            +VIGKIGTDI D KCSWLVV++L++ NE+QKK L  NYGK D A V KVKALY +LDLQ 
Sbjct: 241  QVIGKIGTDIEDFKCSWLVVKALEICNEEQKKTLYGNYGKADPANVAKVKALYKDLDLQG 300

Query: 1095 VFALYERNSYEKLLSSIESNPNKAVQAVLKSFLEKIYKRQ 1214
            VF  YE  SYE L+SSIE++P+KAVQAVLKSFL KIYKRQ
Sbjct: 301  VFLEYESKSYETLVSSIEAHPSKAVQAVLKSFLGKIYKRQ 340