BLASTX nr result

ID: Coptis23_contig00024016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024016
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67266.1| hypothetical protein VITISV_028729 [Vitis vinifera]   193   3e-47
ref|XP_002274305.1| PREDICTED: UPF0496 protein At3g19330 [Vitis ...   192   6e-47
ref|XP_002883173.1| hypothetical protein ARALYDRAFT_479449 [Arab...   186   3e-45
ref|XP_002512821.1| conserved hypothetical protein [Ricinus comm...   183   3e-44
ref|NP_974340.1| uncharacterized protein [Arabidopsis thaliana] ...   179   3e-43

>emb|CAN67266.1| hypothetical protein VITISV_028729 [Vitis vinifera]
          Length = 996

 Score =  193 bits (490), Expect = 3e-47
 Identities = 103/208 (49%), Positives = 135/208 (64%), Gaps = 23/208 (11%)
 Frame = -2

Query: 656  CDRVYDVLVEFNLIDNPFPHPINENFQETRLGFVELKQQLDQRLKKTRKKNRFI----RN 489
            C++ +DV ++F+ +DNPFP P + NF++ R  F +LK+QLD  ++K+R K R I      
Sbjct: 787  CBQAFDVFLQFDSLDNPFPCPDSHNFRDMRRCFSQLKEQLDGHIRKSRSKIRLICRATAG 846

Query: 488  SVLC-------------------LTTLVSNPSQVSFPSKLDKNKLKHIAQLDAAAKGVYV 366
            S  C                   L  L++  S V  P +L K +L H AQLDAAA+G YV
Sbjct: 847  SAFCFIGTAVGVAISAVAIATHTLVALIAPLSTVFLPPRLSKKELAHGAQLDAAARGTYV 906

Query: 365  LNNDLDTIDRLISRLHAVVESDKVLIRIGIERGRDKYPIQEVVKQLRKNHLNFVNQLKDL 186
            L +DL TID L++ LH  VE DK LIR+G+E GRDK+ IQEV K L KNHL F++QLKDL
Sbjct: 907  LCHDLGTIDSLVAWLHTAVEGDKRLIRLGLEGGRDKHTIQEVAKHLCKNHLYFLHQLKDL 966

Query: 185  EEHVCLCFATVNRARSLLLQEIHLQEEN 102
            EEH+CLCF TVNRARSLLL+EI L + +
Sbjct: 967  EEHICLCFTTVNRARSLLLREIDLHQSS 994


>ref|XP_002274305.1| PREDICTED: UPF0496 protein At3g19330 [Vitis vinifera]
           gi|297745643|emb|CBI40808.3| unnamed protein product
           [Vitis vinifera]
          Length = 376

 Score =  192 bits (487), Expect = 6e-47
 Identities = 103/208 (49%), Positives = 135/208 (64%), Gaps = 23/208 (11%)
 Frame = -2

Query: 656 CDRVYDVLVEFNLIDNPFPHPINENFQETRLGFVELKQQLDQRLKKTRKKNRFI----RN 489
           C++ +DV ++F+ +DNPFP P + NF++ R  F +LK+QLD  ++K+R K R I      
Sbjct: 167 CNQAFDVFLQFDSLDNPFPCPDSHNFRDMRRCFSQLKEQLDGHIRKSRSKIRLICRATAG 226

Query: 488 SVLC-------------------LTTLVSNPSQVSFPSKLDKNKLKHIAQLDAAAKGVYV 366
           S  C                   L  L++  S V  P +L K +L H AQLDAAA+G YV
Sbjct: 227 SAFCFIGTAVGVAISAVAIATHTLVALIAPLSTVFLPPRLSKKELAHGAQLDAAARGTYV 286

Query: 365 LNNDLDTIDRLISRLHAVVESDKVLIRIGIERGRDKYPIQEVVKQLRKNHLNFVNQLKDL 186
           L +DL TID L++ LH  VE DK LIR+G+E GRDK+ IQEV K L KNHL F++QLKDL
Sbjct: 287 LCHDLGTIDSLVAWLHTAVEGDKRLIRLGLEGGRDKHTIQEVAKHLCKNHLYFLHQLKDL 346

Query: 185 EEHVCLCFATVNRARSLLLQEIHLQEEN 102
           EEH+CLCF TVNRARSLLL+EI L + +
Sbjct: 347 EEHICLCFTTVNRARSLLLREIDLHQSS 374


>ref|XP_002883173.1| hypothetical protein ARALYDRAFT_479449 [Arabidopsis lyrata subsp.
           lyrata] gi|297329013|gb|EFH59432.1| hypothetical protein
           ARALYDRAFT_479449 [Arabidopsis lyrata subsp. lyrata]
          Length = 349

 Score =  186 bits (473), Expect = 3e-45
 Identities = 95/184 (51%), Positives = 131/184 (71%), Gaps = 3/184 (1%)
 Frame = -2

Query: 656 CDRVYDVLVEFNLIDNPFPHPINENFQETRLGFVELKQQLDQRLKKTRKKNRFIRNSV-- 483
           C+  +DV ++ +  +NPF  P + +FQ+T+L F +LK  LD+RL+K+R + R I ++   
Sbjct: 168 CNLAFDVFLKLDTFENPFSSPESHSFQDTQLCFSQLKNNLDRRLRKSRSRVRLIHHATAG 227

Query: 482 -LCLTTLVSNPSQVSFPSKLDKNKLKHIAQLDAAAKGVYVLNNDLDTIDRLISRLHAVVE 306
            LC   L         P    + +L +I QL+AA+KG +VLN DLDTIDRL+SRLH+ +E
Sbjct: 228 PLCSPYL---------PHSFKRKELTNICQLNAASKGTFVLNKDLDTIDRLVSRLHSGIE 278

Query: 305 SDKVLIRIGIERGRDKYPIQEVVKQLRKNHLNFVNQLKDLEEHVCLCFATVNRARSLLLQ 126
            DK LIR+G+ERGRD + IQE+VKQLRKN+LN  +QLKDLE+H+CL F  VN+ARSLLL+
Sbjct: 279 YDKHLIRLGLERGRDLHSIQEIVKQLRKNNLNLTHQLKDLEDHICLWFTNVNKARSLLLK 338

Query: 125 EIHL 114
           EIHL
Sbjct: 339 EIHL 342


>ref|XP_002512821.1| conserved hypothetical protein [Ricinus communis]
           gi|223547832|gb|EEF49324.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 407

 Score =  183 bits (464), Expect = 3e-44
 Identities = 97/208 (46%), Positives = 131/208 (62%), Gaps = 25/208 (12%)
 Frame = -2

Query: 656 CDRVYDVLVEFNLIDNPFPHPINENFQETRLGFVELKQQLDQRLKKTRKKNRFIRN---- 489
           CD  Y++ ++F+  DNPFP P +  F+     F EL QQLD RL+K+R K   +R     
Sbjct: 196 CDYAYEIFMQFDRCDNPFPCPFSHEFEGIHRSFSELSQQLDHRLRKSRSKVHLVRRATLA 255

Query: 488 SVLC-------------------LTTLVSNP--SQVSFPSKLDKNKLKHIAQLDAAAKGV 372
           S LC                   L  +V+ P  +  S PS L K +L H+ QLDAAA+G 
Sbjct: 256 SALCFIGSAVAITLTALAITGHALVAIVACPFCAVTSLPSNLTKKELAHVKQLDAAARGT 315

Query: 371 YVLNNDLDTIDRLISRLHAVVESDKVLIRIGIERGRDKYPIQEVVKQLRKNHLNFVNQLK 192
           YVLNN+LDT+DRL++ L+  +E+DK LIR+G+  G DKY I EV+K LRKNH   ++QLK
Sbjct: 316 YVLNNELDTVDRLVALLYNSIENDKHLIRLGLGTGSDKYFISEVLKHLRKNHPTVIDQLK 375

Query: 191 DLEEHVCLCFATVNRARSLLLQEIHLQE 108
           +LE+H+CL F  VNRAR+LLLQEIH+ +
Sbjct: 376 NLEKHICLYFIAVNRARNLLLQEIHVYQ 403


>ref|NP_974340.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332642704|gb|AEE76225.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 345

 Score =  179 bits (455), Expect = 3e-43
 Identities = 92/184 (50%), Positives = 127/184 (69%), Gaps = 3/184 (1%)
 Frame = -2

Query: 656 CDRVYDVLVEFNLIDNPFPHPINENFQETRLGFVELKQQLDQRLKKTRKKNRFIRNSV-- 483
           CD  +DV ++ +  +NPF  P + +F++T+L F +LK  LD+RL+K+R + R I ++   
Sbjct: 168 CDLAFDVFLKLDTFENPFSSPESYSFRDTQLCFSQLKHNLDRRLRKSRSRVRLIHHATAG 227

Query: 482 -LCLTTLVSNPSQVSFPSKLDKNKLKHIAQLDAAAKGVYVLNNDLDTIDRLISRLHAVVE 306
            LC   L         P    + +L +I QL+AA+KG +VLN DLDTIDRL+SRLH  +E
Sbjct: 228 PLCSPYL---------PHSFKRKELTNICQLNAASKGTFVLNKDLDTIDRLVSRLHTGIE 278

Query: 305 SDKVLIRIGIERGRDKYPIQEVVKQLRKNHLNFVNQLKDLEEHVCLCFATVNRARSLLLQ 126
            DK LIR+G+ERGRD + IQE++K LRK+HL   +QLKDLE+H+CL F  VN+ARSLLL 
Sbjct: 279 YDKFLIRLGLERGRDVHSIQEILKLLRKSHLPLTHQLKDLEDHICLWFTNVNKARSLLLT 338

Query: 125 EIHL 114
           EIHL
Sbjct: 339 EIHL 342


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