BLASTX nr result

ID: Coptis23_contig00024011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024011
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520320.1| PREDICTED: fatty acyl-CoA reductase 2-like [...   207   8e-52
ref|XP_003535102.1| PREDICTED: fatty acyl-CoA reductase 2-like [...   204   5e-51
gb|AFB77197.1| male sterility protein 2, partial [Lycium barbarum]    204   9e-51
gb|AEQ33639.1| male sterility protein 2 [Lycium barbarum]             204   9e-51
ref|XP_002323348.1| predicted protein [Populus trichocarpa] gi|2...   201   7e-50

>ref|XP_003520320.1| PREDICTED: fatty acyl-CoA reductase 2-like [Glycine max]
          Length = 609

 Score =  207 bits (527), Expect = 8e-52
 Identities = 100/186 (53%), Positives = 139/186 (74%), Gaps = 8/186 (4%)
 Frame = +1

Query: 1   LDTVPADMVVNAILAATVKHASNRKPGLSIYQIASSVANPLVFEDLFSYIFQYFCSSPYM 180
           LD VPADMVVNA LAA  +H  ++KP +++YQIASSV NPLVF+DL   +++++ SSP +
Sbjct: 419 LDVVPADMVVNATLAAMARHGVSQKPDINVYQIASSVVNPLVFQDLARLLYEHYSSSPCI 478

Query: 181 DLNRRPINVQRMKVFNSIGDFNTHIQTEAVQKS-----EDSKGRMCRR---RIQRSLDIA 336
           D   RPI V  MK+F+S  +F+ H+  +A+QK        SKG+M ++     ++S++ A
Sbjct: 479 DSKGRPIQVPLMKLFSSTEEFSGHLWRDAIQKRGLTAVASSKGKMSQKLENMCRKSVEQA 538

Query: 337 KHLAEIYLPYTFYGGRFDNSNMRKLLEELSQEEKRSFGFDVESIDWEDFICNIHIPGVMR 516
           K+LA IY PYTFYGGRFDNSN ++L+E +S++EKR FGFDV+SIDW D+I N+HIPG+ R
Sbjct: 539 KYLANIYEPYTFYGGRFDNSNTQRLMESMSEKEKREFGFDVKSIDWNDYITNVHIPGLRR 598

Query: 517 HVLKGR 534
           HV+KGR
Sbjct: 599 HVMKGR 604


>ref|XP_003535102.1| PREDICTED: fatty acyl-CoA reductase 2-like [Glycine max]
          Length = 536

 Score =  204 bits (520), Expect = 5e-51
 Identities = 100/186 (53%), Positives = 136/186 (73%), Gaps = 8/186 (4%)
 Frame = +1

Query: 1   LDTVPADMVVNAILAATVKHASNRKPGLSIYQIASSVANPLVFEDLFSYIFQYFCSSPYM 180
           LD VPADMVVNA LAA  +H  N+KP +++YQIASSV NPLVF+DL   +++++ SSP +
Sbjct: 346 LDVVPADMVVNATLAAMARHGMNQKPDINVYQIASSVVNPLVFQDLARLLYEHYSSSPCI 405

Query: 181 DLNRRPINVQRMKVFNSIGDFNTHIQTEAVQKS-----EDSKGRMCRR---RIQRSLDIA 336
           D   RPI V  MK F+S  +F+ H+  +A+QK        SK +M ++     ++S++ A
Sbjct: 406 DSMGRPIQVPLMKFFSSTEEFSGHLWRDAIQKRGITAMASSKAKMSQKLENMCRKSVEQA 465

Query: 337 KHLAEIYLPYTFYGGRFDNSNMRKLLEELSQEEKRSFGFDVESIDWEDFICNIHIPGVMR 516
           K+LA IY PYTFYGGRFDNSN ++L+E +S+EEKR F FDV+SIDW D+I N+HIPG+ R
Sbjct: 466 KYLANIYEPYTFYGGRFDNSNTQRLMESMSEEEKREFDFDVKSIDWNDYITNVHIPGLRR 525

Query: 517 HVLKGR 534
           HV+KGR
Sbjct: 526 HVMKGR 531


>gb|AFB77197.1| male sterility protein 2, partial [Lycium barbarum]
          Length = 526

 Score =  204 bits (518), Expect = 9e-51
 Identities = 101/186 (54%), Positives = 138/186 (74%), Gaps = 8/186 (4%)
 Frame = +1

Query: 1   LDTVPADMVVNAILAATVKHASNRKPGLSIYQIASSVANPLVFEDLFSYIFQYFCSSPYM 180
           LD VPADMVVNA LAA  KH +  KPG +IYQ+ASSV NPLVF+DL + +F +F SSPY+
Sbjct: 334 LDVVPADMVVNATLAAIAKHGAAGKPGSNIYQVASSVVNPLVFKDLATLLFDHFNSSPYI 393

Query: 181 DLNRRPINVQRMKVFNSIGDFNTHIQTEAVQKS-----EDSKGRMCRRR---IQRSLDIA 336
           D   RPI+V RMK+ NS+ D + H+  +A+ +S      D  G++ R+     ++S++ A
Sbjct: 394 DSKGRPIHVPRMKLLNSMEDLSFHLWQDAINRSGLTDTADPNGKLSRKLENICRKSVEQA 453

Query: 337 KHLAEIYLPYTFYGGRFDNSNMRKLLEELSQEEKRSFGFDVESIDWEDFICNIHIPGVMR 516
           K+LA IY PYTFYGGRFDNSN + L+E +S+EE+  FGFDVE+IDW+D+I N+HIPG+ +
Sbjct: 454 KYLAHIYEPYTFYGGRFDNSNTQWLMECMSKEERWQFGFDVENIDWKDYISNVHIPGLRK 513

Query: 517 HVLKGR 534
           +V+KGR
Sbjct: 514 YVMKGR 519


>gb|AEQ33639.1| male sterility protein 2 [Lycium barbarum]
          Length = 264

 Score =  204 bits (518), Expect = 9e-51
 Identities = 101/186 (54%), Positives = 138/186 (74%), Gaps = 8/186 (4%)
 Frame = +1

Query: 1   LDTVPADMVVNAILAATVKHASNRKPGLSIYQIASSVANPLVFEDLFSYIFQYFCSSPYM 180
           LD VPADMVVNA LAA  KH +  KPG +IYQ+ASSV NPLVF+DL + +F +F SSPY+
Sbjct: 72  LDVVPADMVVNATLAAIAKHGAAGKPGSNIYQVASSVVNPLVFKDLATLLFDHFNSSPYI 131

Query: 181 DLNRRPINVQRMKVFNSIGDFNTHIQTEAVQKS-----EDSKGRMCRRR---IQRSLDIA 336
           D   RPI+V RMK+ NS+ D + H+  +A+ +S      D  G++ R+     ++S++ A
Sbjct: 132 DSKGRPIHVPRMKLLNSMEDLSFHLWQDAINRSGLTDTADPNGKLSRKLENICRKSVEQA 191

Query: 337 KHLAEIYLPYTFYGGRFDNSNMRKLLEELSQEEKRSFGFDVESIDWEDFICNIHIPGVMR 516
           K+LA IY PYTFYGGRFDNSN + L+E +S+EE+  FGFDVE+IDW+D+I N+HIPG+ +
Sbjct: 192 KYLAHIYEPYTFYGGRFDNSNTQWLMECMSKEERWQFGFDVENIDWKDYISNVHIPGLRK 251

Query: 517 HVLKGR 534
           +V+KGR
Sbjct: 252 YVMKGR 257


>ref|XP_002323348.1| predicted protein [Populus trichocarpa] gi|222867978|gb|EEF05109.1|
           predicted protein [Populus trichocarpa]
          Length = 610

 Score =  201 bits (510), Expect = 7e-50
 Identities = 99/186 (53%), Positives = 133/186 (71%), Gaps = 8/186 (4%)
 Frame = +1

Query: 1   LDTVPADMVVNAILAATVKHASNRKPGLSIYQIASSVANPLVFEDLFSYIFQYFCSSPYM 180
           LD VPADMVVNA LAA   H   +KP +++YQIASSV NPLVF+DL + + +++ SSPYM
Sbjct: 421 LDVVPADMVVNATLAAMAWHGMEQKPDINVYQIASSVVNPLVFQDLATLLHEHYNSSPYM 480

Query: 181 DLNRRPINVQRMKVFNSIGDFNTHIQTEAVQKSEDSKGRMCRRRI--------QRSLDIA 336
           D N RPI+V  MK+F+S+ +F+ H+     Q+S  +      R++        ++S++ A
Sbjct: 481 DSNGRPIHVPSMKLFSSMEEFSAHLWRYVTQRSRLAGMATSDRKLSQKHENICRKSVEQA 540

Query: 337 KHLAEIYLPYTFYGGRFDNSNMRKLLEELSQEEKRSFGFDVESIDWEDFICNIHIPGVMR 516
           K+LA IY PYTFYGGRFDNSN +KL+E +S+ EK  FGFDV SIDW D+I N+HIPG+ R
Sbjct: 541 KYLASIYEPYTFYGGRFDNSNTQKLMERMSENEKGIFGFDVGSIDWRDYITNVHIPGLRR 600

Query: 517 HVLKGR 534
           HV+KGR
Sbjct: 601 HVMKGR 606


Top