BLASTX nr result

ID: Coptis23_contig00024009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024009
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22952.3| unnamed protein product [Vitis vinifera]              242   2e-62
ref|XP_002271110.1| PREDICTED: pumilio homolog 24-like [Vitis vi...   242   2e-62
emb|CAN62467.1| hypothetical protein VITISV_016047 [Vitis vinifera]   240   1e-61
ref|XP_002516980.1| Protein penguin, putative [Ricinus communis]...   237   8e-61
ref|XP_002328590.1| predicted protein [Populus trichocarpa] gi|2...   226   1e-57

>emb|CBI22952.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score =  242 bits (618), Expect = 2e-62
 Identities = 125/161 (77%), Positives = 135/161 (83%)
 Frame = -1

Query: 484 RKKKRKRHYTLEQELALLWEKMRRRNIAKEERSKLVSEAIQKMKGKICEIAVSHVSSRVL 305
           RKKKRK+HYTLEQELA LWEKMRRRNIAKE+RS+LVSEA+ KMKGKI EIA SHVSSRVL
Sbjct: 93  RKKKRKKHYTLEQELASLWEKMRRRNIAKEDRSRLVSEALHKMKGKIPEIAGSHVSSRVL 152

Query: 304 QTCVKYCSAEERETVFEELRPQLLTLACNTYAVHLVTKMLDNASKKQLDGFISSLHGHVA 125
           QTCVKYC+  ER+ VFEEL+PQLLTLACNTYAVHLV KMLDNASKK L  F+SSLHGHVA
Sbjct: 153 QTCVKYCTQAERDAVFEELQPQLLTLACNTYAVHLVKKMLDNASKKHLAAFMSSLHGHVA 212

Query: 124 SLLRNMVGSVVIEHAYQLGNGFQKXXXXXXXXXXXXXLFKD 2
           SLLR+MVGSVV+EHAYQLGN  QK             LFKD
Sbjct: 213 SLLRHMVGSVVVEHAYQLGNATQKQELLMELYATELQLFKD 253


>ref|XP_002271110.1| PREDICTED: pumilio homolog 24-like [Vitis vinifera]
          Length = 651

 Score =  242 bits (618), Expect = 2e-62
 Identities = 125/161 (77%), Positives = 135/161 (83%)
 Frame = -1

Query: 484 RKKKRKRHYTLEQELALLWEKMRRRNIAKEERSKLVSEAIQKMKGKICEIAVSHVSSRVL 305
           RKKKRK+HYTLEQELA LWEKMRRRNIAKE+RS+LVSEA+ KMKGKI EIA SHVSSRVL
Sbjct: 93  RKKKRKKHYTLEQELASLWEKMRRRNIAKEDRSRLVSEALHKMKGKIPEIAGSHVSSRVL 152

Query: 304 QTCVKYCSAEERETVFEELRPQLLTLACNTYAVHLVTKMLDNASKKQLDGFISSLHGHVA 125
           QTCVKYC+  ER+ VFEEL+PQLLTLACNTYAVHLV KMLDNASKK L  F+SSLHGHVA
Sbjct: 153 QTCVKYCTQAERDAVFEELQPQLLTLACNTYAVHLVKKMLDNASKKHLAAFMSSLHGHVA 212

Query: 124 SLLRNMVGSVVIEHAYQLGNGFQKXXXXXXXXXXXXXLFKD 2
           SLLR+MVGSVV+EHAYQLGN  QK             LFKD
Sbjct: 213 SLLRHMVGSVVVEHAYQLGNATQKQELLMELYATELQLFKD 253


>emb|CAN62467.1| hypothetical protein VITISV_016047 [Vitis vinifera]
          Length = 662

 Score =  240 bits (612), Expect = 1e-61
 Identities = 124/161 (77%), Positives = 134/161 (83%)
 Frame = -1

Query: 484 RKKKRKRHYTLEQELALLWEKMRRRNIAKEERSKLVSEAIQKMKGKICEIAVSHVSSRVL 305
           RKKKRK+HYTLEQELA LWEKMRRRNIAKE+RS+LVSEA+ KMKGKI EIA SHVSS VL
Sbjct: 93  RKKKRKKHYTLEQELASLWEKMRRRNIAKEDRSRLVSEALHKMKGKIPEIAGSHVSSXVL 152

Query: 304 QTCVKYCSAEERETVFEELRPQLLTLACNTYAVHLVTKMLDNASKKQLDGFISSLHGHVA 125
           QTCVKYC+  ER+ VFEEL+PQLLTLACNTYAVHLV KMLDNASKK L  F+SSLHGHVA
Sbjct: 153 QTCVKYCTQAERDAVFEELQPQLLTLACNTYAVHLVKKMLDNASKKHLAAFMSSLHGHVA 212

Query: 124 SLLRNMVGSVVIEHAYQLGNGFQKXXXXXXXXXXXXXLFKD 2
           SLLR+MVGSVV+EHAYQLGN  QK             LFKD
Sbjct: 213 SLLRHMVGSVVVEHAYQLGNATQKQELLMELYATELQLFKD 253


>ref|XP_002516980.1| Protein penguin, putative [Ricinus communis]
           gi|223544068|gb|EEF45594.1| Protein penguin, putative
           [Ricinus communis]
          Length = 613

 Score =  237 bits (604), Expect = 8e-61
 Identities = 123/161 (76%), Positives = 132/161 (81%)
 Frame = -1

Query: 484 RKKKRKRHYTLEQELALLWEKMRRRNIAKEERSKLVSEAIQKMKGKICEIAVSHVSSRVL 305
           RKKKRKRHYTLEQELA LWEKMR+RNI+KE+RSK +SEA+QKMKGKI EIA SHVSSRVL
Sbjct: 79  RKKKRKRHYTLEQELASLWEKMRQRNISKEDRSKYISEALQKMKGKIPEIASSHVSSRVL 138

Query: 304 QTCVKYCSAEERETVFEELRPQLLTLACNTYAVHLVTKMLDNASKKQLDGFISSLHGHVA 125
           QTCVKYCS  ER+ VFEEL+P  LT +CNTYAVHLV KMLDNASKKQL  FISSL GHVA
Sbjct: 139 QTCVKYCSQTERDAVFEELKPHFLTFSCNTYAVHLVKKMLDNASKKQLAEFISSLRGHVA 198

Query: 124 SLLRNMVGSVVIEHAYQLGNGFQKXXXXXXXXXXXXXLFKD 2
           SLLR+MVGSVVIEHAYQLGN  QK             LFKD
Sbjct: 199 SLLRHMVGSVVIEHAYQLGNATQKQELLLELYSAELQLFKD 239


>ref|XP_002328590.1| predicted protein [Populus trichocarpa] gi|222838572|gb|EEE76937.1|
           predicted protein [Populus trichocarpa]
          Length = 655

 Score =  226 bits (577), Expect = 1e-57
 Identities = 118/161 (73%), Positives = 130/161 (80%)
 Frame = -1

Query: 484 RKKKRKRHYTLEQELALLWEKMRRRNIAKEERSKLVSEAIQKMKGKICEIAVSHVSSRVL 305
           RKK+RK++YTLEQELA LWEKMR+RNIAKEERSK+++EAIQKMKGKI EIA SHVSSRVL
Sbjct: 87  RKKRRKQYYTLEQELARLWEKMRQRNIAKEERSKIITEAIQKMKGKIPEIASSHVSSRVL 146

Query: 304 QTCVKYCSAEERETVFEELRPQLLTLACNTYAVHLVTKMLDNASKKQLDGFISSLHGHVA 125
           QTCVKYCS  ER+ VF+EL+P  LT A N YA+HLVTKMLDNASKKQL  FIS L GHVA
Sbjct: 147 QTCVKYCSQTERDAVFDELKPHFLTFASNKYAIHLVTKMLDNASKKQLAEFISPLRGHVA 206

Query: 124 SLLRNMVGSVVIEHAYQLGNGFQKXXXXXXXXXXXXXLFKD 2
           SLLR+ VGSVVIEHAYQLGN  QK             LFKD
Sbjct: 207 SLLRHAVGSVVIEHAYQLGNATQKQELLMELYSTELQLFKD 247


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