BLASTX nr result

ID: Coptis23_contig00024008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024008
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62615.1| hypothetical protein VITISV_036164 [Vitis vinifera]    56   3e-06
ref|XP_002263618.2| PREDICTED: probable leucine-rich repeat rece...    56   3e-06
emb|CBI25541.3| unnamed protein product [Vitis vinifera]               56   3e-06

>emb|CAN62615.1| hypothetical protein VITISV_036164 [Vitis vinifera]
          Length = 546

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/78 (44%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
 Frame = -1

Query: 227 ILSKVCGTDVFTYSRSSEHKLFYINGGAVDKVSFCKSLKLSNAVRCF---SPSSLKEWEI 57
           I SKVCGTD   Y  S  ++LFYING  VDK  FCK+LK+  A  C     P S      
Sbjct: 34  IQSKVCGTDHVAYLNSHGYELFYINGDVVDKDVFCKALKVYYANNCVFEGHPGS------ 87

Query: 56  IYTNDCSLGIYLVEKPRR 3
              N C L + LVE P +
Sbjct: 88  ---NYCGLNLPLVELPAK 102


>ref|XP_002263618.2| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At4g00330-like [Vitis vinifera]
          Length = 502

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/76 (46%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
 Frame = -1

Query: 227 ILSKVCGTDVFTYSRSSEHKLFYINGGAVDKVSFCKSLKLSNAVRCF---SPSSLKEWEI 57
           I SKVCGTD   Y  S  ++LFYING  VDK  FCK+LK+  A  C     P S      
Sbjct: 34  IQSKVCGTDHVAYLNSHGYELFYINGDVVDKDVFCKALKVYYANNCVFEGHPGS------ 87

Query: 56  IYTNDCSLGIYLVEKP 9
              N C L + LVE P
Sbjct: 88  ---NYCGLNLPLVELP 100


>emb|CBI25541.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/76 (46%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
 Frame = -1

Query: 227 ILSKVCGTDVFTYSRSSEHKLFYINGGAVDKVSFCKSLKLSNAVRCF---SPSSLKEWEI 57
           I SKVCGTD   Y  S  ++LFYING  VDK  FCK+LK+  A  C     P S      
Sbjct: 24  IQSKVCGTDHVAYLNSHGYELFYINGDVVDKDVFCKALKVYYANNCVFEGHPGS------ 77

Query: 56  IYTNDCSLGIYLVEKP 9
              N C L + LVE P
Sbjct: 78  ---NYCGLNLPLVELP 90


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