BLASTX nr result

ID: Coptis23_contig00024007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024007
         (897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264856.1| PREDICTED: uncharacterized protein LOC100256...   131   2e-28
emb|CAN75300.1| hypothetical protein VITISV_008677 [Vitis vinifera]   129   9e-28
ref|XP_004152015.1| PREDICTED: uncharacterized protein LOC101207...   123   7e-26
ref|XP_002521134.1| conserved hypothetical protein [Ricinus comm...   122   1e-25
ref|XP_002303086.1| predicted protein [Populus trichocarpa] gi|1...   117   4e-24

>ref|XP_002264856.1| PREDICTED: uncharacterized protein LOC100256241 [Vitis vinifera]
           gi|297744291|emb|CBI37261.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score =  131 bits (329), Expect = 2e-28
 Identities = 71/124 (57%), Positives = 84/124 (67%), Gaps = 6/124 (4%)
 Frame = -1

Query: 672 RHSRNAPVVVSAQFDILRVLQTAWKVGKDGIEAGTDLVPASIPRPLARXXXXXXXXXXXX 493
           R SR+ PVV ++Q + LRV+QT WK+GKDGIEAGT+LVP S+PRP+AR            
Sbjct: 52  RKSRSRPVVCASQSNFLRVIQTVWKIGKDGIEAGTNLVPESVPRPIARISVTVVTLAVAL 111

Query: 492 XXXXXXXSTAFFVLGVMGLVYFVFIALNKDDGPR------XXXXGNVTTDDSLEEARRIM 331
                  STAFFVL +MGL+YF FIALNKDDGPR          G  +T+DSLEEARRIM
Sbjct: 112 FVFKSFLSTAFFVLAMMGLIYFTFIALNKDDGPRGGGGGGGVDGGTPSTEDSLEEARRIM 171

Query: 330 EKYK 319
           EKYK
Sbjct: 172 EKYK 175


>emb|CAN75300.1| hypothetical protein VITISV_008677 [Vitis vinifera]
          Length = 221

 Score =  129 bits (324), Expect = 9e-28
 Identities = 70/121 (57%), Positives = 83/121 (68%), Gaps = 5/121 (4%)
 Frame = -1

Query: 672 RHSRNAPVVVSAQFDILRVLQTAWKVGKDGIEAGTDLVPASIPRPLARXXXXXXXXXXXX 493
           R SR+ PVV ++Q + LRV+QT WK+GKDGIEAGT+LVP S+PRP+AR            
Sbjct: 52  RKSRSRPVVCASQSNFLRVIQTVWKIGKDGIEAGTNLVPESVPRPIARISVTVVTLAVAL 111

Query: 492 XXXXXXXSTAFFVLGVMGLVYFVFIALNKDDGPRXXXXGNV-----TTDDSLEEARRIME 328
                  STAFFVL +MGL+YF FIALNKDDGPR    G V     +T+DSLEEARRIME
Sbjct: 112 FVFKSFLSTAFFVLAMMGLIYFTFIALNKDDGPRGGGGGGVDGGTPSTEDSLEEARRIME 171

Query: 327 K 325
           K
Sbjct: 172 K 172


>ref|XP_004152015.1| PREDICTED: uncharacterized protein LOC101207451 [Cucumis sativus]
           gi|449507470|ref|XP_004163041.1| PREDICTED:
           uncharacterized LOC101207451 [Cucumis sativus]
          Length = 177

 Score =  123 bits (308), Expect = 7e-26
 Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 3/121 (2%)
 Frame = -1

Query: 672 RHSRNAPVVVSAQFDILRVLQTAWKVGKDGIEAGTDLVPASIPRPLARXXXXXXXXXXXX 493
           R S + P+V +AQ + LRV QT WK+GKDGIEAGTDLVP S+PRP+AR            
Sbjct: 57  RGSPSFPLVYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPRPIARISVGIVALTIGL 116

Query: 492 XXXXXXXSTAFFVLGVMGLVYFVFIALNKDDGPRXXXXGN---VTTDDSLEEARRIMEKY 322
                  STA FVL +MG +YF+FIALNKD+GPR     +    +T+++LEEARRIMEKY
Sbjct: 117 FLFKSVLSTALFVLAMMGAIYFIFIALNKDEGPRGGGGSSSSPTSTEETLEEARRIMEKY 176

Query: 321 K 319
           K
Sbjct: 177 K 177


>ref|XP_002521134.1| conserved hypothetical protein [Ricinus communis]
           gi|223539703|gb|EEF41285.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 177

 Score =  122 bits (306), Expect = 1e-25
 Identities = 66/121 (54%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
 Frame = -1

Query: 678 LQRHSRNAPVVVSAQFDILRVLQTAWKVGKDGIEAGTDLVPASIPRPLARXXXXXXXXXX 499
           + R+SR+ PV+ + Q + L+V+QTAWKVGKDGI+AGT LVP S+PRP+AR          
Sbjct: 57  ISRNSRSFPVIFAVQSNFLKVVQTAWKVGKDGIDAGTRLVPDSVPRPIARISVTIVALSV 116

Query: 498 XXXXXXXXXSTAFFVLGVMGLVYFVFIALNKDDGPRXXXXGNVT-TDDSLEEARRIMEKY 322
                    STAFF L  MG VYFVFIALNKD  P+    G+ T ++D LEEARRIMEKY
Sbjct: 117 SLFVLKSVLSTAFFALATMGFVYFVFIALNKDQRPKGGGTGSTTSSEDPLEEARRIMEKY 176

Query: 321 K 319
           K
Sbjct: 177 K 177


>ref|XP_002303086.1| predicted protein [Populus trichocarpa] gi|118489453|gb|ABK96529.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222844812|gb|EEE82359.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score =  117 bits (293), Expect = 4e-24
 Identities = 66/119 (55%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
 Frame = -1

Query: 672 RHSRNAPVVV-SAQFDILRVLQTAWKVGKDGIEAGTDLVPASIPRPLARXXXXXXXXXXX 496
           ++ R+APVVV +AQ + L+V+QT WKVGKDGIE GT+LVP S+PRP+AR           
Sbjct: 56  KNPRSAPVVVFAAQSNFLKVVQTVWKVGKDGIETGTNLVPNSVPRPIARVAVTFVVLAVS 115

Query: 495 XXXXXXXXSTAFFVLGVMGLVYFVFIALNKDDGPRXXXXGNVTTDDSLEEARRIMEKYK 319
                   ST FF L  MGLVYF FIALNKD GP+    G  T +D  EEARRIMEKYK
Sbjct: 116 LFLLKSFLSTVFFALATMGLVYFTFIALNKDQGPK--GGGGTTLEDPEEEARRIMEKYK 172


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