BLASTX nr result
ID: Coptis23_contig00023983
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00023983 (441 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002303485.1| predicted protein [Populus trichocarpa] gi|2... 76 3e-12 ref|NP_568757.2| protein SWITCH1 (protein DYAD) [Arabidopsis tha... 75 6e-12 gb|AAL13233.1| SWITCH1 splice variant S [Arabidopsis thaliana] 75 6e-12 gb|AAL73988.1|AF466153_1 DYAD [Arabidopsis thaliana] gi|9759279|... 75 6e-12 ref|XP_002865854.1| hypothetical protein ARALYDRAFT_495204 [Arab... 72 4e-11 >ref|XP_002303485.1| predicted protein [Populus trichocarpa] gi|222840917|gb|EEE78464.1| predicted protein [Populus trichocarpa] Length = 830 Score = 75.9 bits (185), Expect = 3e-12 Identities = 34/56 (60%), Positives = 43/56 (76%) Frame = +1 Query: 157 LESADLVNVQKEAGVKYPDWKPPPRWTTGDNPSQEPDCASELKLLKEEMANIRN*M 324 LE ADLV+++KEAGV+ P W PPP W GDNPSQ+P CA E+K L+EE+A I+ M Sbjct: 378 LEKADLVDIRKEAGVQDPYWTPPPGWKPGDNPSQDPVCAREIKELREEIAKIKGEM 433 >ref|NP_568757.2| protein SWITCH1 (protein DYAD) [Arabidopsis thaliana] gi|334302786|sp|Q9FGN8.2|DYAD_ARATH RecName: Full=Protein DYAD; AltName: Full=Protein SWITCH 1 gi|332008684|gb|AED96067.1| protein SWITCH1 (protein DYAD) [Arabidopsis thaliana] Length = 639 Score = 75.1 bits (183), Expect = 6e-12 Identities = 30/53 (56%), Positives = 44/53 (83%) Frame = +1 Query: 157 LESADLVNVQKEAGVKYPDWKPPPRWTTGDNPSQEPDCASELKLLKEEMANIR 315 LES+DL++++KEAGVK P W PPP W GDNPSQ+P CA E++ ++EE+A+++ Sbjct: 375 LESSDLIHIRKEAGVKDPYWTPPPGWKLGDNPSQDPVCAGEIRDIREELASLK 427 >gb|AAL13233.1| SWITCH1 splice variant S [Arabidopsis thaliana] Length = 578 Score = 75.1 bits (183), Expect = 6e-12 Identities = 30/53 (56%), Positives = 44/53 (83%) Frame = +1 Query: 157 LESADLVNVQKEAGVKYPDWKPPPRWTTGDNPSQEPDCASELKLLKEEMANIR 315 LES+DL++++KEAGVK P W PPP W GDNPSQ+P CA E++ ++EE+A+++ Sbjct: 314 LESSDLIHIRKEAGVKDPYWTPPPGWKLGDNPSQDPVCAGEIRDIREELASLK 366 >gb|AAL73988.1|AF466153_1 DYAD [Arabidopsis thaliana] gi|9759279|dbj|BAB09744.1| unnamed protein product [Arabidopsis thaliana] gi|16033411|gb|AAL13232.1| SWITCH1 splice variant L [Arabidopsis thaliana] Length = 635 Score = 75.1 bits (183), Expect = 6e-12 Identities = 30/53 (56%), Positives = 44/53 (83%) Frame = +1 Query: 157 LESADLVNVQKEAGVKYPDWKPPPRWTTGDNPSQEPDCASELKLLKEEMANIR 315 LES+DL++++KEAGVK P W PPP W GDNPSQ+P CA E++ ++EE+A+++ Sbjct: 371 LESSDLIHIRKEAGVKDPYWTPPPGWKLGDNPSQDPVCAGEIRDIREELASLK 423 >ref|XP_002865854.1| hypothetical protein ARALYDRAFT_495204 [Arabidopsis lyrata subsp. lyrata] gi|297311689|gb|EFH42113.1| hypothetical protein ARALYDRAFT_495204 [Arabidopsis lyrata subsp. lyrata] Length = 587 Score = 72.4 bits (176), Expect = 4e-11 Identities = 28/53 (52%), Positives = 44/53 (83%) Frame = +1 Query: 157 LESADLVNVQKEAGVKYPDWKPPPRWTTGDNPSQEPDCASELKLLKEEMANIR 315 LES+DL++++KEAGV+ P W PPP W GDNP+Q+P CA E++ ++EE+A+++ Sbjct: 323 LESSDLIHIRKEAGVEDPYWTPPPGWKIGDNPTQDPVCAGEIRDIREELASLK 375