BLASTX nr result

ID: Coptis23_contig00023983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00023983
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303485.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|NP_568757.2| protein SWITCH1 (protein DYAD) [Arabidopsis tha...    75   6e-12
gb|AAL13233.1| SWITCH1 splice variant S [Arabidopsis thaliana]         75   6e-12
gb|AAL73988.1|AF466153_1 DYAD [Arabidopsis thaliana] gi|9759279|...    75   6e-12
ref|XP_002865854.1| hypothetical protein ARALYDRAFT_495204 [Arab...    72   4e-11

>ref|XP_002303485.1| predicted protein [Populus trichocarpa] gi|222840917|gb|EEE78464.1|
           predicted protein [Populus trichocarpa]
          Length = 830

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/56 (60%), Positives = 43/56 (76%)
 Frame = +1

Query: 157 LESADLVNVQKEAGVKYPDWKPPPRWTTGDNPSQEPDCASELKLLKEEMANIRN*M 324
           LE ADLV+++KEAGV+ P W PPP W  GDNPSQ+P CA E+K L+EE+A I+  M
Sbjct: 378 LEKADLVDIRKEAGVQDPYWTPPPGWKPGDNPSQDPVCAREIKELREEIAKIKGEM 433


>ref|NP_568757.2| protein SWITCH1 (protein DYAD) [Arabidopsis thaliana]
           gi|334302786|sp|Q9FGN8.2|DYAD_ARATH RecName:
           Full=Protein DYAD; AltName: Full=Protein SWITCH 1
           gi|332008684|gb|AED96067.1| protein SWITCH1 (protein
           DYAD) [Arabidopsis thaliana]
          Length = 639

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 30/53 (56%), Positives = 44/53 (83%)
 Frame = +1

Query: 157 LESADLVNVQKEAGVKYPDWKPPPRWTTGDNPSQEPDCASELKLLKEEMANIR 315
           LES+DL++++KEAGVK P W PPP W  GDNPSQ+P CA E++ ++EE+A+++
Sbjct: 375 LESSDLIHIRKEAGVKDPYWTPPPGWKLGDNPSQDPVCAGEIRDIREELASLK 427


>gb|AAL13233.1| SWITCH1 splice variant S [Arabidopsis thaliana]
          Length = 578

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 30/53 (56%), Positives = 44/53 (83%)
 Frame = +1

Query: 157 LESADLVNVQKEAGVKYPDWKPPPRWTTGDNPSQEPDCASELKLLKEEMANIR 315
           LES+DL++++KEAGVK P W PPP W  GDNPSQ+P CA E++ ++EE+A+++
Sbjct: 314 LESSDLIHIRKEAGVKDPYWTPPPGWKLGDNPSQDPVCAGEIRDIREELASLK 366


>gb|AAL73988.1|AF466153_1 DYAD [Arabidopsis thaliana] gi|9759279|dbj|BAB09744.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|16033411|gb|AAL13232.1| SWITCH1 splice variant L
           [Arabidopsis thaliana]
          Length = 635

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 30/53 (56%), Positives = 44/53 (83%)
 Frame = +1

Query: 157 LESADLVNVQKEAGVKYPDWKPPPRWTTGDNPSQEPDCASELKLLKEEMANIR 315
           LES+DL++++KEAGVK P W PPP W  GDNPSQ+P CA E++ ++EE+A+++
Sbjct: 371 LESSDLIHIRKEAGVKDPYWTPPPGWKLGDNPSQDPVCAGEIRDIREELASLK 423


>ref|XP_002865854.1| hypothetical protein ARALYDRAFT_495204 [Arabidopsis lyrata subsp.
           lyrata] gi|297311689|gb|EFH42113.1| hypothetical protein
           ARALYDRAFT_495204 [Arabidopsis lyrata subsp. lyrata]
          Length = 587

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 28/53 (52%), Positives = 44/53 (83%)
 Frame = +1

Query: 157 LESADLVNVQKEAGVKYPDWKPPPRWTTGDNPSQEPDCASELKLLKEEMANIR 315
           LES+DL++++KEAGV+ P W PPP W  GDNP+Q+P CA E++ ++EE+A+++
Sbjct: 323 LESSDLIHIRKEAGVEDPYWTPPPGWKIGDNPTQDPVCAGEIRDIREELASLK 375


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